BAC Information

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BAC

Clone NameB6Ng01-159K20
Chromosome14 (Build37)
Map Location 22,891,263 - 23,072,708
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159K20.bB6Ng01-159K20.g
ACCDH953273DH953274
length1,156774
definitionDH953273|Mus musculus domesticus DNA, BAC clone: B6Ng01-159K20, 5' end.DH953274|Mus musculus domesticus DNA, BAC clone: B6Ng01-159K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,071,547 - 23,072,708)(22,891,263 - 22,892,038)
sequence
gaattctttgatggaatagaactcagttttcaaaaatgtttgaaattaca
gcttgacctggtagctcatgcctataatcccagaatccaagaggccaaag
cagaaatagtgtccaagaattcaaggccaccttgagatacatagtaaatt
ccaggccaacacaatctatagagtgagaccctgcctcagacaaatacaga
cggggaacaagaagtcagtatatacaatcttgtgttacaacaaaaagaca
agacacaaactggggtgttagctcccatttcaacagaaggcattatgatt
ctgagaaaagacagatgtgtacaaataaaaatatgtatgcggcagaaata
aaagataattcttcatatctttctgtctgtttgatatacttcctctggtt
gtatttcagagtcctatgtcaattaaaaatatttcaaatgggctggagct
caggggatggagggtcagataaattttgttatacaaggacaggtagataa
atagaatgaactcaggttgcaaaacaaaaaaaaacaaaacaaaaaaaaac
cctccatgataagaggatgatgaaggtgggcagagggtctacatctgctt
aatgtgctgaaggccagactctgaagaaataactatagaaacgccaccca
acctactgggtcttgctcaagattctcctgtgaacctaaccacagctgtt
gggtatgcaatgtttgctaaatcaaaatagaatatgcagtttagatattt
ttgtgttttgttttaattccttattgtttaaagaagtctatactccttgg
gatttatgggagcagcgttatttatcagcatttagagagcgcgggtggcc
actggcaccaccaagctcatgagatcttagtactcacttcaaaacaagcc
tcagaaataacaatcaaatatgttagtgacatacaactcattcaaagaaa
atccacaaggctgttgtgtggtctctgcagctacatcaaaggggctcttc
tgaacagccaaccatctattgctttagataatcttcttctccagatagtt
ttctggaccaaaaaataaaaagggaaaaggtggttattggggaatgcctg
tggctcctggtaaaagtaataggctgctttacagttccgaacccgatgca
ggctta
gaattccatcatgggcccttcctaagcatgtgaaatgagagctgaggccg
gagattcgtgtacccttagccactcatttatgcttacacagtgaacgtct
gcctgttagctctagaatgtgaaatgtctttaaaaatgtttatttcatac
ttcattttaatcttattatcttttgagacaggccccgtggccctaattga
agtcattctatagctgagggtgaccttggactttgaatcttcctgtctcc
acttccaaagcactaggattacatttgcagtgctagggacagaacccagg
atgccagcacaccagacaagcaccgatctgcctctttagcacatcacatc
atcttcattgtccagtacatttccacctttacctggctgctgatggtcaa
gcaatatgcactctttaatgtcattatcaagtggaaaacttttgggatgg
tcagagtaattagaaggtttgaggatgggaggaccaaatgaaaacatggg
gatgggcaattaacccattgctttagacagaaagcactcaggccctttag
ggaaatctggaagcatccgtctggacccttggaggaggaggatgctcagg
atggaactggattttttgggatacctttctacagattggtgagctctgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgactccactatcaacaactaacc
tacggagcaaaaaataaataaatttaaaattttatatctgtctagtgtgt
gtgtgtttggtgtgtgggtggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23071547_23072708
seq2: B6Ng01-159K20.b_47_1202 (reverse)

seq1  TAAGCCTGCATGCTGGTGCTGGAAACTGTAAGAGCAGCATA-TACTTTTA  49
      ||||||||||| | |||  | | |||||||| |||||| || ||||||| 
seq2  TAAGCCTGCAT-CGGGT--TCGGAACTGTAA-AGCAGCCTATTACTTTT-  45

seq1  ACCACTGAGCCACAAGCAATCCCCAAATACAACCTTTTCCTTTCTTATTT  99
      ||||  |||||||| ||| |||||||  || ||||||||| || ||||||
seq2  ACCA-GGAGCCACAGGCATTCCCCAATAACCACCTTTTCCCTTTTTATTT  94

seq1  TTT-GTTCAGAAAACTATCTGG-GGAGAAGATTATCTAAAAGCAATAGAT  147
      ||| || ||||||||||||||| | |||||||||||| ||||||||||||
seq2  TTTGGTCCAGAAAACTATCTGGAGAAGAAGATTATCT-AAAGCAATAGAT  143

seq1  GGTTGGCTGTTCAGAAGAGCCCCTTTGATGTAGCTGCAGAGACCACACAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCTGTTCAGAAGAGCCCCTTTGATGTAGCTGCAGAGACCACACAA  193

seq1  CAGCCTTGTGGATTTTTCTTTTGAATGAGTTGTATGTCACTAACATATTT  247
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  CAGCCTTGTGGATTTT--CTTTGAATGAGTTGTATGTCACTAACATATTT  241

seq1  GATTGTTATTTCTGAGGCTTGTTTTGAAGTGAGTACTAAGATCTCATGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTATTTCTGAGGCTTGTTTTGAAGTGAGTACTAAGATCTCATGAG  291

seq1  CTTGGTGGTGCCAGTGGCCACCCGCGCTCTCTAAATGCTGATAAATAACG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGGTGCCAGTGGCCACCCGCGCTCTCTAAATGCTGATAAATAACG  341

seq1  CTGCTCCCATAAATCCCAAGGAGTATAGACTTCTTTAAACAATAAGGAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCATAAATCCCAAGGAGTATAGACTTCTTTAAACAATAAGGAAT  391

seq1  TAAAACAAAACACAAAAATATCTAAACTGCATATTCTATTTTGATTTAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAACACAAAAATATCTAAACTGCATATTCTATTTTGATTTAGC  441

seq1  AAACATTGCATACCCAACAGCTGTGGTTAGGTTCACAGGAGAATCTTGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGCATACCCAACAGCTGTGGTTAGGTTCACAGGAGAATCTTGAG  491

seq1  CAAGACCCAGTAGGTTGGGTGGCGTTTCTATAGTTATTTCTTCAGAGTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCCAGTAGGTTGGGTGGCGTTTCTATAGTTATTTCTTCAGAGTCT  541

seq1  GGCCTTCAGCACATTAAGCAGATGTAGACCCTCTGCCCACCTTCATCATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCAGCACATTAAGCAGATGTAGACCCTCTGCCCACCTTCATCATC  591

seq1  CTCTTATCATGGAGGGTTTTTTTTTGTTTTGTTTTTTTTTGTTTTGCAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCATGGAGGGTTTTTTTTTGTTTTGTTTTTTTTTGTTTTGCAAC  641

seq1  CTGAGTTCATTCTATTTATCTACCTGTCCTTGTATAACAAAATTTATCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCATTCTATTTATCTACCTGTCCTTGTATAACAAAATTTATCTG  691

seq1  ACCCTCCATCCCCTGAGCTCCAGCCCATTTGAAATATTTTTAATTGACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCATCCCCTGAGCTCCAGCCCATTTGAAATATTTTTAATTGACAT  741

seq1  AGGACTCTGAAATACAACCAGAGGAAGTATATCAAACAGACAGAAAGATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTGAAATACAACCAGAGGAAGTATATCAAACAGACAGAAAGATA  791

seq1  TGAAGAATTATCTTTTATTTCTGCCGCATACATATTTTTATTTGTACACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTATCTTTTATTTCTGCCGCATACATATTTTTATTTGTACACA  841

seq1  TCTGTCTTTTCTCAGAATCATAATGCCTTCTGTTGAAATGGGAGCTAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTTCTCAGAATCATAATGCCTTCTGTTGAAATGGGAGCTAACA  891

seq1  CCCCAGTTTGTGTCTTGTCTTTTTGTTGTAACACAAGATTGTATATACTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTTTGTGTCTTGTCTTTTTGTTGTAACACAAGATTGTATATACTG  941

seq1  ACTTCTTGTTCCCCGTCTGTATTTGTCTGAGGCAGGGTCTCACTCTATAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGTTCCCCGTCTGTATTTGTCTGAGGCAGGGTCTCACTCTATAG  991

seq1  ATTGTGTTGGCCTGGAATTTACTATGTATCTCAAGGTGGCCTTGAATTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTGGCCTGGAATTTACTATGTATCTCAAGGTGGCCTTGAATTCT  1041

seq1  TGGACACTATTTCTGCTTTGGCCTCTTGGATTCTGGGATTATAGGCATGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACTATTTCTGCTTTGGCCTCTTGGATTCTGGGATTATAGGCATGA  1091

seq1  GCTACCAGGTCAAGCTGTAATTTCAAACATTTTTGAAAACTGAGTTCTAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCAGGTCAAGCTGTAATTTCAAACATTTTTGAAAACTGAGTTCTAT  1141

seq1  TCCATCAAAGAATTC  1162
      |||||||||||||||
seq2  TCCATCAAAGAATTC  1156

seq1: chr14_22891263_22892038
seq2: B6Ng01-159K20.g_67_840

seq1  GAATTCCATCATGGGCCCTTCCTAAGCATGTGAAATGAGAGCTGAGGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCATGGGCCCTTCCTAAGCATGTGAAATGAGAGCTGAGGCCG  50

seq1  GAGATTCGTGTACCCTTAGCCACTCATTTATGCTTACACAGTGAACGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCGTGTACCCTTAGCCACTCATTTATGCTTACACAGTGAACGTCT  100

seq1  GCCTGTTAGCTCTAGAATGTGAAATGTCTTTAAAAATGTTTATTTCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTAGCTCTAGAATGTGAAATGTCTTTAAAAATGTTTATTTCATAC  150

seq1  TTCATTTTAATCTTATTATCTTTTGAGACAGGCCCCGTGGCCCTAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTAATCTTATTATCTTTTGAGACAGGCCCCGTGGCCCTAATTGA  200

seq1  AGTCATTCTATAGCTGAGGGTGACCTTGGACTTTGAATCTTCCTGTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCTATAGCTGAGGGTGACCTTGGACTTTGAATCTTCCTGTCTCC  250

seq1  ACTTCCAAAGCACTAGGATTACATTTGCAGTGCTAGGGACAGAACCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAAAGCACTAGGATTACATTTGCAGTGCTAGGGACAGAACCCAGG  300

seq1  ATGCCAGCACACCAGACAAGCACCGATCTGCCTCTTTAGCACATCACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGCACACCAGACAAGCACCGATCTGCCTCTTTAGCACATCACATC  350

seq1  ATCTTCATTGTCCAGTACATTTCCACCTTTACCTGGCTGCTGATGGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATTGTCCAGTACATTTCCACCTTTACCTGGCTGCTGATGGTCAA  400

seq1  GCAATATGCACTCTTTAATGTCATTATCAAGTGGAAAACTTTTGGGATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATGCACTCTTTAATGTCATTATCAAGTGGAAAACTTTTGGGATGG  450

seq1  TCAGAGTAATTAGAAGGTTTGAGGATGGGAGGACCAAATGAAAACATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTAATTAGAAGGTTTGAGGATGGGAGGACCAAATGAAAACATGGG  500

seq1  GATGGGCAATTAACCCATTGCTTTAGACAGAAAGCACTCAGGCCCTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCAATTAACCCATTGCTTTAGACAGAAAGCACTCAGGCCCTTTAG  550

seq1  GGAAATCTGGAAGCATCCGTCTGGACCCTTGGAGGAGGAGGATGCTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTGGAAGCATCCGTCTGGACCCTTGGAGGAGGAGGATGCTCAGG  600

seq1  ATGGAACTGGATTTTTTGGGATACCTTTCTACAGATTGGTGAGCTCTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTGGATTTTTTGGGATACCTTTCTACAGATTGGTGAGCTCTGTG  650

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGACTCCACTATCAACAACTAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGACTCCACTATCAACAACTAACC  700

seq1  TACGAAGCAAAAAATAAATTAATTTAAAATTTTTATATCTGTCTAGTGTG  750
      |||| |||||||||||||| ||||||||| ||||||||||||||||||||
seq2  TACGGAGCAAAAAATAAATAAATTTAAAA-TTTTATATCTGTCTAGTGTG  749

seq1  TGTGTGTTTGTGTGTGTGGGTGCATG  776
      |||||||||| ||||||||||| |||
seq2  TGTGTGTTTG-GTGTGTGGGTGGATG  774