BAC Information

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BAC

Clone NameB6Ng01-163P06
Chromosome14 (Build37)
Map Location 98,101,766 - 98,236,418
singlet/doubletdoublet
Overlap geneDach1
Upstream geneLOC668654, EG668659
Downstream geneLOC635593, LOC619716
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163P06.bB6Ng01-163P06.g
ACCDH956407DH956408
length1,2161,235
definitionDH956407|Mus musculus domesticus DNA, BAC clone: B6Ng01-163P06, 5' end.DH956408|Mus musculus domesticus DNA, BAC clone: B6Ng01-163P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,235,180 - 98,236,418)(98,101,766 - 98,102,915)
sequence
gaattcaggacatagaagagttgtagagtttgatttatatcacttgagaa
ttttataaactaaaagtgaaaatgaaaatacccaaaaatgaataacagta
attaatgctaagggaggaataaaatttcattccgtttctttttttagaac
ttgtatttttacatggtactttggtatatttagtatgcacatatttcacc
acagctttctgtttgtgtagtccctggacagattacaaggcagtttaata
tgaggaaataaatgttttagagtcaaatacttggatgggacaccttcaaa
tattggctgaaaatagagtacactcaataggattctaatcttaaatcact
aaacattaagtcttagaactgacagtgtaattacttgtgtcttttttacc
cccaaaccagtgtatacagtgaaaatgcaaattcactgtagaatgaacag
aagtgaagctagtgaagcagttcagtgggaagggcacttctgacttacac
ataatagagtttaagtttagattcataagtaaaagttgaaataaaagaga
ggatgaagacagtgcatttagttatagataaagttatttctaaagatact
tatattaaagggtattgacagaaagagggttcatggtggtttgtgtgcag
agagaagtttaaaaaatggcattggttcagtggtagagtgtttggcttac
ctagcatgttcaaggccccatgttcaatcttccagtgtcaccaaaaataa
caccagtaaatcagaaattaaccaatgaagaaaatcctaaaagagatggt
agaaggagaaaaggacagccccaattttatttactctggtttaatcatta
aatataacacaactatggcgtttgggaagcactttgcgtttgagtgtgag
aggaaatacaaggaaatagaactcgcctaagtatcacgactgagaaactc
tcattatccatcttcgaaccagcatcatcatagcacacaactgttttacg
ttgccttttatattctgtgaaaaatgaagagcttgtttacttgccttatt
tattaagttatttaaactatctagaaaataacattatacaagcctggcta
ggtaaagttgcccaatatggtataacatcttatgatatgtaatgtgattt
tcttctttttcctcaacaattcggcagaaactgagtaaatatgctaaggt
taccaggattctgaac
gaattctcacctgaggtaccgaatggctgagaagcacttgaaaaaatgtt
cagcatccttaatcatcaggggaatgcaaatcaagacaaccctgagattc
cacctcacaccagtcagaatggctaagatgaaaaattcaggtgacaacag
atgctggcgaggatgtagagaaagaggaacactcttccattgttggcgcg
attgcaagcttgtacaaccattctggaaatcagtctggcggttcctcaaa
aaattggacatagtactactggaggattccacaatatctctcctgggcat
atatccagaagatattccaaccggtaaaaaggatacgtgctccactatat
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactactcagctgttaaaaagaatgaatttatgaaattcctaggcaaat
ggatggaccaggaggccatcatcctgagtgaggtaacccaatcacaaaag
aactcacatgatatgtactcactgataggtggaaagaattttggatctta
atgttttaaaacatactcattctttattctatgattgtaccacacagtga
aagaaagtcttcaaatcactgaattaacaaagaagcatcctttctttcta
gtctccaatggttgtgtcctcaaatctcaatcacaaacaaatccatatct
tttggccactgttaccttccgaccttgctggagtgctatcagtggcactg
ctaatgctgtgcctacttccagactttagtttcccattcttagctattct
tctgaaaacaactgtttgagtttcaagatggagtttactgaatccccacc
aattgttctcttccctgtactgcctatctatgactttcttcagtggcttc
agacacagggcataaaaaacaaagtctaaatctcagtaacttctcagtat
attgggtggtaaataaattataccaaagttctccctcctgttcagaactt
catactaatagaagctgtcagagactgtgtcagaactccataattcttat
ctccttctcatatattaaggaaagtgtgcatatttaagagtgactgtttg
acgagaagttgtgttccacctctagttgcctttagcttctatgtcgacga
gtccaagggtgtgtagtcacttttgtgctcacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_98235180_98236418
seq2: B6Ng01-163P06.b_45_1260 (reverse)

seq1  GTTCAGAATCCTGGGTATACTTTAGCATTATTTTTACTTCAGTCT-TGCC  49
      |||||||||||| |||| || |||||   || ||||| ||||| | ||||
seq2  GTTCAGAATCCT-GGTA-ACCTTAGC---ATATTTAC-TCAGTTTCTGCC  44

seq1  CAAAATTGTATGAGGAAAAAAGGAAAGAAAATCACATTACATAATCATAA  99
         |||||| ||||||||||    |||||||||||||||||| |||||||
seq2  --GAATTGT-TGAGGAAAAA---GAAGAAAATCACATTACAT-ATCATAA  87

seq1  AGGATGTAATACCAATATT-GGCAACTTTAACCTAGCCAGGCTTTGGTTA  148
        ||||| ||||| ||||| ||||||||| ||||||||||||||    ||
seq2  --GATGTTATACC-ATATTGGGCAACTTT-ACCTAGCCAGGCTT---GTA  130

seq1  TAATGTTATTTTCTAGATAGGTTTAAATAAACTTTATATAAATAAGGCAA  198
      ||||||||||||||||||| |||||||| |||||   |||||||||||||
seq2  TAATGTTATTTTCTAGATA-GTTTAAAT-AACTT--AATAAATAAGGCAA  176

seq1  GTAAACAAGCTCTTCATTTTTTCACAGAATATAAAAGGCAACGTAAAACA  248
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTAAACAAGCTCTTCA-TTTTTCACAGAATATAAAAGGCAACGTAAAACA  225

seq1  GTTGTGTGCTATGATGATGCTGGTTCGAAGATGGATAATGAGAGTTTCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTGCTATGATGATGCTGGTTCGAAGATGGATAATGAGAGTTTCTC  275

seq1  AGTCGTGATACTTAGGCGAGTTCTATTTCCTTGTATTTCCTCTCACACTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTGATACTTAGGCGAGTTCTATTTCCTTGTATTTCCTCTCACACTC  325

seq1  AAACGCAAAGTGCTTCCCAAACGCCATAGTTGTGTTATATTTAATGATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCAAAGTGCTTCCCAAACGCCATAGTTGTGTTATATTTAATGATTA  375

seq1  AACCAGAGTAAATAAAATTGGGGCTGTCCTTTTCTCCTTCTACCATCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAGTAAATAAAATTGGGGCTGTCCTTTTCTCCTTCTACCATCTCT  425

seq1  TTTAGGATTTTCTTCATTGGTTAATTTCTGATTTACTGGTGTTATTTTTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATTTTCTTCATTGGTTAATTTCTGATTTACTGGTGTTATTTTTG  475

seq1  GTGACACTGGAAGATTGAACATGGGGCCTTGAACATGCTAGGTAAGCCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACTGGAAGATTGAACATGGGGCCTTGAACATGCTAGGTAAGCCAA  525

seq1  ACACTCTACCACTGAACCAATGCCATTTTTTAAACTTCTCTCTGCACACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTACCACTGAACCAATGCCATTTTTTAAACTTCTCTCTGCACACA  575

seq1  AACCACCATGAACCCTCTTTCTGTCAATACCCTTTAATATAAGTATCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCATGAACCCTCTTTCTGTCAATACCCTTTAATATAAGTATCTTT  625

seq1  AGAAATAACTTTATCTATAACTAAATGCACTGTCTTCATCCTCTCTTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAACTTTATCTATAACTAAATGCACTGTCTTCATCCTCTCTTTTA  675

seq1  TTTCAACTTTTACTTATGAATCTAAACTTAAACTCTATTATGTGTAAGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTTTTACTTATGAATCTAAACTTAAACTCTATTATGTGTAAGTC  725

seq1  AGAAGTGCCCTTCCCACTGAACTGCTTCACTAGCTTCACTTCTGTTCATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGCCCTTCCCACTGAACTGCTTCACTAGCTTCACTTCTGTTCATT  775

seq1  CTACAGTGAATTTGCATTTTCACTGTATACACTGGTTTGGGGGTAAAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTGAATTTGCATTTTCACTGTATACACTGGTTTGGGGGTAAAAAA  825

seq1  GACACAAGTAATTACACTGTCAGTTCTAAGACTTAATGTTTAGTGATTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGTAATTACACTGTCAGTTCTAAGACTTAATGTTTAGTGATTTA  875

seq1  AGATTAGAATCCTATTGAGTGTACTCTATTTTCAGCCAATATTTGAAGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGAATCCTATTGAGTGTACTCTATTTTCAGCCAATATTTGAAGGT  925

seq1  GTCCCATCCAAGTATTTGACTCTAAAACATTTATTTCCTCATATTAAACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATCCAAGTATTTGACTCTAAAACATTTATTTCCTCATATTAAACT  975

seq1  GCCTTGTAATCTGTCCAGGGACTACACAAACAGAAAGCTGTGGTGAAATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTAATCTGTCCAGGGACTACACAAACAGAAAGCTGTGGTGAAATA  1025

seq1  TGTGCATACTAAATATACCAAAGTACCATGTAAAAATACAAGTTCTAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATACTAAATATACCAAAGTACCATGTAAAAATACAAGTTCTAAAA  1075

seq1  AAAGAAACGGAATGAAATTTTATTCCTCCCTTAGCATTAATTACTGTTAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACGGAATGAAATTTTATTCCTCCCTTAGCATTAATTACTGTTAT  1125

seq1  TCATTTTTGGGTATTTTCATTTTCACTTTTAGTTTATAAAATTCTCAAGT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTGGGTATTTTCATTTTCACTTTTAGTTTATAAAATTCTCAAGT  1175

seq1  GATATAAATCAAACTCTACAACTCTTCTATGTCCTGAATTC  1239
      |||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAATCAAACTCTACAACTCTTCTATGTCCTGAATTC  1216

seq1: chr14_98101766_98102915
seq2: B6Ng01-163P06.g_170_1303

seq1  ACCTCACACCAGTCAGAATGGCTAAGATGAAAAATTCAGGTGACAACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACACCAGTCAGAATGGCTAAGATGAAAAATTCAGGTGACAACAGA  50

seq1  TGCTGGCGAGGATGTAGAGAAAGAGGAACACTCTTCCATTGTTGGCGCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCGAGGATGTAGAGAAAGAGGAACACTCTTCCATTGTTGGCGCGA  100

seq1  TTGCAAGCTTGTACAACCATTCTGGAAATCAGTCTGGCGGTTCCTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGCTTGTACAACCATTCTGGAAATCAGTCTGGCGGTTCCTCAAAA  150

seq1  AATTGGACATAGTACTACTGGAGGATTCCACAATATCTCTCCTGGGCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACATAGTACTACTGGAGGATTCCACAATATCTCTCCTGGGCATA  200

seq1  TATCCAGAAGATATTCCAACCGGTAAAAAGGATACGTGCTCCACTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGAAGATATTCCAACCGGTAAAAAGGATACGTGCTCCACTATATT  250

seq1  CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCC  300

seq1  CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAG  350

seq1  TACTACTCAGCTGTTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTCAGCTGTTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATG  400

seq1  GATGGACCAGGAGGCCATCATCCTGAGTGAGGTAACCCAATCACAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACCAGGAGGCCATCATCCTGAGTGAGGTAACCCAATCACAAAAGA  450

seq1  ACTCACATGATATGTACTCACTGATAGGTGGAAAGAATTTTGGATCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATGATATGTACTCACTGATAGGTGGAAAGAATTTTGGATCTTAA  500

seq1  TGTTTTAAAACATACTCATTCTTTATTCTATGATTGTACCACACAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAAACATACTCATTCTTTATTCTATGATTGTACCACACAGTGAA  550

seq1  AGAAAGTCTTCAAATCACTGAATTAACAAAGAAGCATCCTTTCTTTCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCTTCAAATCACTGAATTAACAAAGAAGCATCCTTTCTTTCTAG  600

seq1  TCTCCAATGGTTGTGTCCTCAAATCTCAATCACAAACAAATCCATATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAATGGTTGTGTCCTCAAATCTCAATCACAAACAAATCCATATCTT  650

seq1  TTGGCCACTGTTACCTTCCGACCTTGCTGGAGTGCTATCAGTGGCACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCACTGTTACCTTCCGACCTTGCTGGAGTGCTATCAGTGGCACTGC  700

seq1  TAATGCTGTGCCTACTTCCAGACTTTAGTTTCCCATTCTTAGCTATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGTGCCTACTTCCAGACTTTAGTTTCCCATTCTTAGCTATTCTT  750

seq1  CTGAAAACAACTGTTTGAGTTTCAAGATGGAGTTTACTGAATCCCCACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACAACTGTTTGAGTTTCAAGATGGAGTTTACTGAATCCCCACCA  800

seq1  ATTGTTCTCTTCCCTGTACTGCCTATCTATGACTTTCTTCAGTGGCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTCTTCCCTGTACTGCCTATCTATGACTTTCTTCAGTGGCTTCA  850

seq1  GACACAGGGCATAAAAAACAAAGTCTAAAATCTCAGGTAACTTCTCAGTA  900
      |||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  GACACAGGGCATAAAAAACAAAGTCT-AAATCTCA-GTAACTTCTCAGTA  898

seq1  TTATTGGGTGGGTAAAATAAATTATACCCAAAAGTTCTTCCCTCCTTGTC  950
       ||||||||||   ||||||||||||||  ||||||| ||||||||  ||
seq2  -TATTGGGTGG--TAAATAAATTATACC--AAAGTTC-TCCCTCCTGTTC  942

seq1  AGAACTTCATACTAATAGAAAGCTTGTCAGAGACTGTGTCCAAGACTCCA  1000
      |||||||||||||||||| |||| ||||||||||||||| ||  ||||||
seq2  AGAACTTCATACTAATAG-AAGC-TGTCAGAGACTGTGT-CAGAACTCCA  989

seq1  TATTTCTTTATCTCTTTCTCATATATAAGAAAAAGTG-GCACTATTAGGA  1049
      || ||| ||||||| ||||||||||| |   |||||| |||   ||| ||
seq2  TAATTC-TTATCTCCTTCTCATATATTAAGGAAAGTGTGCATATTTAAGA  1038

seq1  GTGGACTGGTTG--GAGGAAGTGTGT--CA-CTCTAGGTGTGGGCTTTAA  1094
      || ||||| |||  ||| |  |||||  || |||||   || | ||||| 
seq2  GT-GACTGTTTGACGAGAAGTTGTGTTCCACCTCTA---GTTGCCTTTA-  1083

seq1  GGTCTTCTATGCTCAGACGAAGCCCAATGTGACATGTAGTCACTTTT-TG  1143
         |||||||| || |||||  || |  |||   ||||||||||||| ||
seq2  --GCTTCTATG-TC-GACGAGTCCAAGGGTG---TGTAGTCACTTTTGTG  1126

seq1  CT-ACCTT  1150
      || |||||
seq2  CTCACCTT  1134