BAC Information

Click to search

BAC

Clone NameB6Ng01-157O03
Chromosome14 (Build37)
Map Location 81,718,367 - 81,719,356
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157O03.bB6Ng01-157O03.g
ACCDH951994DH951995
length817987
definitionDH951994|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O03, 5' end.DH951995|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacatcaaaccagatacactgaatttaatagaagattaaattgg
aaatagctttgaatgcattggtgcaggagacaatggctcggggtctaaaa
tcaaaaaatgataaatgggaccacaggacactgtcaataggacaaaaggg
cagggtacatattgggaaacgatcttccctaaccctacacctgacagagg
gccaatatacaaaatatatgaagaactcaagaagttagattccaaaaaaa
ttgaataaataaataaataaataaataaataaaatggggtatagagtcaa
attgagaaccttaaacagattaatctcaaatgcatgagaagcatttaaag
taatgtgcaacatccttcatcatcaggaaaatgtaaatcaaaacaaccca
gagatttctccttataacaatcagactggctaagatgaacatgctcaaga
atatgtgaaaaaagggaacactactggtgagattcaaacttgtaaaacca
ctctcagaatcaatctggtagcttctccaaaaattggaaagaattttgtc
tgaagatgtagctatacagctcctagagcgtatacccagaagatcctcca
ccataccacaaggatacattctccattatgttcatcacagctttttttgc
aatagctacacactcaatcaaacatagatgtccgtcaactgaacaaggtg
atggatacaaaaaaaaaatgtggtacatttactgaatgaaatactgaaag
aaaaaaggatagaaagaaagaagagcaaaggaaaggagaggagaggagag
gagaggagaggagagga

gaattcatgtgccatggcgttctgggtccaggagaatagtctctgtagca
tagaacatacagcaaggattaatagttaccaagaaagttaactatctcag
catttcatcagaagcatttaataacatgcttaaaagtggtctgagacaat
aatttcaaacctgaagccttatcaaggaatgacacagcagggtttctatt
gatgtagcactcaatttagccactcccctatgctgtcattctatcttcac
agataacatttgtaagatgcatagaagttaagtattgaacatccagtcag
ggaatccaatatgatcttcaaagcaaacatacaacatcttggtattcttt
ataaattgtgaaccttcttttaaggctacctttattttcctatcttccat
aaaattctcagtgatctgatatactttatttaaatatacatagatccata
ctggtcagggccaccccgccatcttccttcctaagggctttcttcctaag
ggctccagagtgcttttcactccacaggacctcaggatcacaggtgaatg
gaaagcaacatcagctccaaagaatggcagagggtcttgtgccagcagga
acagggacaaaggaccagattagaggctgggattcattcaggtcggggac
agccccaccatcatctgcatgaaccccatggaaggcatctaggacaccag
aggactctccacgccacaggacccctagcacacccaggatctcctgatca
cctgagagcatgtgggcaatagaaacaacagagctccttggtcagggtcc
attccagccttcattgtcaggcaggaggcagagctgaggcccagaaccct
gggcacattccttgccagaggagagttggcctacagggagggttctgacc
ccagaatcaggaggtggatcagagctcagactgctggacacctgccctat
agactagagcttgcctgcagagagtgctctgatcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81718367_81719356
seq2: B6Ng01-157O03.g_68_1054

seq1  GAATTCATGTGCCATGGCGTTCTGGGTCCAGGAGAATAGTCTCTGTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGCCATGGCGTTCTGGGTCCAGGAGAATAGTCTCTGTAGCA  50

seq1  TAGAACATACAGCAAGGATTAATAGTTACCAAGAAAGTTAACTATCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATACAGCAAGGATTAATAGTTACCAAGAAAGTTAACTATCTCAG  100

seq1  CATTTCATCAGAAGCATTTAATAACATGCTTAAAAGTGGTCTGAGACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATCAGAAGCATTTAATAACATGCTTAAAAGTGGTCTGAGACAAT  150

seq1  AATTTCAAACCTGAAGCCTTATCAAGGAATGACACAGCAGGGTTTCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAACCTGAAGCCTTATCAAGGAATGACACAGCAGGGTTTCTATT  200

seq1  GATGTAGCACTCAATTTAGCCACTCCCCTATGCTGTCATTCTATCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGCACTCAATTTAGCCACTCCCCTATGCTGTCATTCTATCTTCAC  250

seq1  AGATAACATTTGTAAGATGCATAGAAGTTAAGTATTGAACATCCAGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACATTTGTAAGATGCATAGAAGTTAAGTATTGAACATCCAGTCAG  300

seq1  GGAATCCAATATGATCTTCAAAGCAAACATACAACATCTTGGTATTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCAATATGATCTTCAAAGCAAACATACAACATCTTGGTATTCTTT  350

seq1  ATAAATTGTGAACCTTCTTTTAAGGCTACCTTTATTTTCCTATCTTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGTGAACCTTCTTTTAAGGCTACCTTTATTTTCCTATCTTCCAT  400

seq1  AAAATTCTCAGTGATCTGATATACTTTATTTAAATATACATAGATCCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTCAGTGATCTGATATACTTTATTTAAATATACATAGATCCATA  450

seq1  CTGGTCAGGGCCACCCCGCCATCTTCCTTCCTAAGGGCTTTCTTCCTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAGGGCCACCCCGCCATCTTCCTTCCTAAGGGCTTTCTTCCTAAG  500

seq1  GGCTCCAGAGTGCTTTTCACTCCACAGGACCTCAGGATCACAGGTGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGAGTGCTTTTCACTCCACAGGACCTCAGGATCACAGGTGAATG  550

seq1  GAAAGCAACATCAGCTCCAAAGAATGGCAGAGGGTCTTGTGCCAGCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAACATCAGCTCCAAAGAATGGCAGAGGGTCTTGTGCCAGCAGGA  600

seq1  ACAGGGACAAAGGACCAGATTAGAGGCTGGGATTCATTCAGGTCGGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGACAAAGGACCAGATTAGAGGCTGGGATTCATTCAGGTCGGGGAC  650

seq1  AGCCCCACCATCATCTGCATGAACCCCATGGAAGGCATCTAGGACACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCACCATCATCTGCATGAACCCCATGGAAGGCATCTAGGACACCAG  700

seq1  AGGACTCTCCACGCCACAGGACCCCTAGCACACCCAGGATCTCCTGATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTCCACGCCACAGGACCCCTAGCACACCCAGGATCTCCTGATCA  750

seq1  CCTGAGAGCATGTGGGCAATAGAAACAACAGAGCTCCTTGGTCAGGGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGCATGTGGGCAATAGAAACAACAGAGCTCCTTGGTCAGGGTCC  800

seq1  ATTCCAGCCTTCATTGTCAGGCAGGAGGCAGAGCTGAGGCCCAGAACCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGCCTTCATTGTCAGGCAGGAGGCAGAGCTGAGGCCCAGAACCCT  850

seq1  GGGCACATTCCTTGCCAGAGGAGAGTTGGCCTACAGGGAGGGTTCTGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACATTCCTTGCCAGAGGAGAGTTGGCCTACAGGGAGGGTTCTGACC  900

seq1  CCAGAAATCAGGAGGTGGATCAGAGCTCCAGACTGCTGGACACCTGCCCT  950
      |||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCAG-AATCAGGAGGTGGATCAGAGCT-CAGACTGCTGGACACCTGCCCT  948

seq1  ATAAGACTAGAGCTTGCCTGCAGAGAGTGCTCTGATCACT  990
      || |||||||||||||||||||||||||||||||||||||
seq2  AT-AGACTAGAGCTTGCCTGCAGAGAGTGCTCTGATCACT  987


| Home | SequenceCutter | Blast | Download |