BAC Information

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BAC

Clone NameB6Ng01-160I23
Chromosome14 (Build37)
Map Location 99,540,722 - 99,692,334
singlet/doubletdoublet
Overlap geneD14Ertd581e, LOC100043395, LOC100043397
Upstream geneDach1, LOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3
Downstream geneKlf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160I23.bB6Ng01-160I23.g
ACCDH953901DH953902
length1,071736
definitionDH953901|Mus musculus domesticus DNA, BAC clone: B6Ng01-160I23, 5' end.DH953902|Mus musculus domesticus DNA, BAC clone: B6Ng01-160I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,540,722 - 99,541,800)(99,691,603 - 99,692,334)
sequence
gaattcacaaatcttaccttaccaagagaaaggtctgtgcatgacagaga
actctggcaaagataatatgtattatataaataattactatttagttttg
tggttcattcatttctcctaggcatattgtaggcattttgtaggcttttg
tttacataaccttaaaatttatggcatagttctatagtacagcatgattt
tccctaaacaatagccattactatatattattttactatgtacttattgt
gacagtttcgtgatgtttcagttgtccatcaaaaaacaagaacaaagaga
atcatttcaaatacatcctagcatagcatacgtttacatgtattgactct
ctccccgactaggagagatagataggtagataggttggcaaagctgacta
gaaaactgggcagcaggcgaagtcagcagaaggatagtcagagcctgctg
tgctcatccccagggctgctctggatcctcattcacagtgaatggaaact
ttctgtttaggcttcatttctgaagggacacaataccctgacaaaaaaca
gcttaggagagaagggttcattttagctcacaagtccgtcctgctgggaa
gtcaaagcaagccccatctgcaggtgagagcacgagagtaaattatgcac
tgtgagtgctcagcctgcactctcattacagagttctggggcctaagctg
ggaaatggggcctcccacatcaattaatgcagtcaagacagtcccctcac
gcgccaacctgatctagacaacagctcatgtacactcttcccaagtgatt
ctgggctttgttgagtgggcaattaaaactaaccatcataccgcctaacc
agaaaattgatgggatcggacccaggcgcttcaccacagggtttagattg
acctgtaaggtattacactgtgacacagttgccaccagatggcgcaaagt
gcagcgcaatgctgtgcgctcggggacaccttagtagcttttgatgtaca
agctgctttattgtttttcacttcacaggactctgttccggtacttatgt
gactggaatcctcactatggc
gaattcaaatccagctcggtctgcatgagatcctgtcttcaaagcaacaa
aatgaaaacaaatcacactggtttctctgtatagctttggccaacaggct
gaccttgaactcagagatttgcctgtctctgccacacagtgctgggatta
aatacaacgtgtgctactaccacacagctacatttttaaaaaaagattta
cctatctatttatttatttaatgtatatgaatacaccattgctctcttca
gacacaccagaagaggtattcggatgccattacagatggttgtgagccac
cacgtggttgatgggaattgaactcgggaccttgagaagagcagtcggtg
ctcttaactactgagccatctctccagcccacacagctacatttttgaca
attagaaatatctatcatgctgggcatgatggtgcaggcctttaatccca
gcacttggggagcagaagcaggcagatttctaggttcgaggccagcctgg
tctacagagtgagttccaggacagccagggctacacagagaaaccctgtc
tcgaaaaaccaaaaaccaaaaaaagagagagagagagagaaaagatatgt
gtgggtgagcacacgtaatctcagcacttgggagcagaggccccacagtg
aggagttagtttccaggttagttccttcacagctcaaaagatagctcaga
tagcccgcaaactccttatatccttatatgggtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99540722_99541800
seq2: B6Ng01-160I23.b_46_1116

seq1  GAATTCACAAATCTTACCTTACCAAGAGAAAGGTCTGTGCATGACAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAATCTTACCTTACCAAGAGAAAGGTCTGTGCATGACAGAGA  50

seq1  ACTCTGGCAAAGATAATATGTATTATATAAATAATTACTATTTAGTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGCAAAGATAATATGTATTATATAAATAATTACTATTTAGTTTTG  100

seq1  TGGTTCATTCATTTCTCCTAGGCATATTGTAGGCATTTTGTAGGCTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCATTCATTTCTCCTAGGCATATTGTAGGCATTTTGTAGGCTTTTG  150

seq1  TTTACATAACCTTAAAATTTATGGCATAGTTCTATAGTACAGCATGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATAACCTTAAAATTTATGGCATAGTTCTATAGTACAGCATGATTT  200

seq1  TCCCTAAACAATAGCCATTACTATATATTATTTTACTATGTACTTATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAACAATAGCCATTACTATATATTATTTTACTATGTACTTATTGT  250

seq1  GACAGTTTCGTGATGTTTCAGTTGTCCATCAAAAAACAAGAACAAAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTTCGTGATGTTTCAGTTGTCCATCAAAAAACAAGAACAAAGAGA  300

seq1  ATCATTTCAAATACATCCTAGCATAGCATACGTTTACATGTATTGACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCAAATACATCCTAGCATAGCATACGTTTACATGTATTGACTCT  350

seq1  CTCCCCGACTAGGAGAGATAGATAGGTAGATAGGTTGGCAAAGCTGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGACTAGGAGAGATAGATAGGTAGATAGGTTGGCAAAGCTGACTA  400

seq1  GAAAACTGGGCAGCAGGCGAAGTCAGCAGAAGGATAGTCAGAGCCTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGGGCAGCAGGCGAAGTCAGCAGAAGGATAGTCAGAGCCTGCTG  450

seq1  TGCTCATCCCCAGGGCTGCTCTGGATCCTCATTCACAGTGAATGGAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCCCCAGGGCTGCTCTGGATCCTCATTCACAGTGAATGGAAACT  500

seq1  TTCTGTTTAGGCTTCATTTCTGAAGGGACACAATACCCTGACAAAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTAGGCTTCATTTCTGAAGGGACACAATACCCTGACAAAAAACA  550

seq1  GCTTAGGAGAGAAGGGTTCATTTTAGCTCACAAGTCCGTCCTGCTGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGAGAGAAGGGTTCATTTTAGCTCACAAGTCCGTCCTGCTGGGAA  600

seq1  GTCAAAGCAAGCCCCATCTGCAGGTGAGAGCACGAGAGTAAATTATGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGCAAGCCCCATCTGCAGGTGAGAGCACGAGAGTAAATTATGCAC  650

seq1  TGTGAGTGCTCAGCCTGCACTCTCATTACAGAGTTCTGGGGCCTAAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGCTCAGCCTGCACTCTCATTACAGAGTTCTGGGGCCTAAGCTG  700

seq1  GGAAATGGGGCCTCCCACATCAATTAATGCAGTCAAGACAGTCCCCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGGGCCTCCCACATCAATTAATGCAGTCAAGACAGTCCCCTCAC  750

seq1  GCGCCAACCTGATCTAGACAACAGCTCATGTACACTCTTCCCAAGTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCAACCTGATCTAGACAACAGCTCATGTACACTCTTCCCAAGTGATT  800

seq1  CTGGGCTTTGTTGAGTGGGCAATTAAAACTAACCATCATACCGCCTAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTTTGTTGAGTGGGCAATTAAAACTAACCATCATACCGCCTAACC  850

seq1  AGAAAATTGATGGGATCGGACCCAGGCGCTTCAACCACAGGGTTTTAGAT  900
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  AGAAAATTGATGGGATCGGACCCAGGCGCTTC-ACCACAGGG-TTTAGAT  898

seq1  TGACCTGTAAGGTATTAACACTGTGACACAGTTGCCACCAGATGGCGCCA  950
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  TGACCTGTAAGGTATT-ACACTGTGACACAGTTGCCACCAGATGGCG-CA  946

seq1  AAGTGCAGCGCAATGCTGTGCCGGCTCGGGGACACCTTAGTAGCTTTTGA  1000
      |||||||||||||||||||||  |||||||||||||||||||||||||| 
seq2  AAGTGCAGCGCAATGCTGTGC--GCTCGGGGACACCTTAGTAGCTTTTG-  993

seq1  ATGTACAAGCTTGCTTTTATTGTTTTTCACTTCACAGGACTCTGTCCCGG  1050
      |||||||||| ||| |||||||||||||||||||||||||||||| ||||
seq2  ATGTACAAGC-TGC-TTTATTGTTTTTCACTTCACAGGACTCTGTTCCGG  1041

seq1  TACTTATGTGACT-GAATCCTCACTATGGC  1079
      ||||||||||||| ||||||||||||||||
seq2  TACTTATGTGACTGGAATCCTCACTATGGC  1071

seq1: chr14_99691603_99692334
seq2: B6Ng01-160I23.g_69_804 (reverse)

seq1  CTGA-CCATATAAGGATATAAGGAG-TTGCGGGCTATCTGAGCTATC-TT  47
      |||| |||||||||||||||||||| ||||||||||||||||||||| ||
seq2  CTGACCCATATAAGGATATAAGGAGTTTGCGGGCTATCTGAGCTATCTTT  50

seq1  TGAGCTGTGAAGGAACTAACCTGG-AACTAACTCCTCACCTGT-GGGCCT  95
      |||||||||||||||||||||||| ||||||||||||| |||| ||||||
seq2  TGAGCTGTGAAGGAACTAACCTGGAAACTAACTCCTCA-CTGTGGGGCCT  99

seq1  CTGCTCCCAAGTGCTGAGATTACGTGTGCTCACCCACACATTTCTTTTCT  145
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGCTCCCAAGTGCTGAGATTACGTGTGCTCACCCACACATATCTTTTCT  149

seq1  CTCTCTCTCTCTCTTTTTTTGGTTTTTGGTTTTTCGAGACAGGGTTTCTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTTTTTTTGGTTTTTGGTTTTTCGAGACAGGGTTTCTC  199

seq1  TGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTC  249

seq1  GAACCTAGAAATCTGCCTGCTTCTGCTCCCCAAGTGCTGGGATTAAAGGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAGAAATCTGCCTGCTTCTGCTCCCCAAGTGCTGGGATTAAAGGC  299

seq1  CTGCACCATCATGCCCAGCATGATAGATATTTCTAATTGTCAAAAATGTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCATCATGCCCAGCATGATAGATATTTCTAATTGTCAAAAATGTA  349

seq1  GCTGTGTGGGCTGGAGAGATGGCTCAGTAGTTAAGAGCACCGACTGCTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGGGCTGGAGAGATGGCTCAGTAGTTAAGAGCACCGACTGCTCT  399

seq1  TCTCAAGGTCCCGAGTTCAATTCCCATCAACCACGTGGTGGCTCACAACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGTCCCGAGTTCAATTCCCATCAACCACGTGGTGGCTCACAACC  449

seq1  ATCTGTAATGGCATCCGAATACCTCTTCTGGTGTGTCTGAAGAGAGCAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATGGCATCCGAATACCTCTTCTGGTGTGTCTGAAGAGAGCAAT  499

seq1  GGTGTATTCATATACATTAAATAAATAAATAGATAGGTAAATCTTTTTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATTCATATACATTAAATAAATAAATAGATAGGTAAATCTTTTTTT  549

seq1  AAAAATGTAGCTGTGTGGTAGTAGCACACGTTGTATTTAATCCCAGCACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTAGCTGTGTGGTAGTAGCACACGTTGTATTTAATCCCAGCACT  599

seq1  GTGTGGCAGAGACAGGCAAATCTCTGAGTTCAAGGTCAGCCTGTTGGCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCAGAGACAGGCAAATCTCTGAGTTCAAGGTCAGCCTGTTGGCCA  649

seq1  AAGCTATACAGAGAAACCAGTGTGATTTGTTTTCATTTTGTTGCTTTGAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATACAGAGAAACCAGTGTGATTTGTTTTCATTTTGTTGCTTTGAA  699

seq1  GACAGGATCTCATGCAGACCGAGCTGGATTTGAATTC  732
      |||||||||||||||||||||||||||||||||||||
seq2  GACAGGATCTCATGCAGACCGAGCTGGATTTGAATTC  736