BAC Information

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BAC

Clone NameB6Ng01-166B14
Chromosome14 (Build37)
Map Location 15,880,730 - 15,881,846
singlet/doubletsinglet
Overlap genenone
Upstream geneAtxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLrrc3b, LOC667205, 1700062C10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166B14.bB6Ng01-166B14.g
ACCDH957967DH957968
length1,1441,121
definitionDH957967|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B14, 5' end.DH957968|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagtaaggaataccgaaaggttgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgtaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaacttcaggtgacagc
agatgctggcgaggatgtgtaggaagaagaacactcctccattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattagattgtagtactaccagaagatccagtaaaacctctcctggg
catatacccagaagatgatccaaatggtaataaggatacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgtccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaacaataaatttatgaaattcttgggca
aattgatgtatctggaggatatcatccttagtgacataacccaatcacaa
aagaagtcacttgttatgcactcactgataagtcgatattagcccagaaa
tttagaataccaagatagaatttgcaaaacacaggaaaatcaagaagaag
gaaggccaaagtgtgaatatgtcattcctctttagaatagggaacaaaac
acccatggaaggagttacagagaaaaagtttggagctaagacgaaagaat
tgaccatccagagactatcccacctggggatccatcccataatcagccac
caaacccagacactattgcatatgccaacaacatttttctgaaaggaccc
tgatatagctgtctcgagtaaagctatgccagtgtctgggaaatacagaa
gtggatgcttacagtcatctatgggatggaacacaggctcccaatcgaga
gctagagaaagtgcccaagagctgtgggtctgcaaccctatagtgacaca
atatgactacaggtaccccagcgctcgtgtctctagctgcatatgtagca
gaagatgcctagtcggccatcatagaagaagcctgtctgcaacttattgc
cccactacaggatgtcagcaagatgggatgggtgggtaggtaat
gaattcttatggaagagttgggggaagggtgtgtactccactggaagacc
aacagtcaactaacctggacccttgggggctctcagagactgaaccatca
cccaaagagcatgcacgggctggtctgaggccctggcacatatgtagcag
atgtgcagctcagtctctatgtgtgtaccccaacaactggagtgggagct
atcccctaaagctgttgcctgtctgtagaatctgtcccagaactgggctg
acttgtctggccttagtgggagaggatgcacctaaccctgcagagacttg
atgttgatgtgccagagtggggggacccccagaggggaccccactctaat
aaagaagaagagggaggaacgggaagggtgtctgtgaagagggaaccaga
agaggcaatgaaccagacgtaaaataaacaaataaattaatggagttaaa
aaaaataaattccaaatgatttttttaaaagtggagctcacatttcagag
tgctcactgctgcaggaaatgttataagcattaccgtatctcatctgata
cctgcagcagagagtgtgagaggcctgtgagactcacctctcagtagtcc
ctgagttgacaggtcaggctataggttatacttagtcgatattctttttt
tctcttttttagcctgtccagttcttttccagaaggccagaggacagatg
agctttgatgctatacctgaaatgaagcctgaaactgaagagtagaggtg
tgacccagagcctgtctagggagcttggctttagagtctcgactaaatgc
atctctcaatctcgagaagattcccagaggtaacagtccagtgagaacat
tccatatttcaactgtgatgtggacatgattagccctcaagcatggggtt
acaagttcatagcagctgtctagcagctgttctcatgtgcctggcagctt
ttccatctgtaaaacaaaggaggttaggcagaaagggaggcctcatgttc
actggtgcttaatgggtgttgaacatggtggggggcacgaccacaggtat
ttctttcttggactctcactcaatctatagggaaaatatttacccaatct
atattggtttattcttattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15880730_15881846
seq2: B6Ng01-166B14.g_68_1188 (reverse)

seq1  TAAATAAGAATAAACAAATATATAAATGGTATAATATTTTCCATAT-GAT  49
      ||||||||||||||| |||||| |   |||| |||||||||| ||| |||
seq2  TAAATAAGAATAAACCAATATAGATTGGGTA-AATATTTTCCCTATAGAT  49

seq1  TGAGT-AGAGTTCAAGAAAGACATACCTGTGGTCGTGCCCCCCACCATG-  97
      ||||| ||||| ||||||||| ||||||||||||||||||||||||||| 
seq2  TGAGTGAGAGTCCAAGAAAGAAATACCTGTGGTCGTGCCCCCCACCATGT  99

seq1  TCAACACACATTAAGCA-CAGTGAACATGA-GCCT-CCTTTCTGCCTAAC  144
      ||||||| ||||||||| |||||||||||| |||| ||||||||||||||
seq2  TCAACACCCATTAAGCACCAGTGAACATGAGGCCTCCCTTTCTGCCTAAC  149

seq1  CTCCTTTGTTTTACAGATGGAAAAGCTGCCAGGCACATGAGAACAGCTGC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGTTTTACAGATGGAAAAGCTGCCAGGCACATGAGAACAGCTGC  199

seq1  TAGACAGCTGCTATTGAACTTGTAACCCCATGCTTGAGGGCTAATCATGT  244
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGACAGCTGCTA-TGAACTTGTAACCCCATGCTTGAGGGCTAATCATGT  248

seq1  CCACATCACAGTTGAAATATGGAATGTTCTCACTGGACTGTTACCTCTTG  294
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCACATCACAGTTGAAATATGGAATGTTCTCACTGGACTGTTACCTCTGG  298

seq1  GAATCTTCTCGAGATTGAGAGATGCATTTAGTCGAGACTCTAAAGCCAAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCTCGAGATTGAGAGATGCATTTAGTCGAGACTCTAAAGCCAAG  348

seq1  CTCCCTAGACAGGCTCTGGGTCACACCTCTACTCTTCAGTTTCAGGCTTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGACAGGCTCTGGGTCACACCTCTACTCTTCAGTTTCAGGCTTC  398

seq1  ATTTCAGGTATAGCATCAAAGCTCATCTGTCCTCTGGCCTTCTGGAAAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGTATAGCATCAAAGCTCATCTGTCCTCTGGCCTTCTGGAAAAG  448

seq1  AACTGGACAGGCTAAAAAAGAGAAAAAAAGAATATCGACTAAGTATAACC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGACAGGCTAAAAAAGAGAAAAAAAGAATATCGACTAAGTATAACC  498

seq1  TATAGCCTGACCTGTCAACTCAGGGACTACTGAGAGGTGAGTCTCACAGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCTGACCTGTCAACTCAGGGACTACTGAGAGGTGAGTCTCACAGG  548

seq1  CCTCTCACACTCTCTGCTGCAGGTATCAGATGAGATACGGTAATGCTTAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACACTCTCTGCTGCAGGTATCAGATGAGATACGGTAATGCTTAT  598

seq1  AACATTTCCTGCAGCAGTGAGCACTCTGAAATGTGAGCTCCACTTTTAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCCTGCAGCAGTGAGCACTCTGAAATGTGAGCTCCACTTTTAAA  648

seq1  AAAATCATTTGGAATTTATTTTTTTTAACTCCATTAATTTATTTGTTTAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTTGGAATTTATTTTTTTTAACTCCATTAATTTATTTGTTTAT  698

seq1  TTTACGTCTGGTTCATTGCCTCTTCTGGTTCCCTCTTCACAGACACCCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACGTCTGGTTCATTGCCTCTTCTGGTTCCCTCTTCACAGACACCCTT  748

seq1  CCCGTTCCTCCCTCTTCTTCTTTATTAGAGTGGGGTCCCCTCTGGGGGTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTCCTCCCTCTTCTTCTTTATTAGAGTGGGGTCCCCTCTGGGGGTC  798

seq1  CCCCCACTCTGGCACATCAACATCAAGTCTCTGCAGGGTTAGGTGCATCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACTCTGGCACATCAACATCAAGTCTCTGCAGGGTTAGGTGCATCC  848

seq1  TCTCCCACTAAGGCCAGACAAGTCAGCCCAGTTCTGGGACAGATTCTACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCACTAAGGCCAGACAAGTCAGCCCAGTTCTGGGACAGATTCTACA  898

seq1  GACAGGCAACAGCTTTAGGGGATAGCTCCCACTCCAGTTGTTGGGGTACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCAACAGCTTTAGGGGATAGCTCCCACTCCAGTTGTTGGGGTACA  948

seq1  CACATAGAGACTGAGCTGCACATCTGCTACATATGTGCCAGGGCCTCAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAGACTGAGCTGCACATCTGCTACATATGTGCCAGGGCCTCAGA  998

seq1  CCAGCCCGTGCATGCTCTTTGGGTGATGGTTCAGTCTCTGAGAGCCCCCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCGTGCATGCTCTTTGGGTGATGGTTCAGTCTCTGAGAGCCCCCA  1048

seq1  AGGGTCCAGGTTAGTTGACTGTTGGTCTTCCAGTGGAGTACACACCCTTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCAGGTTAGTTGACTGTTGGTCTTCCAGTGGAGTACACACCCTTC  1098

seq1  CCCCAACTCTTCCATAAGAATTC  1117
      |||||||||||||||||||||||
seq2  CCCCAACTCTTCCATAAGAATTC  1121