BAC Information

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BAC

Clone NameB6Ng01-166P19
Chromosome14 (Build37)
Map Location 123,154,217 - 123,155,342
singlet/doubletsinglet
Overlap genePcca
Upstream geneLOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847
Downstream geneBC006662, 4930594M22Rik, Tmtc4, Vgcnl1, Itgbl1, LOC668700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166P19.bB6Ng01-166P19.g
ACCDH958606DH958607
length1,1291,160
definitionDH958606|Mus musculus domesticus DNA, BAC clone: B6Ng01-166P19, 5' end.DH958607|Mus musculus domesticus DNA, BAC clone: B6Ng01-166P19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcttctggcatgtattaggcgagttcttggcctctgagcccga
cagctgacttttagctgctgtatggatggcattggtttatctctctatct
acaccttatgtgggagggtgggttggaatttttttctactttgtggcctt
gtccatctactgttggtctttatgtaaaaatgtgattgccccatctgacc
acatgtgcctgccacgacgagtgatgaggttaggagaagcctcaggggca
aaatattaagagtacttaaatcttttgggacaatgttctaaattctcacc
acaagtttctcttactacttcatagcctgagtaaaggctgttaagtagaa
tatttttgttaaagatgattttgaagttcttatctccttctgctggcttt
catcaactaccagagtctttacatcaaaatcctggtttggtggttcagaa
aaaagttaaatatgctatcatgtcagttcttgaggttttagccacacact
atcaagtgtgtacagcactttaaatgctggcttcccatcttcctccagag
gccttccagaagcgttgttaagtgggcccgggggctagcacgggattccc
agtggtgatgagtgggaatgtcttgccctcgctgattcagtgatgaggta
gttttgaatcttggcatgactctttcagctctttggaattccataaaaac
aacatcatcgtcatggagcctcaatgtgcagcagctgcactgagtgtttt
tgatgtcttcgcagaaggcggacaagggcttctctttgaaatgtgtgagg
cgacttgagatgccgctgcgcacatggagttaattagtccttcctgggac
tggatgtccgctttgttgcagctgaatttctcatttccactcacccatta
ctagaaacaccttgcttcaacgggtttctttcaagaaagaggggtttcgg
gttctatgttttacatgctttttgatgttggtttccctttactgagagga
cctcatgtttatacaactgttattattaggcaaacatagctgccccacca
aggctcctttgtaccaggctgggtaggcttgccaatcgagatgagatgtg
tgaaaatgatcttgcttctcaagaccccc
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
atcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaggatcaaaaattcaggtaacagc
agatgctggtgaggatgtggagaaagaggagcacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctagtggttcctca
gaaaattggacatagtactactagaggatcctgcaataccactcctgggc
atatatccagaagatgttccaaccggtaagagggacacatgctccactat
gttcatagcagtcttatttataatagccagaagctagaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaaggaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgtaaaacacatgaaactcaa
gaagaacaaagaccaaagtgtggacactttgccccttcttagaattggaa
acaaaacacccatggaaggagttacagagacacagtttggagctgagatg
aaaggatggaccatctagagactgccatatccggggatctatcccataat
cagcctctaaacgctgacaccattgcatacactagcaagattttactgca
agggccctgatatagctgtctcttgtgaggctgttcttgggcctagcaaa
cacagaagtggatgctcacagtcactattggatggatcacagggccccaa
agagatctagagaaagtgcccagagctgagggactgcaaccctatagtgg
acacatatgactacagtcctccccgcccccgagctcgtgtctctagctgc
atatgtatcagaagatgctagtcaggcatcagtagaaacagagccattgg
tctgcactttatatgcttaaggttaagggaacgccagccagaaatgggag
agggggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123154217_123155342
seq2: B6Ng01-166P19.b_48_1176

seq1  GAATTCAGCTTCTGGCATGTATTAGGCGAGTTCTTGGCCTCTGAGCCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTCTGGCATGTATTAGGCGAGTTCTTGGCCTCTGAGCCCGA  50

seq1  CAGCTGACTTTTAGCTGCTGTATGGATGGCATTGGTTTATCTCTCTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGACTTTTAGCTGCTGTATGGATGGCATTGGTTTATCTCTCTATCT  100

seq1  ACACCTTATGTGGGAGGGTGGGTTGGAATTTTTTTCTACTTTGTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTATGTGGGAGGGTGGGTTGGAATTTTTTTCTACTTTGTGGCCTT  150

seq1  GTCCATCTACTGTTGGTCTTTATGTAAAAATGTGATTGCCCCATCTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCTACTGTTGGTCTTTATGTAAAAATGTGATTGCCCCATCTGACC  200

seq1  ACATGTGCCTGCCACGACGAGTGATGAGGTTAGGAGAAGCCTCAGGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGCCTGCCACGACGAGTGATGAGGTTAGGAGAAGCCTCAGGGGCA  250

seq1  AAATATTAAGAGTACTTAAATCTTTTGGGACAATGTTCTAAATTCTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAGAGTACTTAAATCTTTTGGGACAATGTTCTAAATTCTCACC  300

seq1  ACAAGTTTCTCTTACTACTTCATAGCCTGAGTAAAGGCTGTTAAGTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTCTCTTACTACTTCATAGCCTGAGTAAAGGCTGTTAAGTAGAA  350

seq1  TATTTTTGTTAAAGATGATTTTGAAGTTCTTATCTCCTTCTGCTGGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTTAAAGATGATTTTGAAGTTCTTATCTCCTTCTGCTGGCTTT  400

seq1  CATCAACTACCAGAGTCTTTACATCAAAATCCTGGTTTGGTGGTTCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTACCAGAGTCTTTACATCAAAATCCTGGTTTGGTGGTTCAGAA  450

seq1  AAAAGTTAAATATGCTATCATGTCAGTTCTTGAGGTTTTAGCCACACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAAATATGCTATCATGTCAGTTCTTGAGGTTTTAGCCACACACT  500

seq1  ATCAAGTGTGTACAGCACTTTAAATGCTGGCTTCCCATCTTCCTCCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGTGTACAGCACTTTAAATGCTGGCTTCCCATCTTCCTCCAGAG  550

seq1  GCCTTCCAGAAGCGTTGTTAAGTGGGCCCGGGGGCTAGCACGGGATTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCAGAAGCGTTGTTAAGTGGGCCCGGGGGCTAGCACGGGATTCCC  600

seq1  AGTGGTGATGAGTGGGAATGTCTTGCCCTCGCTGATTCAGTGATGAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGATGAGTGGGAATGTCTTGCCCTCGCTGATTCAGTGATGAGGTA  650

seq1  GTTTTGAATCTTGGCATGACTCTTTCAGCTC-TTGGAATTCCATAAAAAC  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTTTGAATCTTGGCATGACTCTTTCAGCTCTTTGGAATTCCATAAAAAC  700

seq1  AACATCATCGTCATGGAGCCTCAATGTGCAGCAGCTGCACTGAGTG-TTT  748
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AACATCATCGTCATGGAGCCTCAATGTGCAGCAGCTGCACTGAGTGTTTT  750

seq1  TGATGTCTTCGCAGAAGGCGGACAAGGGCTTCTCTTTGAAATGTGTGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTTCGCAGAAGGCGGACAAGGGCTTCTCTTTGAAATGTGTGAGG  800

seq1  CGACTTGAGATGCCGCTGCGCACATGGAGTTAATTAGTCCTTCCTGGGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTGAGATGCCGCTGCGCACATGGAGTTAATTAGTCCTTCCTGGGAC  850

seq1  TGGATGTCCGC-TTGTTGCAGCTGAA-TTCTCA-TTCCACTCACCCATAA  895
      ||||||||||| |||||||||||||| |||||| |||||||||||||| |
seq2  TGGATGTCCGCTTTGTTGCAGCTGAATTTCTCATTTCCACTCACCCATTA  900

seq1  CTAGAAACACCTCGCTTCAAACGGGTTTCTTCAAAGAAAGAGGGGTTTCG  945
      |||||||||||| ||||| ||||||||||||  |||||||||||||||||
seq2  CTAGAAACACCTTGCTTC-AACGGGTTTCTTTCAAGAAAGAGGGGTTTCG  949

seq1  GGTTCTATGTTTTACA-GCTTTTTGATGTTGGTTTCCCTTTAACTGAGAG  994
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  GGTTCTATGTTTTACATGCTTTTTGATGTTGGTTTCCCTTT-ACTGAGAG  998

seq1  GACCTCATGTTTATACAACTGTTATTATTAAGCAAACATAGCTGGCCCCA  1044
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  GACCTCATGTTTATACAACTGTTATTATTAGGCAAACATAGCT-GCCCCA  1047

seq1  CCAAGGCTCCTTTTGTACCAGGCTGGTTAGGCTGGCCATCCGAGATGAGA  1094
      |||||||||| ||||||||||||||| |||||| ||||  ||||||||||
seq2  CCAAGGCTCC-TTTGTACCAGGCTGGGTAGGCTTGCCAATCGAGATGAGA  1096

seq1  TGTGTGGAATAGATCTTGCTTCTC-AGACCCCC  1126
      |||||| ||  ||||||||||||| ||||||||
seq2  TGTGTGAAAATGATCTTGCTTCTCAAGACCCCC  1129