BAC Information

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BAC

Clone NameB6Ng01-159L04
Chromosome14 (Build37)
Map Location 98,172,932 - 98,174,032
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668654, EG668659
Downstream geneDach1, LOC635593, LOC619716
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159L04.bB6Ng01-159L04.g
ACCDH953285DH953286
length4271,091
definitionDH953285|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L04, 5' end.DH953286|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcttggcacccaacaagcagctgaaagaatcagatgcagatatttccacc
caaccaatggacagaagctgctgaccctttttggttgaattaggaaaagg
ctgaaagaagctgagaaggagggtaatcctgcaggaggaccagcagtctc
cactaacctggacccctaagatctctcaaacactggaccaccaaccagga
agcatacacagctgatatgaggccctcagcacatgtatagcagaggactg
ctggttctgggttcaaacagatgcacctaaccctcaagagagtggagtcc
ccagggaggttagaggtcaggtggggtggggggtaggggattggaacctc
ttccccgagactggggattgtgtttgaggcatggaatggggaacagtctt
agggggggaggccaacaacatgactca

tgtgaaggagccctggggaaagttgcaagacaaattaatactgcatatgg
aaaagagtttgaaaagctttgtccaaatagatatttggatgagcttagta
aagagattttgcacatttagacaagttaaaaatatgaacattatcctaac
tgtttagcacctttctgttctcactcaagtttatgccgggacagcctgtg
gtttggaggtttttctgagagttgaaagttaatgtataactagttttagc
agctactgaagtgtgactatgtgtgagcattgtgctttctggttacatag
ttacaaggggtttttcaggaaacataattggcttgaggaaaataatgaaa
agtcttttgattacatattattgtataaaaaggaagtgtgtaatgaatac
aagactgaggtgaactcaggggagtggggggactggccagtgatgagcct
ggggctggggagtgggggaactctggctaccttggggagtgggggatctc
tggctatctctgagcacagcttgaggacagcaatgaggcacatgcatttt
ttcctcagaggctctgatttctcactaatccaatcctcccactctcaaga
accccaaaatgaccgaggctgctccttgcagtgttttcctccagttttgt
gaatactatttagaaaagttttgttttgccattggcacaccaactcactg
gtgctttgggtgaagaatcagggaaatcttggaaaaatgtttcaatccct
ttgcagttcagtagagctctgcccagtctcaaggatgggtaaggaaaaaa
cccaaggaactcatctcattaattttttattgctatgataaagcatcatt
atcatgacaacttacagaagaatgggtttttgggaccttgctatttcaga
gaataggggtctatcataaccatggcaacaggaagcagcatgacactgag
agtatttgagaattcacataccagtttatgaacaggaagcaaaacttcag
tgggggatgccagaggctttttgatgcttcaagtcccccaccaagagaaa
atctttttggctctggctttcaccgggcatctgatacaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98172932_98174032
seq2: B6Ng01-159L04.g_77_1167 (reverse)

seq1  GCCTG-ATCAGCTGCCCGGTTGAAAG-CAGAGCCACAAAGATTTTTCCCT  48
      ||||| ||||| ||||||| |||||| |||||||| ||||| ||||| ||
seq2  GCCTGTATCAGATGCCCGG-TGAAAGCCAGAGCCAAAAAGA-TTTTCTCT  48

seq1  TTGTGGGGGGACTTTGAGGCATC-AAAAGCCTCTTGCCATCCCCACTGAA  97
      | || ||||||| |||| ||||| |||||||||| ||   ||||||||||
seq2  TGGT-GGGGGAC-TTGAAGCATCAAAAAGCCTCTGGCATCCCCCACTGAA  96

seq1  GTTTTTGCTTCCTGTTCATAAACTGTTATGTGAATTCTCAAATTACTCTC  147
      | ||||||||||||||||||||||| |||||||||||||||| |||||| 
seq2  G-TTTTGCTTCCTGTTCATAAACTGGTATGTGAATTCTCAAA-TACTCT-  143

seq1  CAGTGTCATGCCTGCCTTCCTGTTGCCATGGTTATGATAGACCCCTATTC  197
      |||||||||| ||| |||||||||||||||||||||||||||||||||||
seq2  CAGTGTCATG-CTG-CTTCCTGTTGCCATGGTTATGATAGACCCCTATTC  191

seq1  TTCTGAAATAGCAAGGTCCCAAAAAACCCATTCTTCTGTAAGTTGTCATG  247
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  -TCTGAAATAGCAAGGTCCC-AAAAACCCATTCTTCTGTAAGTTGTCATG  239

seq1  ATAATGATGCTTTATCATAGCAATAAAAAAATTAATGAGATGAGTTCCTT  297
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAATGATGCTTTATCATAGCAAT-AAAAAATTAATGAGATGAGTTCCTT  288

seq1  GGGTTTTTTCCTTACCCATCCTTGAGACTGGGCAGAGCTCTACTGAACCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGGTTTTTTCCTTACCCATCCTTGAGACTGGGCAGAGCTCTACTGAA-CT  337

seq1  GCAAAGGGATTGAAACATTTTTCCAAGATTTCCCTGATTCTTCACCCAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGATTGAAACATTTTTCCAAGATTTCCCTGATTCTTCACCCAAA  387

seq1  GCACCAGTGAGTTGGTGTGCCAATGGCAAAACAAAACTTTTCTAAATAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGTGAGTTGGTGTGCCAATGGCAAAACAAAACTTTTCTAAATAGT  437

seq1  ATTCACAAAACTGGAGGAAAACACTGCAAGGAGCAGCCTCGGTCATTTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAAAACTGGAGGAAAACACTGCAAGGAGCAGCCTCGGTCATTTTG  487

seq1  GGGTTCTTGAGAGTGGGAGGATTGGATTAGTGAGAAATCAGAGCCTCTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTTGAGAGTGGGAGGATTGGATTAGTGAGAAATCAGAGCCTCTGA  537

seq1  GGAAAAAATGCATGTGCCTCATTGCTGTCCTCAAGCTGTGCTCAGAGATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAATGCATGTGCCTCATTGCTGTCCTCAAGCTGTGCTCAGAGATA  587

seq1  GCCAGAGATCCCCCACTCCCCAAGGTAGCCAGAGTTCCCCCACTCCCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGATCCCCCACTCCCCAAGGTAGCCAGAGTTCCCCCACTCCCCAG  637

seq1  CCCCAGGCTCATCACTGGCCAGTCCCCCCACTCCCCTGAGTTCACCTCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCTCATCACTGGCCAGTCCCCCCACTCCCCTGAGTTCACCTCAG  687

seq1  TCTTGTATTCATTACACACTTCCTTTTTATACAATAATATGTAATCAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTATTCATTACACACTTCCTTTTTATACAATAATATGTAATCAAAA  737

seq1  GACTTTTCATTATTTTCCTCAAGCCAATTATGTTTCCTGAAAAACCCCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTCATTATTTTCCTCAAGCCAATTATGTTTCCTGAAAAACCCCTT  787

seq1  GTAACTATGTAACCAGAAAGCACAATGCTCACACATAGTCACACTTCAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATGTAACCAGAAAGCACAATGCTCACACATAGTCACACTTCAGT  837

seq1  AGCTGCTAAAACTAGTTATACATTAACTTTCAACTCTCAGAAAAACCTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTAAAACTAGTTATACATTAACTTTCAACTCTCAGAAAAACCTCC  887

seq1  AAACCACAGGCTGTCCCGGCATAAACTTGAGTGAGAACAGAAAGGTGCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAGGCTGTCCCGGCATAAACTTGAGTGAGAACAGAAAGGTGCTA  937

seq1  AACAGTTAGGATAATGTTCATATTTTTAACTTGTCTAAATGTGCAAAATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAGGATAATGTTCATATTTTTAACTTGTCTAAATGTGCAAAATC  987

seq1  TCTTTACTAAGCTCATCCAAATATCTATTTGGACAAAGCTTTTCAAACTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTAAGCTCATCCAAATATCTATTTGGACAAAGCTTTTCAAACTC  1037

seq1  TTTTCCATATGCAGTATTAATTTGTCTTGCAACTTTCCCCAGGGCTCCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATATGCAGTATTAATTTGTCTTGCAACTTTCCCCAGGGCTCCTT  1087

seq1  CACA  1101
      ||||
seq2  CACA  1091


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