BAC Information

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BAC

Clone NameB6Ng01-157I10
Chromosome14 (Build37)
Map Location 66,894,214 - 67,015,480
singlet/doubletdoublet
Overlap genePtk2b, Trim35, Stmn4
Upstream geneFbxo16, Zfp395, Pnoc, Elp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, LOC100043676
Downstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I10.bB6Ng01-157I10.g
ACCDH951736DH951737
length1,104925
definitionDH951736|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I10, 5' end.DH951737|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,014,340 - 67,015,480)(66,894,214 - 66,895,134)
sequence
gaattctcagctcctccagtgccatgtctgcctagatacaccttgatgat
aatagactgaacctctgaacctgtaagcaagccccaattaaatgtagtta
taaataagagttgtcttggtcatggtgtctcttcacatcaatgaaaccct
aatgtagcatgattaaatctatggcaagttgaagtgagaaatgctgtgat
cccatttggatgcattcaaggacagtatgagaggctgtcattcagggtaa
tagtgttaaaagcaggaaagacttatccaatcattgatctcacctcaggg
actttgcacatattcatccttttgcccagcatgctagtctttgagataat
tgtaatcctgcctcctctatttccttcaaatctgtcacaatccgggagac
ttcctccagctggcccacttactctaacttttccctggtaacaggcctct
ttttttgcctgaagatttttttttttagtctattcttttggggctgaaga
ggtgactcagtggttaacagccttggttgttctttttgaagacccacgtt
caattccgtgcacccacatgcagcccacaactgtctgtaactccagttcc
agagatgtgataccctcacatcaatgcatattttaaaaaattgttaaatc
tattctttgaaaaaattcatacaggtatacaatgtgtcatgaacatgcct
acctccacttcttctctctagatccccctaggccacttaatacatttttc
tggagctgggttacaggtggctatgaattgcatagcatacgcactgaata
ggactgaacgcaggacctctggcagactaacaatgtgagagaacttctag
agttactttggctggctgacttcttgctgtgataatctgaatgagatgca
acatctgtctttgttcactaagacttgcattttcctgccagatcctccat
ttctgcatagtctcaaagactacctagcctaaggaatgactagtcaaaaa
taactgagtacataacttcatcacataagcagttgcggcctgggttaact
tcctggattggttatcttggtgttgcttcaatttaactgaaaaaacacac
ttgc
gaattcccagaggtgcccaccagtaagaccacctgagtctgtctgatcta
tctctcaaaacaaccaaactctaccctgtatcaatctgcccatggcatct
aggtagaaatgcatcaaaatgtgcagcttggagtctgctctcttaatcag
attgtcatctcgagtaataattataccttgagaaacagcagagtgactca
aaaggctgccccctcccctgccacctcctcacacagctcagagctttgca
tgccaaatgaaaaggcctagaaagaatagccaccatgttctgctgcctac
accactaaatggttcttcaagctccagggactgatgggtatcggtgggta
tcatctttcctggccaagagttgtacccagagcatgctggcttgggagtt
gggaagccaagataaaaactactgggtgtttgcctcatgcctctctgcgt
tgccgcctggggaatgctcttctcatgtcagaggtagtctatggcttcag
gaataggacagaaaaaagctgaggtggaacttattggagctcagaatgtg
tctgcctgtcatttgtgagagcctcaattctgtccccaaactgggggaaa
aaaattcttgggcatggtagtacatccctgaaagctcaggacttgtgggg
gagaggtgcaccaagtggagtggcgatggttgtctgaggccaggatgggg
tacacaggataactttatctcacaaaacttaaagcaaagcaggcatgaga
aaatggcacacctgatccatgcgttagagagactaagcttgttccgacta
gctggtcactccaaaacttggcttgctcctgcggctatgctagccacgcc
ctgttccgggcagaaggagcaagttcatgtaaatagacctgtggtggtcg
gcgggtgtcagctccacaaatctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67014340_67015480
seq2: B6Ng01-157I10.b_44_1147 (reverse)

seq1  GCAAGTGTGGTTTTTTTCAGTTAATTTTAAAGGCAAACAACACAAAGCAT  50
      |||||||||  ||||||||||||| ||       || |||||| ||| ||
seq2  GCAAGTGTG--TTTTTTCAGTTAAATT------GAAGCAACACCAAG-AT  41

seq1  AACCAATTCCAGGAAGTTAAACAATGACGACAAATGCTTATGTGGTGAGT  100
      |||||| ||||||||||||| | | | || ||| |||||||||| |||  
seq2  AACCAA-TCCAGGAAGTTAACCCAGGCCG-CAACTGCTTATGTGATGAAG  89

seq1  TTATGGTACACAGTATATGTTTGACTAAGTCCATTTCCTTTAGGCTAGGG  150
      |||| |||| |||| ||| ||||||| ||| ||||  | |||||||| ||
seq2  TTAT-GTACTCAGT-TATTTTTGACT-AGT-CATT--CCTTAGGCTA-GG  132

seq1  TAGTCTCTCAAGGACTTATGCAGAAATGGAGGAACTTGGCAGGGTACAAT  200
      |||||| | |  ||| ||||||||||||||||| | |||||||  | |||
seq2  TAGTCTTTGA--GAC-TATGCAGAAATGGAGGATC-TGGCAGG--AAAAT  176

seq1  GCAAGTCTTAATTGAAACAAAGACAGATGTTGGCATACTCATTCATGATT  250
      |||||||||| |   |||||||||||||||| |||| |||||||| ||||
seq2  GCAAGTCTTAGT--GAACAAAGACAGATGTT-GCAT-CTCATTCA-GATT  221

seq1  AATCACAAGCAAGAAGTCAGCCAGCCAAAGTTAACTCTAGAAGTTCTCCT  300
       ||||| ||||||||||||||||||||||| |||||||||||||||| ||
seq2  -ATCAC-AGCAAGAAGTCAGCCAGCCAAAG-TAACTCTAGAAGTTCT-CT  267

seq1  CACACTTGTTAGTCTTGCAGAGGACCTGAGTTCAGTTCCTAATTCAGTGC  350
      |||| ||||||||||  |||||| |||| |||||| |||| |||||||||
seq2  CACA-TTGTTAGTCTGCCAGAGGTCCTGCGTTCAG-TCCT-ATTCAGTGC  314

seq1  CTATGCTATGCAATTCATAGCCACCTGTAACCCCAGCTCCAGAAAAATGT  400
       ||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTATGCTATGCAATTCATAGCCACCTGTAA-CCCAGCTCCAGAAAAATGT  363

seq1  ATTAAGTGGCCTAGGGGGATCTAGAGAGAAGAAGTGGAGGTAGGCATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGGCCTAGGGGGATCTAGAGAGAAGAAGTGGAGGTAGGCATGTT  413

seq1  CATGACACATTGTATACCTGTATGAATTTTTTCAAAGAATAGATTTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACACATTGTATACCTGTATGAATTTTTTCAAAGAATAGATTTAACA  463

seq1  ATTTTTTAAAATATGCATTGGTGCGAGGGTATCACATCCCTGGAACTGGA  550
      |||||||||||||||||||| || |||||||||||||| |||||||||||
seq2  ATTTTTTAAAATATGCATTGATGTGAGGGTATCACATCTCTGGAACTGGA  513

seq1  GTTACAGACAGTTGTGGGCTGCATGTGGGTGCACGGAATTGAACCTGGGT  600
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTTACAGACAGTTGTGGGCTGCATGTGGGTGCACGGAATTGAACGTGGGT  563

seq1  CTTCAAAAAGAACAACCAATGCTGTTAACCACTGAGTCACCTCTTCAGCC  650
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCAAAAAGAACAACCAAGGCTGTTAACCACTGAGTCACCTCTTCAGCC  613

seq1  CCAAAAGAATAGACTAAAAAAAAAAATCATCAGGCAAAAAAAGAGGCCTG  700
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAAAAGAATAGACTAAAAAAAAAAATCTTCAGGCAAAAAAAGAGGCCTG  663

seq1  TTACCAGGGAAAAGTTAGAGTAAGTGGGCCAGCTGGAGGAAGTCTCCCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGGGAAAAGTTAGAGTAAGTGGGCCAGCTGGAGGAAGTCTCCCGG  713

seq1  ATTGTGACAGATTTGAAGGAAATAGAGGAGGCAGGATTACAATTATCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACAGATTTGAAGGAAATAGAGGAGGCAGGATTACAATTATCTCA  763

seq1  AAGACTAGCATGCTGGGCAAAAGGATGAATATGTGCAAAGTCCCTGAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAGCATGCTGGGCAAAAGGATGAATATGTGCAAAGTCCCTGAGGT  813

seq1  GAGATCAATGATTGGATAAGTCTTTCCTGCTTTTAACACTATTACCCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAATGATTGGATAAGTCTTTCCTGCTTTTAACACTATTACCCTGA  863

seq1  ATGACAGCCTCTCATACTGTCCTTGAATGCATCCAAATGGGATCACAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGCCTCTCATACTGTCCTTGAATGCATCCAAATGGGATCACAGCA  913

seq1  TTTCTCACTTCAACTTGCCATAGATTTAATCATGCTACATTAGGGTTTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACTTCAACTTGCCATAGATTTAATCATGCTACATTAGGGTTTCA  963

seq1  TTGATGTGAAGAGACACCATGACCAAGACAACTCTTATTTATAACTACAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGAAGAGACACCATGACCAAGACAACTCTTATTTATAACTACAT  1013

seq1  TTAATTGGGGCTTGCTTACAGGTTCAGAGGTTCAGTCTATTATCATCAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGGGCTTGCTTACAGGTTCAGAGGTTCAGTCTATTATCATCAAG  1063

seq1  GTGTATCTAGGCAGACATGGCACTGGAGGAGCTGAGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCTAGGCAGACATGGCACTGGAGGAGCTGAGAATTC  1104

seq1: chr14_66894214_66895134
seq2: B6Ng01-157I10.g_66_990

seq1  GAATTCAGAGAGGTGCCCACCAGTAAGACCACCTGAGTCTGTCTGATCTA  50
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGGTGCCCACCAGTAAGACCACCTGAGTCTGTCTGATCTA  50

seq1  TCTCTCAAAACAACCAAACTCTACCCTGTATCAATCTGCCCATGGCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAAAACAACCAAACTCTACCCTGTATCAATCTGCCCATGGCATCT  100

seq1  AGGTAGAAATGCATCAAAATGTGCAGCTTGGAGTCTGCTCTCTTAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAAATGCATCAAAATGTGCAGCTTGGAGTCTGCTCTCTTAATCAG  150

seq1  ATTGTCATCTCGAGTAATAATTATACCTTGAGAAACAGCAGAGTGACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATCTCGAGTAATAATTATACCTTGAGAAACAGCAGAGTGACTCA  200

seq1  AAAGGCTGCCCCCTCCCCTGCCACCTCCTCACACAGCTCAGAGCTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGCCCCCTCCCCTGCCACCTCCTCACACAGCTCAGAGCTTTGCA  250

seq1  TGCCAAATGAAAAGGCCTAGAAAGAATAGCCACCATGTTCTGCTGCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAATGAAAAGGCCTAGAAAGAATAGCCACCATGTTCTGCTGCCTAC  300

seq1  ACCACTAAATGGTTCTTCAAGCTCCAGGGACTGATGGGTATCGGTGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAAATGGTTCTTCAAGCTCCAGGGACTGATGGGTATCGGTGGGTA  350

seq1  TCATCTTTCCTGGCCAAGAGTTGTACCCAGAGCATGCTGGCTTGGGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTCCTGGCCAAGAGTTGTACCCAGAGCATGCTGGCTTGGGAGTT  400

seq1  GGGAAGCCAAGATAAAAACTACTGGGTGTTTGCCTCATGCCTCTCTGCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCCAAGATAAAAACTACTGGGTGTTTGCCTCATGCCTCTCTGCGT  450

seq1  TGCCGCCTGGGGAATGCTCTTCTCATGTCAGAGGTAGTCTATGGCTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCCTGGGGAATGCTCTTCTCATGTCAGAGGTAGTCTATGGCTTCAG  500

seq1  GAATAGGACAGAAAAAAGCTGAGGTGGAACTCATTGGAGCTCAGAGTGTG  550
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  GAATAGGACAGAAAAAAGCTGAGGTGGAACTTATTGGAGCTCAGAATGTG  550

seq1  TCTGCCTGTCATTTGTGAGAGCCTCAATTCTGTCCCCAAACTGGGGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGTCATTTGTGAGAGCCTCAATTCTGTCCCCAAACTGGGGGAAA  600

seq1  AAAATTCTTGGGCATGGTAGTACATCCCTGAAAGCTCAGGACTTGT-GGG  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAATTCTTGGGCATGGTAGTACATCCCTGAAAGCTCAGGACTTGTGGGG  650

seq1  GAGAGGTGCAGCAGGTGGAGTGGCGATGGTTGTCTGAGGCCAAGATGGGG  699
      |||||||||| || |||||||||||||||||||||||||||| |||||||
seq2  GAGAGGTGCACCAAGTGGAGTGGCGATGGTTGTCTGAGGCCAGGATGGGG  700

seq1  TACACAGGATAACCTTATCTCAGAAAACTTAAAGCAGAAGCAGGCAGGAG  749
      ||||||||||||| |||||||| ||||||||||||| ||||||||| |||
seq2  TACACAGGATAACTTTATCTCACAAAACTTAAAGCA-AAGCAGGCATGAG  749

seq1  -AAATGGCACAGCTGATCCATGCGGCGGAGAGACTAAGCTTGTACCG-CT  797
       |||||||||| ||||||||||||   |||||||||||||||| ||| ||
seq2  AAAATGGCACACCTGATCCATGCGTTAGAGAGACTAAGCTTGTTCCGACT  799

seq1  TGCTGGTCAC-CCTAAGCTAGGCTTGCTCCTGCGGCT-TGCTAGCCACGC  845
       ||||||||| || || || ||||||||||||||||| ||||||||||||
seq2  AGCTGGTCACTCCAAAACTTGGCTTGCTCCTGCGGCTATGCTAGCCACGC  849

seq1  CCTG-GCCGGGCAGAATGAGCAAGTTCATGGTAAATGAACCTGTGGTGGT  894
      ||||  |||||||||| |||||||||||| ||||||  ||||||||||||
seq2  CCTGTTCCGGGCAGAAGGAGCAAGTTCAT-GTAAATAGACCTGTGGTGGT  898

seq1  CGGC-GGTGTCAGCTCAACAGAATCTAA  921
      |||| ||||||||||| ||| |||||||
seq2  CGGCGGGTGTCAGCTCCACA-AATCTAA  925