BAC Information

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BAC

Clone NameB6Ng01-158H23
Chromosome14 (Build37)
Map Location 51,983,520 - 52,074,468
singlet/doubletdoublet
Overlap geneEG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10
Upstream geneOlfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238
Downstream geneLOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158H23.bB6Ng01-158H23.g
ACCDH952431DH952432
length1,2101,106
definitionDH952431|Mus musculus domesticus DNA, BAC clone: B6Ng01-158H23, 5' end.DH952432|Mus musculus domesticus DNA, BAC clone: B6Ng01-158H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,073,249 - 52,074,468)(51,983,520 - 51,984,633)
sequence
gaattcatacacattgagcactatgatatgatacattttgtattcatcaa
aatcaataaatattgttttatctcaatgccatccttgaactagattacag
ttctattcagtaagactgctataaaataactttggtgttttaattccaca
gatacataaaagaacatgacttaaactacatatgaactacataacagatt
ctccttatcatttttattatttaaatgcattttatacatcaacatcttaa
tattattgaatattttgagactcaaacaatatatctaaattttgttcaac
ttttatattcctattcttttataccagaaagtatcattaatacatattta
ataacacccataactgaggatcctatgcctaatgttgattagtaaattgt
ttcaaaccatataaaatactctttgggaattaagcatagtaaaagatccc
aaaattttaaaaagtggatcattaagaaatatattcaacagcccttctta
gataacacccgatattcaacagcccttcttagataacacctgacatagtc
tgagagtatccaaaattacaatacattatctgtgtagactgtctaacaat
cagtttacctaaagaagattatcagtgtttctcgtagaaaaattatttta
tgagtaagaatattttacatagttccaaataacaaaagctctttgaactt
aaacactaaaaaatgctaatttcattcacagtaagaaaattatgaataat
attctagaacatgttttatatttgttttctatatttgtagatcacgcttt
taatatttacaactgttactatcatcaatcaaattaattattttaagata
catctaatttaattttatttatccatttcaaatatacaaatgatttaata
taccatataaccagaatattatctgttaggcccttttgcatatcaattat
gtaaccttttagtgtgttgttactacttctattctgtaaaaaatagtatc
agaattcttttaatacctgagtcttcctaattctttgagattctttatgt
gatgtctgagcacagaagatctttctcctatcccagcatagtttcagtca
tctgttcctgttagcctaatccctctcatcgaagtaaaacacaaaatgga
cttttgctgaatggcatttttcattgagaaattggactactttttttttc
tatctagaaa
gaattcactcaggtggtatatttcttattgagaaatagctcttatattca
ctgtccctagagatttgggtgctaacaaaaatctcttatgcatgtcagtg
tcctaatcaatgcttcccatcgaaagcacttgtcttctaatgaagcagat
gagaaatctctgaatttagaaagagattttgccatagggtatttgccagg
tcacaggagaggctccaggaaatgcacaacagaaacttgtcaatttgggg
aaaactagttatcaaataggccttagcctttcccagtgacatcatcagta
atgccttccttggaaaatctcctgtatctaggagagaactagaatcttct
gtgatgtcacttgtgttgtggttacaacaactgcttgtgggatattcctt
cagtgtcttttgggttctcaatcaggcatgttttcctgcttgctcaggca
atttcacagggagaatggcgatcaaggagagaccagaccaaggcagaagg
aatctggcatcctttcttgtaaaaacagaagaatgaaatcattctgtgga
aggcacagtgagtcctgggcagagttggggaaattctggaacaggtaggc
ttgagctgagcattccctgagtagatattaagagctggagccttggactt
tcttttttttgttttgttttgtttttcgagacagggtttctctgtatagc
cctggctgtcctggagctcactttgtagaccaggctggcctcgaactcag
aaatccgcctgcctctgcctcccgagtgctgggattaaaggcgtgtgcca
ccacacctggctccttggactttcttaatgacagaccaagagattagaat
ttctgacaattcatttgacagaggcaggaattgacaagcctgcagctact
tttctgggaactatttaatttcatttagagtgtcaaagtcttcctgagaa
ggcactatgagaataacatgtgtcacttattggcaagtagtgaagcactc
atctcctagaatatataggatacatgagtctctgatgcaaagaacagagg
aggatctaacctggtcattggtgaggtttcagcccactttgagttgaacc
acatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52073249_52074468
seq2: B6Ng01-158H23.b_47_1256 (reverse)

seq1  TTTCTAGATTAGAAAAAAAAAGTTAGTGCCAATCTCTCAATTGAAAAATG  50
      |||||||| ||||||||||||| |||| ||||| |||||| |||||||||
seq2  TTTCTAGA-TAGAAAAAAAAAG-TAGT-CCAATTTCTCAA-TGAAAAATG  46

seq1  CAAATTTCAGCAAAAGACCATTTTTGGTGTTTTTACTTCTGATGAGAGGG  100
      | |  ||||||||||| |||||||  ||| ||||||||| ||||||||||
seq2  CCA--TTCAGCAAAAGTCCATTTT--GTG-TTTTACTTC-GATGAGAGGG  90

seq1  AATA-GCTAACAGGAACAGATGAACTGAAAACTATGCTGGGATA-GAG-A  147
      | || ||||||||||||||||| |||| |||||||||||||||| ||| |
seq2  ATTAGGCTAACAGGAACAGATG-ACTG-AAACTATGCTGGGATAGGAGAA  138

seq1  AGATC-TCTGTGCTCAGACATCACATAAAGAATCTCAAAGAATTAGGAAG  196
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTCTGTGCTCAGACATCACATAAAGAATCTCAAAGAATTAGGAAG  188

seq1  ACTCAGGTATTAAAAGAATTCTGATACTATTTTTTACAGAATAGAAGTAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTATTAAAAGAATTCTGATACTATTTTTTACAGAATAGAAGTAG  238

seq1  TAACAACACACTAAAAGGTTACATAATTGATATGCAAAAGGGCCTAACAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACACACTAAAAGGTTACATAATTGATATGCAAAAGGGCCTAACAG  288

seq1  ATAATATTCTGGTTATATGGTATATTAAATCATTTTGTATATTTTGAAAT  346
      |||||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  ATAATATTCTGGTTATATGGTATATTAAATCA-TTTGTATA-TTTGAAAT  336

seq1  GGATAAATAAAATTAAATTAGATGTATCTTAAAATAATTAATTTGATTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAATAAAATTAAATTAGATGTATCTTAAAATAATTAATTTGATTGA  386

seq1  TGATAGTAACAGTTGTAAATATTAAAAGCGTGATCTACAAATATAGAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTAACAGTTGTAAATATTAAAAGCGTGATCTACAAATATAGAAAA  436

seq1  CAAATATAAAACATGTTCTAGAATATTATTCATAATTTTCTTACTGTGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAAAACATGTTCTAGAATATTATTCATAATTTTCTTACTGTGAA  486

seq1  TGAAATTAGCATTTTTTAGTGTTTAAGTTCAAAGAGCTTTTGTTATTTGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAGCATTTTTTAGTGTTTAAGTTCAAAGAGCTTTTGTTATTTGG  536

seq1  AACTATGTAAAATATTCTTACTCATAAAATAATTTTTCTACGAGAAACAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTAAAATATTCTTACTCATAAAATAATTTTTCTACGAGAAACAC  586

seq1  TGATAATCTTCTTTAGGTAAACTGATTGTTAGACAGTCTACACAGATAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCTTCTTTAGGTAAACTGATTGTTAGACAGTCTACACAGATAAT  636

seq1  GTATTGTAATTTTGGATACTCTCAGACTATGTCAGGTGTTATCTAAGAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTAATTTTGGATACTCTCAGACTATGTCAGGTGTTATCTAAGAAG  686

seq1  GGCTGTTGAATATCGGGTGTTATCTAAGAAGGGCTGTTGAATATATTTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTGAATATCGGGTGTTATCTAAGAAGGGCTGTTGAATATATTTCT  736

seq1  TAATGATCCACTTTTTAAAATTTTGGGATCTTTTACTATGCTTAATTCCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATCCACTTTTTAAAATTTTGGGATCTTTTACTATGCTTAATTCCC  786

seq1  AAAGAGTATTTTATATGGTTTGAAACAATTTACTAATCAACATTAGGCAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTATTTTATATGGTTTGAAACAATTTACTAATCAACATTAGGCAT  836

seq1  AGGATCCTCAGTTATGGGTGTTATTAAATATGTATTAATGATACTTTCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTCAGTTATGGGTGTTATTAAATATGTATTAATGATACTTTCTG  886

seq1  GTATAAAAGAATAGGAATATAAAAGTTGAACAAAATTTAGATATATTGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAAGAATAGGAATATAAAAGTTGAACAAAATTTAGATATATTGTT  936

seq1  TGAGTCTCAAAATATTCAATAATATTAAGATGTTGATGTATAAAATGCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTCAAAATATTCAATAATATTAAGATGTTGATGTATAAAATGCAT  986

seq1  TTAAATAATAAAAATGATAAGGAGAATCTGTTATGTAGTTCATATGTAGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATAAAAATGATAAGGAGAATCTGTTATGTAGTTCATATGTAGT  1036

seq1  TTAAGTCATGTTCTTTTATGTATCTGTGGAATTAAAACACCAAAGTTATT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCATGTTCTTTTATGTATCTGTGGAATTAAAACACCAAAGTTATT  1086

seq1  TTATAGCAGTCTTACTGAATAGAACTGTAATCTAGTTCAAGGATGGCATT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCAGTCTTACTGAATAGAACTGTAATCTAGTTCAAGGATGGCATT  1136

seq1  GAGATAAAACAATATTTATTGATTTTGATGAATACAAAATGTATCATATC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAACAATATTTATTGATTTTGATGAATACAAAATGTATCATATC  1186

seq1  ATAGTGCTCAATGTGTATGAATTC  1220
      ||||||||||||||||||||||||
seq2  ATAGTGCTCAATGTGTATGAATTC  1210

seq1: chr14_51983520_51984633
seq2: B6Ng01-158H23.g_68_1173

seq1  GAATTCACTCAGGTGGTATATTTCTTATTGAGAAATAGCTCTTATATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGGTGGTATATTTCTTATTGAGAAATAGCTCTTATATTCA  50

seq1  CTGTCCCTAGAGATTTGGGTGCTAACAAAAATCTCTTATGCATGTCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCTAGAGATTTGGGTGCTAACAAAAATCTCTTATGCATGTCAGTG  100

seq1  TCCTAATCAATGCTTCCCATCGAAAGCACTTGTCTTCTAATGAAGCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATCAATGCTTCCCATCGAAAGCACTTGTCTTCTAATGAAGCAGAT  150

seq1  GAGAAATCTCTGAATTTAGAAAGAGATTTTGCCATAGGGTATTTGCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATCTCTGAATTTAGAAAGAGATTTTGCCATAGGGTATTTGCCAGG  200

seq1  TCACAGGAGAGGCTCCAGGAAATGCACAACAGAAACTTGTCAATTTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAGAGGCTCCAGGAAATGCACAACAGAAACTTGTCAATTTGGGG  250

seq1  AAAACTAGTTATCAAATAGGCCTTAGCCTTTCCCAGTGACATCATCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAGTTATCAAATAGGCCTTAGCCTTTCCCAGTGACATCATCAGTA  300

seq1  ATGCCTTCCTTGGAAAATCTCCTGTATCTAGGAGAGAACTAGAATCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTCCTTGGAAAATCTCCTGTATCTAGGAGAGAACTAGAATCTTCT  350

seq1  GTGATGTCACTTGTGTTGTGGTTACAACAACTGCTTGTGGGATATTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCACTTGTGTTGTGGTTACAACAACTGCTTGTGGGATATTCCTT  400

seq1  CAGTGTCTTTTGGGTTCTCAATCAGGCATGTTTTCCTGCTTGCTCAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTTTTGGGTTCTCAATCAGGCATGTTTTCCTGCTTGCTCAGGCA  450

seq1  ATTTCACAGGGAGAATGGCGATCAAGGAGAGACCAGACCAAGGCAGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACAGGGAGAATGGCGATCAAGGAGAGACCAGACCAAGGCAGAAGG  500

seq1  AATCTGGCATCCTTTCTTGTAAAAACAGAAGAATGAAATCATTCTGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGCATCCTTTCTTGTAAAAACAGAAGAATGAAATCATTCTGTGGA  550

seq1  AGGCACAGTGAGTCCTGGGCAGAGTTGGGGAAATTCTGGAACAGGTAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGTGAGTCCTGGGCAGAGTTGGGGAAATTCTGGAACAGGTAGGC  600

seq1  TTGAGCTGAGCATTCCCTGAGTAGATATTAAGAGCTGGAGCCTTGGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGAGCATTCCCTGAGTAGATATTAAGAGCTGGAGCCTTGGACTT  650

seq1  TCTTTTTTTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTATAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTGTTTTGTTTTGTTTTTCGAGACAGGGTTTCTCTGTATAGC  700

seq1  CCTGGCTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCGAACTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCGAACTCAG  750

seq1  AAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCA  800

seq1  CCACACCTGGCTCCTTGGACTTTCTTAATGACAGACCAAGAGATTAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCTGGCTCCTTGGACTTTCTTAATGACAGACCAAGAGATTAGAAT  850

seq1  TTCTGACAATTCATTTGACAGAGGCAGGAATTGACAAGCCTGCAGCTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACAATTCATTTGACAGAGGCAGGAATTGACAAGCCTGCAGCTACT  900

seq1  TTTCTGGGAACTATTTAATTTCATTTAGAGTGTCAAAGTCTTCCCTGAGA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTCTGGGAACTATTTAATTTCATTTAGAGTGTCAAAGTCTT-CCTGAGA  949

seq1  AGGCACTATGAGAATAACAATGTGTCACTTATTGGCAAGTAGTTGAAGCA  1000
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  AGGCACTATGAGAATAAC-ATGTGTCACTTATTGGCAAGTAG-TGAAGCA  997

seq1  CTTCATCTTCTAGATTATTATAGGATACATGAGTCTCTGATGCAAAGAAC  1050
      | |||||| ||||| || ||||||||||||||||||||||||||||||||
seq2  C-TCATCTCCTAGAATA-TATAGGATACATGAGTCTCTGATGCAAAGAAC  1045

seq1  AGAGGAGGATTCTAACCTGGTCATTTGTTGAGGTTTCAG-CCACTTTGAG  1099
      ||||||||| ||||||||||||| ||| ||||||||||| ||||||||||
seq2  AGAGGAGGA-TCTAACCTGGTCA-TTGGTGAGGTTTCAGCCCACTTTGAG  1093

seq1  TTTGAACACACATGA  1114
       |||||| |||||||
seq2  -TTGAAC-CACATGA  1106