BAC Information

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BAC

Clone NameB6Ng01-165L07
Chromosome14 (Build37)
Map Location 97,911,011 - 98,051,238
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165L07.bB6Ng01-165L07.g
ACCDH957691DH957692
length1,1051,130
definitionDH957691|Mus musculus domesticus DNA, BAC clone: B6Ng01-165L07, 5' end.DH957692|Mus musculus domesticus DNA, BAC clone: B6Ng01-165L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,911,011 - 97,912,134)(98,050,104 - 98,051,238)
sequence
gaattcaccttgactcataactaatttactaggaagctagttatttgctc
tttgaaacaaaataagtaaaagagaaaatatcacaaacaaagcttgtaaa
atattcttacctgtcttttagaagcaagtaaaattatactccaattcttt
aatatttgaaccattatcttcaaaccacatattttttctgaaaataaaat
gaagtgagttaattaaacattcagtggtttctcaatattttaacactttt
cctgataatgctttaatagtacctgaatgataaaaatgaatgtttcttaa
acataatttttatttgggagtatcattctttttcatataatcacaaattt
gagaaaatgtcctacaagtattttaaagttttgtcttccattttgtatat
attttagctaagtcattcagtactatttatctgtatagttttttaaaaag
cattaaatttagcatgttaattttctaatacaaaggatatatttttaagc
ctatatatcatttataaaattgggatatacaatttggtaaaattctttta
taacctgcattccacataaaaatgtgatcttactgattgttttactatca
ttcttttctccagatgtgtttctaacacagcatctggcagtgcacttcat
tgtcaagttttgtactttccttaaatctggacatggcttcatggtaacca
taaagtttcatgattttgaaacttttgaagatttcagccagtcatttcat
gcaatggattgtgcagaggtttgttatttttttgtaattagaataattta
tgaattattttagtaattaggataaattataacgtatataggcagaaaag
tcacatgtacatggtaaaatgtatcacacctgatgttgagtttctgatat
tactgatgccatattaaccctttagttcaagggtttcattttttttccta
gagtaactatattttccttgggtgaatcctatgattctttggagattcat
taatttccactttataaaagagaaattttcatggatatttaagcactact
ttaattaatatcatagtataggactttatttcaaaaatataatttaaatt
tcaag
gaattctcttatatcaagagtggaggaatatctatgtaaagtggcaaagc
catataccaaacaccatgtatatgggcatcttgtctatcttttctgtttt
ccaaatttgtttgttgaaccataaatatttaaaagtcacttgaagtcatc
atctcatcccttgctatttgcatcctgaattagatatgcatttctttctt
taataagctaaactattattaaaaaattaaacatctttgtattttagtat
acaaaacatatattattagatcgtatgtctcttgcttttcttacattaca
aaattttacagatttatatcaacttttaaaaatattatttattacactgt
ctgatgtctattttcatagatcacaatttatcagttcacttttctattaa
tttatttatgcatactaggatattttcctaaaagatcgttcatttgtttg
cacaggcccttttgttcatgtgttaatattctttggcatatatgactaag
aatggaattgtcaaatttatgtgtttcaataccacatatttctaaatggt
tttgtgataagtcttacatatagtacttgtaaaactaaattttctacaca
ttctcaacaattcctgatgtttttcctttagcctttatgtatactttaaa
tgttctgtttatctgtaagtgatatttgtacgtgatgtattagtatttga
tgtggtttatactacaaataaagtttcaatcactgcttgattttccttgg
gaaaccatgaacaaatatgttgtaagctcacttaggccattaacaacaga
tcaaagaaattattctacctaagtctaatatggtcaaacaataagttcac
tgaccttactttcaggaccacaggtgacaccaaggtagccactttgccca
aaagcctaccctaatgcagtatctggatcagcagactccttgtaccactt
gtctgtagctttatagaatttatccctgcccaatcaatgctactgccata
gttaaataacctttagaagggtacctgagtatttctgatttctaagtctc
ttcagttgccttaagattgatacttcgggagattcttagctctatgagtc
ttgtcccagtgaccacttttcctttataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97911011_97912134
seq2: B6Ng01-165L07.b_47_1151

seq1  GAATTCACCTTGACTCATAACTAATTTACTAGGAAGCTAGTTATTTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTGACTCATAACTAATTTACTAGGAAGCTAGTTATTTGCTC  50

seq1  TTTGAAACAAAATAAGTAAAAGAGAAAATATCACAAACAAAGCTTGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACAAAATAAGTAAAAGAGAAAATATCACAAACAAAGCTTGTAAA  100

seq1  ATATTCTTACCTGTCTTTTAGAAGCAAGTAAAATTATACTCCAATTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTACCTGTCTTTTAGAAGCAAGTAAAATTATACTCCAATTCTTT  150

seq1  AATATTTGAACCATTATCTTCAAACCACATATTTTTTCTGAAAATAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGAACCATTATCTTCAAACCACATATTTTTTCTGAAAATAAAAT  200

seq1  GAAGTGAGTTAATTAAACATTCAGTGGTTTCTCAATATTTTAACACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAGTTAATTAAACATTCAGTGGTTTCTCAATATTTTAACACTTTT  250

seq1  CCTGATAATGCTTTAATAGTACCTGAATGATAAAAATGAATGTTTCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAATGCTTTAATAGTACCTGAATGATAAAAATGAATGTTTCTTAA  300

seq1  ACATAATTTTTATTTGGGAGTATCATTCTTTTTCATATAATCACAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTTTTATTTGGGAGTATCATTCTTTTTCATATAATCACAAATTT  350

seq1  GAGAAAATGTCCTACAAGTATTTTAAAGTTTTGTCTTCCATTTTGTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGTCCTACAAGTATTTTAAAGTTTTGTCTTCCATTTTGTATAT  400

seq1  ATTTTAGCTAAGTCATTCAGTACTATTTATCTGTATAGTTTTTTAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGCTAAGTCATTCAGTACTATTTATCTGTATAGTTTTTTAAAAAG  450

seq1  CATTAAATTTAGCATGTTAATTTTCTAATACAAAGGATATATTTTTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATTTAGCATGTTAATTTTCTAATACAAAGGATATATTTTTAAGC  500

seq1  CTATATATCATTTATAAAATTGGGATATACAATTTGGTAAAATTCTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATCATTTATAAAATTGGGATATACAATTTGGTAAAATTCTTTTA  550

seq1  TAACCTGCATTCCACATAAAAATGTGATCTTACTGATTGTTTTACTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGCATTCCACATAAAAATGTGATCTTACTGATTGTTTTACTATCA  600

seq1  TTCTTTTCTCCAGATGTGTTTCTAACACAGCATCTGGCAGTGCACTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTCCAGATGTGTTTCTAACACAGCATCTGGCAGTGCACTTCAT  650

seq1  TGTCAAGTTTTGTACTTTCCTTAAATCTGGACATGGCTTCATGGTAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTTTTGTACTTTCCTTAAATCTGGACATGGCTTCATGGTAACCA  700

seq1  TAAAGTTTCATGATTTTGAAACTTTTGAAGATTTCAGCCAGTCATTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTCATGATTTTGAAACTTTTGAAGATTTCAGCCAGTCATTTCAT  750

seq1  GCAATGGATTGTGCAGAGGTTTGTTATTTTTTTGTAATTAGAATAATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGATTGTGCAGAGGTTTGTTATTTTTTTGTAATTAGAATAATTTA  800

seq1  TGAATTATTTTAGTAATTAGGATAAATTATAACGTATATAGGCAGAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATTTTAGTAATTAGGATAAATTATAACGTATATAGGCAGAAAAG  850

seq1  TCACATGTACATGGTAAAATGTATCACACCTGATGTTGAGTTTTCTTGAT  900
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  TCACATGTACATGGTAAAATGTATCACACCTGATGTTGAGTTT--CTGAT  898

seq1  ATTACTGATGCCATATTTAACCCTTTAGTTCAAGGGGTTTCCATTTTTTT  950
      ||||||||||||||| ||||||||||||||||| |||||||   ||||||
seq2  ATTACTGATGCCATA-TTAACCCTTTAGTTCAA-GGGTTTC--ATTTTTT  944

seq1  TTCCTAGAGTAACTATATTTTTCCTTTGTGGTGAATCCTATGATTCTTTG  1000
      ||||||||||||||||| ||||||||   |||||||||||||||||||||
seq2  TTCCTAGAGTAACTATA-TTTTCCTT--GGGTGAATCCTATGATTCTTTG  991

seq1  GAGATTCATTAAATATTCCACTTTATAAAAAGAGAAATTTTTCATTTGAT  1050
      ||||||||||||   ||||||||||| |||||||||| |||||| | |||
seq2  GAGATTCATTAA--TTTCCACTTTAT-AAAAGAGAAA-TTTTCA-TGGAT  1036

seq1  ATTTAAAGCACTAACTTTATATTTAATATCATAGTTATAGGAGTTTTATT  1100
      |||| ||||||| ||||  || |||||||||||| |||||||  ||||||
seq2  ATTT-AAGCACT-ACTT--TAATTAATATCATAG-TATAGGA-CTTTATT  1080

seq1  TTCACAATATAATTTAAA-TTCAAG  1124
      |  | ||||||||||||| ||||||
seq2  TCAAAAATATAATTTAAATTTCAAG  1105

seq1: chr14_98050104_98051238
seq2: B6Ng01-165L07.g_68_1197 (reverse)

seq1  ATTA-AAAGAAAAAGTTGTCACCGGGACAAAGACTCATAAGACTAAGAAA  49
      |||| |||| |||||| ||||| ||||| ||||||||||   ||||| ||
seq2  ATTATAAAGGAAAAGTGGTCACTGGGAC-AAGACTCATAGAGCTAAG-AA  48

seq1  TCTCCCGAAGTTACCAATC-TAAGGCCACTGAAGAGACTTAGATATTCAG  98
      |||||||||| || ||||| |||||| |||||||||||||||| | ||||
seq2  TCTCCCGAAG-TATCAATCTTAAGGCAACTGAAGAGACTTAGA-AATCAG  96

seq1  -AATACTCAGGTACCCTCTAAAAGGTTATATAAACTATGGCAGTAGCACT  147
       ||||||||||||||||   ||||||||| | |||||||||||||||| |
seq2  AAATACTCAGGTACCCTTCTAAAGGTTAT-TTAACTATGGCAGTAGCATT  145

seq1  GATTGGGCAGGGATAAATTTCTATAAAGCTACAGACAAGTGGTACAAGGA  197
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATTGGGCAGGGATAAA-TTCTATAAAGCTACAGACAAGTGGTACAAGGA  194

seq1  GTTCTGCTGATCCAGATACCTGCATTAGGGTAGGCTTTTGGGCAAAGTGG  247
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  G-TCTGCTGATCCAGATA-CTGCATTAGGGTAGGCTTTTGGGCAAAGTGG  242

seq1  CTACCTTGGTGTCACCTGTGGTCCTGAAAGTAAGGTCAGTGAACTTATTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTGGTGTCACCTGTGGTCCTGAAAGTAAGGTCAGTGAACTTATTG  292

seq1  TTTGACCATATTAGACTTAGGTAGAATAATTTCTTTGATCTGTTGTTAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCATATTAGACTTAGGTAGAATAATTTCTTTGATCTGTTGTTAAT  342

seq1  GGCCTAAGTGAGCTTACAACATATTTGTTCATGGTTTCCCAAGGAAAATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAGTGAGCTTACAACATATTTGTTCATGGTTTCCCAAGGAAAATC  392

seq1  AAGCAGTGATTGAAACTTTATTTGTAGTATAAACCACATCAAATACTAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGATTGAAACTTTATTTGTAGTATAAACCACATCAAATACTAAT  442

seq1  ACATCACGTACAAATATCACTTACAGATAAACAGAACATTTAAAGTATAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACGTACAAATATCACTTACAGATAAACAGAACATTTAAAGTATAC  492

seq1  ATAAAGGCTAAAGGAAAAACATCAGGAATTGTTGAGAATGTGTAGAAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCTAAAGGAAAAACATCAGGAATTGTTGAGAATGTGTAGAAAAT  542

seq1  TTAGTTTTACAAGTACTATATGTAAGACTTATCACAAAACCATTTAGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTACAAGTACTATATGTAAGACTTATCACAAAACCATTTAGAAA  592

seq1  TATGTGGTATTGAAACACATAAATTTGACAATTCCATTCTTAGTCATATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTATTGAAACACATAAATTTGACAATTCCATTCTTAGTCATATA  642

seq1  TGCCAAAGAATATTAACACATGAACAAAAGGGCCTGTGCAAACAAATGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAGAATATTAACACATGAACAAAAGGGCCTGTGCAAACAAATGAA  692

seq1  CGATCTTTTAGGAAAATATCCTAGTATGCATAAATAAATTAATAGAAAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTTTTAGGAAAATATCCTAGTATGCATAAATAAATTAATAGAAAAG  742

seq1  TGAACTGATAAATTGTGATCTATGAAAATAGACATCAGACAGTGTAATAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGATAAATTGTGATCTATGAAAATAGACATCAGACAGTGTAATAA  792

seq1  ATAATATTTTTAAAAGTTGATATAAATCTGTAAAATTTTGTAATGTAAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTTTAAAAGTTGATATAAATCTGTAAAATTTTGTAATGTAAGA  842

seq1  AAAGCAAGAGACATACGATCTAATAATATATGTTTTGTATACTAAAATAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGAGACATACGATCTAATAATATATGTTTTGTATACTAAAATAC  892

seq1  AAAGATGTTTAATTTTTTAATAATAGTTTAGCTTATTAAAGAAAGAAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTTTAATTTTTTAATAATAGTTTAGCTTATTAAAGAAAGAAATG  942

seq1  CATATCTAATTCAGGATGCAAATAGCAAGGGATGAGATGATGACTTCAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTAATTCAGGATGCAAATAGCAAGGGATGAGATGATGACTTCAAG  992

seq1  TGACTTTTAAATATTTATGGTTCAACAAACAAATTTGGAAAACAGAAAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTAAATATTTATGGTTCAACAAACAAATTTGGAAAACAGAAAAG  1042

seq1  ATAGACAAGATGCCCATATACATGGTGTTTGGTATATGGCTTTGCCACTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAAGATGCCCATATACATGGTGTTTGGTATATGGCTTTGCCACTT  1092

seq1  TACATAGATATTCCTCCACTCTTGATATAAGAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||
seq2  TACATAGATATTCCTCCACTCTTGATATAAGAGAATTC  1130