BAC Information

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BAC

Clone NameB6Ng01-158K10
Chromosome14 (Build37)
Map Location 28,784,334 - 28,942,633
singlet/doubletdoublet
Overlap geneErc2
Upstream geneHesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218, Cacna2d3, Lrtm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158K10.bB6Ng01-158K10.g
ACCDH952543DH952544
length1,116407
definitionDH952543|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K10, 5' end.DH952544|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,941,509 - 28,942,633)(28,784,334 - 28,784,746)
sequence
gaattctgccagttatggcttttctagcaatgctgatcaaatggaaccaa
ctgaacctgttaccaagacactgttcactgttcttcactgtgtcagtagc
agccctggttgtgatactgagctatcatagttttgcaaggcgtgactatg
ggatgtccttgaataaaggatgcatgagatctgttcctagtgtttcttaa
gactatgtgagactctgcgattacataagaacaaagtgtttaatcttcaa
agtttatcccatatagtaggaattgcttccaaaataaaacagctggtacc
actgtttggctggaagaaaacacagtcacagatggacaattaaactattc
tatgctggcaaggacaagtctttcctgaaaatgccatagctgagaagact
tcagtgtagagttagcacgttgtgaatgccttccattcttgagatagact
acatttccaggaagaagtaaagatcagtgacttgacgcctactgcatcac
tacatgaagccctaagaatcatgggaaaaaatgctcttgttgtgtcccat
tttcataaaaacaaacagtcacacacatatgtagatacattttaaatgca
ataggagttatgagtaatagaatactacatataaatgccacaagtagata
ctgatttccttatcataaccacccagctaagtgaaaaaaaattacataat
acttttgtatactcaaatgtaatctattctccaaatgattggtgtgtgga
atggttagttcctcagtgggagaaaagtgaagtgtagacatgaactgccc
cagagaaatcttccacttcagggtctcccttatttatgtttatagaagct
ttatgttgaccccattgctgtagaaggaaatccacccagatgggtctctg
gggcccaatatccccatcagtgatttggctccttctctcatagctgttac
tgctacatggaaaatcttcttaatagtaatttgggggaaatcacaatgta
gaaagaaagtctgggatgaagatgcccaactcaacagtcttcccacattt
aaaaaaaaaaaaaaaggatgggtatacgaacaccccaacaatgagactag
cctctctatatcagaa
ctaggacctacacccctcactttcctatgcttctgttactccataaatga
attctctactctttcctcttagagaacaggacaagtctctttttgatgta
tccctgttctatcatgctggaccaggaacctaagtagtacactgtcttat
cttttacaaataaattgaagttaaattaattcttgaaactttaccaaagc
attaacaaacttttgtctagctctctcaggataatggctatttaattgat
tgtattgccaattcattcgtgtctctagctgcatatgtatcagaagatgg
cctagtcggccatcagtggaaagagaggcccattggtcttgcaaacttta
tatgcctcagtacaggggaatgccagggccaagaagtgggagtgtgtggg
gggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28941509_28942633
seq2: B6Ng01-158K10.b_48_1163 (reverse)

seq1  TTCTAGATAT-GAGAGGCTTGGTCTCATTGTTGTGGTGTTTCGTATACCC  49
      |||| ||||| ||||||| | |||||||||||| |||| |||||||||||
seq2  TTCT-GATATAGAGAGGC-TAGTCTCATTGTTGGGGTG-TTCGTATACCC  47

seq1  ATCCTTTTTTTTTTTTTTTTAAATGTGGGAAGAACTGTTGGGTTGGGCAT  99
      |||| ||||||||||||||||||||||||||| ||||||| |||||||||
seq2  ATCC-TTTTTTTTTTTTTTTAAATGTGGGAAG-ACTGTTGAGTTGGGCAT  95

seq1  CTTCATCCCAGACTTTCTTTCTACATTGTGATTTCCCCCAAAATTAACTA  149
      ||||||||||||||||||||||||||||||||||||||||||  | ||| 
seq2  CTTCATCCCAGACTTTCTTTCTACATTGTGATTTCCCCCAAA--TTACT-  142

seq1  ATTAAGAAGATTTTCCATGTAGCAGTAACAGCTATGAGAAGAAGGAGCCA  199
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTAAGAAGATTTTCCATGTAGCAGTAACAGCTATGAG-AGAAGGAGCCA  191

seq1  AATCACTGATGGGGATATTGGGCCCCAGAGACCCATCTGGGTGGATTTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGATGGGGATATTGGGCCCCAGAGACCCATCTGGGTGGATTTCC  241

seq1  TTCTACAGCAATGGGGTCAACATAAAGCTTCTATAAAACATAAATAAGGG  299
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCTACAGCAATGGGGTCAACATAAAGCTTCTAT-AAACATAAATAAGGG  290

seq1  AGACCCTGAAGTGGAAGATTTCTCTGGGGCAGTTCATGTCTACACTTCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTGAAGTGGAAGATTTCTCTGGGGCAGTTCATGTCTACACTTCAC  340

seq1  TTTTCTCCCACTGAGGAACTAACCATTCCACACACCAATCATTTGGAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCCACTGAGGAACTAACCATTCCACACACCAATCATTTGGAGAA  390

seq1  TAGATTACATTTGAGTATACAAAAGTATTATGTAATTTTTTTTCACTTAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTACATTTGAGTATACAAAAGTATTATGTAATTTTTTTTCACTTAG  440

seq1  CTGGGTGGTTATGATAAGGAAATCAGTATCTACTTGTGGCATTTATATGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGGTTATGATAAGGAAATCAGTATCTACTTGTGGCATTTATATGT  490

seq1  AGTATTCTATTACTCATAACTCCTATTGCATTTAAAATGTATCTACATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCTATTACTCATAACTCCTATTGCATTTAAAATGTATCTACATAT  540

seq1  GTGTGTGACTGTTTGTTTTTATGAAAATGGGACACAACAAGAGCATTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGACTGTTTGTTTTTATGAAAATGGGACACAACAAGAGCATTTTT  590

seq1  TCCCATGATTCTTAGGGCTTCATGTAGTGATGCAGTAGGCGTCAAGTCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGATTCTTAGGGCTTCATGTAGTGATGCAGTAGGCGTCAAGTCAC  640

seq1  TGATCTTTACTTCTTCCTGGAAATGTAGTCTATCTCAAGAATGGAAGGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTACTTCTTCCTGGAAATGTAGTCTATCTCAAGAATGGAAGGCA  690

seq1  TTCACAACGTGCTAACTCTACACTGAAGTCTTCTCAGCTATGGCATTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACGTGCTAACTCTACACTGAAGTCTTCTCAGCTATGGCATTTTC  740

seq1  AGGAAAGACTTGTCCTTGCCAGCATAGAATAGTTTAATTGTCCATCTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGACTTGTCCTTGCCAGCATAGAATAGTTTAATTGTCCATCTGTG  790

seq1  ACTGTGTTTTCTTCCAGCCAAACAGTGGTACCAGCTGTTTTATTTTGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTTTTCTTCCAGCCAAACAGTGGTACCAGCTGTTTTATTTTGGAA  840

seq1  GCAATTCCTACTATATGGGATAAACTTTGAAGATTAAACACTTTGTTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCCTACTATATGGGATAAACTTTGAAGATTAAACACTTTGTTCTT  890

seq1  ATGTAATCGCAGAGTCTCACATAGTCTTAAGAAACACTAGGAACAGATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATCGCAGAGTCTCACATAGTCTTAAGAAACACTAGGAACAGATCT  940

seq1  CATGCATCCTTTATTCAAGGACATCCCATAGTCACGCCTTGCAAAACTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATCCTTTATTCAAGGACATCCCATAGTCACGCCTTGCAAAACTAT  990

seq1  GATAGCTCAGTATCACAACCAGGGCTGCTACTGACACAGTGAAGAACAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTCAGTATCACAACCAGGGCTGCTACTGACACAGTGAAGAACAGT  1040

seq1  GAACAGTGTCTTGGTAACAGGTTCAGTTGGTTCCATTTGATCAGCATTGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTGTCTTGGTAACAGGTTCAGTTGGTTCCATTTGATCAGCATTGC  1090

seq1  TAGAAAAGCCATAACTGGCAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  TAGAAAAGCCATAACTGGCAGAATTC  1116

seq1: chr14_28784334_28784746
seq2: B6Ng01-158K10.g_68_480

seq1  GAATTCCTAGGACCTACACCCCTCACTTTCCTATGCTTCTGTTACTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGACCTACACCCCTCACTTTCCTATGCTTCTGTTACTCCAT  50

seq1  AAATGAATTCTCTACTCTTTCCTCTTAGAGAACAGGACAAGTCTCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTCTCTACTCTTTCCTCTTAGAGAACAGGACAAGTCTCTTTTT  100

seq1  GATGTATCCCTGTTCTATCATGCTGGACCAGGAACCTAAGTAGTACACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATCCCTGTTCTATCATGCTGGACCAGGAACCTAAGTAGTACACTG  150

seq1  TCTTATCTTTTACAAATAAATTGAAGTTAAATTAATTCTTGAAACTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTTTTACAAATAAATTGAAGTTAAATTAATTCTTGAAACTTTAC  200

seq1  CAAAGCATTAACAAACTTTTGTCTAGCTCTCTCAGGATAATGGCTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATTAACAAACTTTTGTCTAGCTCTCTCAGGATAATGGCTATTTA  250

seq1  ATTGATTGTATTGCCAATTCATTCGTGTCTCTAGCTGCATATGTATCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTGTATTGCCAATTCATTCGTGTCTCTAGCTGCATATGTATCAGA  300

seq1  AGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCTTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCCCATTGGTCTTGCAA  350

seq1  ACTTTATATGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTG  400

seq1  TGTGGGGGGGGAG  413
      |||||||||||||
seq2  TGTGGGGGGGGAG  413