BAC Information

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BAC

Clone NameB6Ng01-166J07
Chromosome14 (Build37)
Map Location 75,366,449 - 75,579,614
singlet/doubletdoublet
Overlap geneLOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1
Upstream geneLOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519
Downstream geneCpb2, Zc3h13, Gm912, Spert, 4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166J07.bB6Ng01-166J07.g
ACCDH958320DH958321
length994360
definitionDH958320|Mus musculus domesticus DNA, BAC clone: B6Ng01-166J07, 5' end.DH958321|Mus musculus domesticus DNA, BAC clone: B6Ng01-166J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,366,449 - 75,367,371)(75,579,255 - 75,579,614)
sequence
gaattcaagaaacagaggatatgccaaaggtctactctaggcttgtcatc
tggaacaatccatttgtctcttctggatctcaccttccttttcagtaaaa
taataatgacaaacttatctttttacagtgatatgaaagttagttgagta
aagataatggacacaattcaccaaatagtaagtggtgacctttatttggt
agtaacaattacacaggaatgtaaatagtatacccaagagataatgtggc
tctacatttgaggaacagaaccttataataatctaggtaatgtgctatga
aggttataaaatttttgtttttgttgttcatggggactatagagactgct
actcttgcaaaggatcttggtttagtttccagtactaacaatgcctggca
gtccagcactcacatcctaactaagacaacttagtaccaggagtggggta
ttgctatgatagacctggccatgatgtttgggggaggattgtgaaaggac
tttggaatttgagttagaaaagccactgagtgttgagagctcagtgggct
gttctgtaggagcctggaagataagaatgttgaggacaaggcagataatg
gaggtctggttgtgaagtttcagggggaagtttaaagactctattggagc
tacttgttatttcagttaagattctgtagttctggtcagatgaggttgaa
gaattggtagtgattaacaagttgtcagaactactaaaataaaatatttg
ctttgctgggatactccaggctggtcagatggagctgagaaattagtggt
tattttaaggagactaatatccttgaggtgaagtcttctggacagtgttc
cctgagaacacacagaagctgtcttccagatacagccaaggttttacctc
atgctggtagccagcttggtagtgtaatagtcattcagatagtactgagt
ttgaaagcatgaagggtcatggagaacagctgaagcttggcact
attaaaaaaaaaaaaaaaagtgacaactattcattccagtcaatatcttc
agcagccctgtgcgccggcggagagagggaactccgctctatatgtgcga
caggacaggggggaaaatattaagaagatgcaacgctgacctgaaggcaa
agccttaggcaaacttcagtcagtggaggaagcaagctgaggacctgcct
ttccaagaggcccttgaaaagtcagacaattcagggggaagatcattgaa
gaaacagcgagaaagagtgaaacagcatggaactttctggtggcttgcgg
tctagcgcggcgcccagaaccagaacgtgggttggtaagacgtgggaggg
ggaggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_75366449_75367371
seq2: B6Ng01-166J07.b_47_968

seq1  GAATTCAAGAAACAGAGGATATGCCAAAGGTCTACTCTAGGCTTGTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAACAGAGGATATGCCAAAGGTCTACTCTAGGCTTGTCATC  50

seq1  TGGAACAATCCATTTGTCTCTTCTGGATCTCACCTTCCTTTTCAGTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAATCCATTTGTCTCTTCTGGATCTCACCTTCCTTTTCAGTAAAA  100

seq1  TAATAATGACAAACTTATCTTTTTACAGTGATATGAAAGTTAGTTGAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGACAAACTTATCTTTTTACAGTGATATGAAAGTTAGTTGAGTA  150

seq1  AAGATAATGGACACAATTCACCAAATAGTAAGTGGTGACCTTTATTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATGGACACAATTCACCAAATAGTAAGTGGTGACCTTTATTTGGT  200

seq1  AGTAACAATTACACAGGAATGTAAATAGTATACCCAAGAGATAATGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAATTACACAGGAATGTAAATAGTATACCCAAGAGATAATGTGGC  250

seq1  TCTACATTTGAGGAACAGAACCTTATAATAATCTAGGTAATGTGCTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTTGAGGAACAGAACCTTATAATAATCTAGGTAATGTGCTATGA  300

seq1  AGGTTATAAAATTTTTGTTTTTGTTGTTCATGGGGACTATAGAGACTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATAAAATTTTTGTTTTTGTTGTTCATGGGGACTATAGAGACTGCT  350

seq1  ACTCTTGCAAAGGATCTTGGTTTAGTTTCCAGTACTAACAATGCCTGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGCAAAGGATCTTGGTTTAGTTTCCAGTACTAACAATGCCTGGCA  400

seq1  GTCCAGCACTCACATCCTAACTAAGACAACTTAGTACCAGGAGTGGGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCACTCACATCCTAACTAAGACAACTTAGTACCAGGAGTGGGGTA  450

seq1  TTGCTATGATAGACCTGGCCATGATGTTTGGGGGAGGATTGTGAAAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGATAGACCTGGCCATGATGTTTGGGGGAGGATTGTGAAAGGAC  500

seq1  TTTGGAATTTGAGTTAGAAAAGCCACTGAGTGTTGAGAGCTCAGTGGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATTTGAGTTAGAAAAGCCACTGAGTGTTGAGAGCTCAGTGGGCT  550

seq1  GTTCTGTAGGAGCCTGGAAGATAAGAATGTTGAGGACAAGGCAGATAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTAGGAGCCTGGAAGATAAGAATGTTGAGGACAAGGCAGATAATG  600

seq1  GAGGTCTGGTTGTGAAGTTTCAGGGGGAAGTTTAAAGACTCTATTGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGGTTGTGAAGTTTCAGGGGGAAGTTTAAAGACTCTATTGGAGC  650

seq1  TACTTGTTATTTCAGTTAAGATTCTGTAGTTCTGGTCAGATGAGGTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTATTTCAGTTAAGATTCTGTAGTTCTGGTCAGATGAGGTTGAA  700

seq1  GAATTGGTAGTGATTAACAAGTTGTCAGAACTACTAAAATAAAATATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGTAGTGATTAACAAGTTGTCAGAACTACTAAAATAAAATATTTG  750

seq1  CTTTGCTGGGATACTCCAGGCTGGTCAGATGGAGCTGAGAAATTAGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTGGGATACTCCAGGCTGGTCAGATGGAGCTGAGAAATTAGTGGT  800

seq1  TATTTTAAGGAGACTAATATCCTTGAGGTGAAGTCTTCTGGACAGTGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAGGAGACTAATATCCTTGAGGTGAAGTCTTCTGGACAGTGTTC  850

seq1  CCTGAGAACACACAGAAGCTGTCTTCCAGATACAGCCAAGGTTTTACCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAACACACAGAAGCTGTCTTCCAGATACAGCCAAGGTTTTACCTC  900

seq1  ATGCTGGTAGCCAAGCTTGGTAG  923
      |||||||||||| ||||||||||
seq2  ATGCTGGTAGCC-AGCTTGGTAG  922

seq1: chr14_75579255_75579614
seq2: B6Ng01-166J07.g_72_431 (reverse)

seq1  TCTCCCCTCCCCCTCCCACGTCTTACCAACCCACGTTCTGGTTCTGGGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTCCCCCTCCCACGTCTTACCAACCCACGTTCTGGTTCTGGGCG  50

seq1  CCGCGCTAGACCGCAAGCCACCAGAAAGTTCCATGCTGTTTCACTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGCTAGACCGCAAGCCACCAGAAAGTTCCATGCTGTTTCACTCTTTC  100

seq1  TCGCTGTTTCTTCAATGATCTTCCCCCTGAATTGTCTGACTTTTCAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGTTTCTTCAATGATCTTCCCCCTGAATTGTCTGACTTTTCAAGGG  150

seq1  CCTCTTGGAAAGGCAGGTCCTCAGCTTGCTTCCTCCACTGACTGAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGGAAAGGCAGGTCCTCAGCTTGCTTCCTCCACTGACTGAAGTTT  200

seq1  GCCTAAGGCTTTGCCTTCAGGTCAGCGTTGCATCTTCTTAATATTTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGGCTTTGCCTTCAGGTCAGCGTTGCATCTTCTTAATATTTTCCC  250

seq1  CCCTGTCCTGTCGCACATATAGAGCGGAGTTCCCTCTCTCCGCCGGCGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCCTGTCGCACATATAGAGCGGAGTTCCCTCTCTCCGCCGGCGCA  300

seq1  CAGGGCTGCTGAAGATATTGACTGGAATGAATAGTTGTCACTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGCTGAAGATATTGACTGGAATGAATAGTTGTCACTTTTTTTTT  350

seq1  TTTTTTTAAT  360
      ||||||||||
seq2  TTTTTTTAAT  360