BAC Information

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BAC

Clone NameB6Ng01-167D04
Chromosome14 (Build37)
Map Location 69,275,903 - 69,277,011
singlet/doubletsinglet
Overlap genenone
Upstream geneCdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072, Adam7, Adamdec1, Adam28, LOC641033
Downstream geneLOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167D04.bB6Ng01-167D04.g
ACCDH958759DH958760
length1,1311,125
definitionDH958759|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D04, 5' end.DH958760|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgctaccactggcaaggcactggcagacaggccagcctgttc
tcagactggaagattctctgacccagaacactgaaatctctccacttggc
tctctaagttcccatggcaggttgttgccatgccagccccatgctgccaa
attcccatgactagtttgggtggacttcttgcaaacccatgttttgctgc
agtacctttctggaacccagttgagtcaccaaccacataaaggaaaacac
catataaagtttagaatcagcaggtaacacaatcactgggtgcagcaact
agcatcctaatttgtaagctattctaagttacaaatccttcatcaggatc
taatacccgaactggaggcctctctgcctacattttgtcctccatcatcc
tcctatccaaaagtccctgtccttttctcccacttcccctctttctctct
ctgacctggaagtcccacctactcacccactgattggctccttgaaatct
taattcattaggggaaggttctgccaaattcagatccagtttcatcccca
ctgtttgtaatatgaatcttgaaaagtgattatcgtgtaggggatctttc
ttcagatgatctttagctcagtgaagccagagtttatagggaacaatgta
gtcacttcactttacaaacaaatgtccaatgtatacggcgattgctcccc
ataaagcagttttgaatcaactgctggttgctgcttattgtgcaacatca
gaactcactgatatctatacgagatctaagacaaagtcactcagtgagac
atgaaaagagctacagcaaggaggaaggtacacactggaggaattgtacc
tctgtatgagtattcccattcaagagccctgtgctcagtctcctcttgct
ggggcatctattctgtaaccttctggcttctagagagtgcgaggaagacc
atgcatttgcagcatcatgtagggttctggcaattcttagctatcccaaa
gatccacttgacatttctgtcattattcttttcccctcacttctattcat
cattggggtttttataatctaagttcatcaaatgttctggaactctgctc
tgacagcattctttccacggcgtctgtgtaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggtttatct
atcttgttgattttctgaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttgggttgatttcacccctgaagtttgat
tatttcctgccgtctactcctcttgggtgaatttgctttcttttttttct
agggcttttaagatgtgttggcaagctgctagtatgtgctgtcttcctgt
tcttcttggaggcactcagagctatgagttccctcttagaatgctttcat
ggtcccatagttgggtacgtgtgctcatttcttaaactctaaaaagtctt
aatttctttcttaattcgtcctgaccaaggtatcactgagaaggtgttat
tccattccaagtcaaggttgctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69275903_69277011
seq2: B6Ng01-167D04.b_72_1177 (reverse)

seq1  TTACACAGACGCCGTGGAA--GATGCTGTCAGAGCAGAGTTCCAGAACAA  48
      |||||||||||||||||||   |||||||||||||||||||||||||| |
seq2  TTACACAGACGCCGTGGAAAGAATGCTGTCAGAGCAGAGTTCCAGAAC-A  49

seq1  TTTGAATGAACTTAGAATTTAATAAAAACCCAATGATGAATAGAAGTGAG  98
      |||| |||||||||||  |||  |||| ||||||||||||||||||||||
seq2  TTTG-ATGAACTTAGA--TTATAAAAACCCCAATGATGAATAGAAGTGAG  96

seq1  GGG-AAAGAATAATGACAGAAATTGTCAAAGTGGATCTTTGGGATAGCTA  147
      ||| |||||||||||||||||| |||| ||||||||||||||||||||||
seq2  GGGAAAAGAATAATGACAGAAA-TGTC-AAGTGGATCTTTGGGATAGCTA  144

seq1  AGAATTGCCAGAACCCTACATGATGCTGCAAATGCATGGTCTTCCTCGCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGCCAGAACCCTACATGATGCTGCAAATGCATGGTCTTCCTCGCA  194

seq1  CTCTCTAGAAGCCAGAAGGTTACAGAATAGATGCCCCAGCAAGAGGAGAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTAGAAGCCAGAAGGTTACAGAATAGATGCCCCAGCAAGAGGAGAC  244

seq1  TGAGCACAGGGCTCTTGAATGGGAATACTCATACAGAGGTACAATTCCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACAGGGCTCTTGAATGGGAATACTCATACAGAGGTACAATTCCTC  294

seq1  CAGTGTGTACCTTCCTCCTTGCTGTAGCTCTTTTCATGTCTCACTGAGTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTACCTTCCTCCTTGCTGTAGCTCTTTTCATGTCTCACTGAGTG  344

seq1  ACTTTGTCTTAGATCTCGTATAGATATCAGTGAGTTCTGATGTTGCACAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCTTAGATCTCGTATAGATATCAGTGAGTTCTGATGTTGCACAA  394

seq1  TAAGCAGCAACCAGCAGTTGATTCAAAACTGCTTTATGGGGAGCAATCGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCAACCAGCAGTTGATTCAAAACTGCTTTATGGGGAGCAATCGC  444

seq1  CGTATACATTGGACATTTGTTTGTAAAGTGAAGTGACTACATTGTTCCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATACATTGGACATTTGTTTGTAAAGTGAAGTGACTACATTGTTCCCT  494

seq1  ATAAACTCTGGCTTCACTGAGCTAAAGATCATCTGAAGAAAGATCCCCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTCTGGCTTCACTGAGCTAAAGATCATCTGAAGAAAGATCCCCTA  544

seq1  CACGATAATCACTTTTCAAGATTCATATTACAAACAGTGGGGATGAAACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATAATCACTTTTCAAGATTCATATTACAAACAGTGGGGATGAAACT  594

seq1  GGATCTGAATTTGGCAGAACCTTCCCCTAATGAATTAAGATTTCAAGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGAATTTGGCAGAACCTTCCCCTAATGAATTAAGATTTCAAGGAG  644

seq1  CCAATCAGTGGGTGAGTAGGTGGGACTTCCAGGTCAGAGAGAGAAAGAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGTGGGTGAGTAGGTGGGACTTCCAGGTCAGAGAGAGAAAGAGG  694

seq1  GGAAGTGGGAGAAAAGGACAGGGACTTTTGGATAGGAGGATGATGGAGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGGGAGAAAAGGACAGGGACTTTTGGATAGGAGGATGATGGAGGA  744

seq1  CAAAATGTAGGCAGAGAGGCCTCCAGTTCGGGTATTAGATCCTGATGAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTAGGCAGAGAGGCCTCCAGTTCGGGTATTAGATCCTGATGAAG  794

seq1  GATTTGTAACTTAGAATAGCTTACAAATTAGGATGCTAGTTGCTGCACCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTAACTTAGAATAGCTTACAAATTAGGATGCTAGTTGCTGCACCC  844

seq1  AGTGATTGTGTTACCTGCTGATTCTAAACTTTATATGGTGTTTTCCTTTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTGTGTTACCTGCTGATTCTAAACTTTATATGGTGTTTTCCTTTA  894

seq1  TGTGGTTGGTGACTCAACTGGGTTCCAGAAAGGTACTGCAGCAAAACATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGGTGACTCAACTGGGTTCCAGAAAGGTACTGCAGCAAAACATG  944

seq1  GGTTTGCAAGAAGTCCACCCAAACTAGTCATGGGAATTTGGCAGCATGGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCAAGAAGTCCACCCAAACTAGTCATGGGAATTTGGCAGCATGGG  994

seq1  GCTGGCATGGCAACAACCTGCCATGGGAACTTAGAGAGCCAAGTGGAGAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATGGCAACAACCTGCCATGGGAACTTAGAGAGCCAAGTGGAGAG  1044

seq1  ATTTCAGTGTTCTGGGTCAGAGAATCTTCCAGTCTGAGAACAGGCTGGCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTGTTCTGGGTCAGAGAATCTTCCAGTCTGAGAACAGGCTGGCC  1094

seq1  TGTCTGCCAGTG  1109
      ||||||||||||
seq2  TGTCTGCCAGTG  1106