BAC Information

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BAC

Clone NameB6Ng01-167E04
Chromosome14 (Build37)
Map Location 112,355,743 - 112,465,665
singlet/doubletdoublet
Overlap genenone
Upstream geneEG622052, LOC100043491, LOC100043494, Slitrk5, LOC100043501
Downstream geneEG223186, LOC100043509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E04.bB6Ng01-167E04.g
ACCDH958805DH958806
length1,1491,166
definitionDH958805|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E04, 5' end.DH958806|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,355,743 - 112,356,901)(112,464,496 - 112,465,665)
sequence
gaattcacttaaacatatcccttcaatgatatacaattgctcttagaaag
tcgataaaattcctaaatattactcaaagattttaatcattcatgctcat
gtacacttctaatttattttctacctacacgtagtagttctattaaataa
tatttataataaaataatatataattaggtttatgatttaaaattatatt
atttttatgtacacaaatgacaatttctcaaataactttttattgctgtc
tatttttaggagatgataaaggcctcaatagacagtctattaagtagact
tctttgagtttgattctatatgcatgttgtgacagtgaacttcagaaaaa
gtcatccattattgttgagggtagtgacattttttattaagtcttattct
agaatttaggtaattctctgatcttattctaatgtgagttaaagtatttt
tagactctcaatatcatggaaagggcactcttcattaattaaggcctgtc
atgacttaatgcgttactggagattgctgaacatggaaagctcatttaag
acataaaatgtataatcacccctcataggctagtcattccttccttttca
caatatatttaggccgtgctttctgagacttcattatttgttattttgat
agtccaagaatgaaaacataaaaatccctcccagaatttattcaacatat
taaattcaatttaaaaaattatttctttaatttttgagattgtaataaaa
ctacagaatttttctatttttttttatctttcaagaccaacatggcccct
ttcttttacactcttttagattttcattgcttccttttaagttaattatc
gttatatacatgtaagtatttatgtataaatatatattcctaaacataaa
agtacatcctacccagtacatataatgtcacatgtatgtatgttttcatg
ttgatcatttggaattggataccaattggcctgctcactcttccctggaa
aagactattttcccacgttcattataaatattagatgatgattgagtagg
tatcttaaacgcatcactgaatatggagcttatataagactctaggagta
ggagtgtcatgctcacgtcattcctgaacatgcagttacctctggacta
gaattcaaaccgtagttacaaaattactcactgacacaaaactcctttcc
tgattccatcttaaattattagttattactcaattaatttctctaaaatt
gcttctagcacataatacaaacatatctcatcgtactgtgtcctcattat
agagctcaggtaagtagccaacacaggttcccaagagcagcgtaatggca
cagaagataagtattcagcaaatcctatttgtggttgctagaaaaatgtt
ttgtttatgtccagcatcatttgtctgcagaataatataagcagtcaatt
gctgcagagacacttggatgtcttcaggggaaatatattatgtttttaag
gcaaggaagagcaactatactcactgtgtgcaatttcttggctatttcat
cttttttaagttatgaccatccatttctgtaaatatgatctctttaaata
tagagttaaatcaggaaatcatgtataattcagcttaatatatgttttaa
tagcttttattgttgtaatagatgttacccacttctacgtgtacctgaaa
aggacataaaaattccaactctagtgttcaaatttagagcagagacttgg
agactctaattcaatttctcagtgtcacagccagaaccagattccaggtc
ttagtcttacattattatttctctaacaccactctaaatatttcataatt
tggtactgtatgaactcttggacctgactatggctaacagtttagaagaa
agtgaattttccaaaactactgtgtattaattactactccttgttaaaat
tctggctagcttcataaaaacactcactccaaaaaacaaagtagctgtgt
ttaataaaatagccatcatataagttaaaaatcactaatataaggagaat
ttcagtatgaggattgtagtattgtgagtattttcacatgacgttttgtt
ctgtttcagtaccataaagggcagacttatttctgtaagataacatctat
cactgattcctatttatgcattaaattaaataattagaaatatattttta
ttatacttcaaggcacaaattcataataatagttgatttttattatttag
tgtttgtgatgtatggagattggatgccatctggtatacaatggtcatac
actaattccacgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112355743_112356901
seq2: B6Ng01-167E04.b_42_1190

seq1  GAATTCACTTAAACATATCCCTTCAATGATATACAATTGCTCTTAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAACATATCCCTTCAATGATATACAATTGCTCTTAGAAAG  50

seq1  TCGATAAAATTCCTAAATATTACTCAAAGATTTTAATCATTCATGCTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATAAAATTCCTAAATATTACTCAAAGATTTTAATCATTCATGCTCAT  100

seq1  GTACACTTCTAATTTATTTTCTACCTACACGTAGTAGTTCTATTAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTTCTAATTTATTTTCTACCTACACGTAGTAGTTCTATTAAATAA  150

seq1  TATTTATAATAAAATAATATATAATTAGGTTTATGATTTAAAATTATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATAAAATAATATATAATTAGGTTTATGATTTAAAATTATATT  200

seq1  ATTTTTATGTACACAAATGACAATTTCTCAAATAACTTTTTATTGCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATGTACACAAATGACAATTTCTCAAATAACTTTTTATTGCTGTC  250

seq1  TATTTTTAGGAGATGATAAAGGCCTCAATAGACAGTCTATTAAGTAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGGAGATGATAAAGGCCTCAATAGACAGTCTATTAAGTAGACT  300

seq1  TCTTTGAGTTTGATTCTATATGCATGTTGTGACAGTGAACTTCAGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGTTTGATTCTATATGCATGTTGTGACAGTGAACTTCAGAAAAA  350

seq1  GTCATCCATTATTGTTGAGGGTAGTGACATTTTTTATTAAGTCTTATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCATTATTGTTGAGGGTAGTGACATTTTTTATTAAGTCTTATTCT  400

seq1  AGAATTTAGGTAATTCTCTGATCTTATTCTAATGTGAGTTAAAGTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAGGTAATTCTCTGATCTTATTCTAATGTGAGTTAAAGTATTTT  450

seq1  TAGACTCTCAATATCATGGAAAGGGCACTCTTCATTAATTAAGGCCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTCAATATCATGGAAAGGGCACTCTTCATTAATTAAGGCCTGTC  500

seq1  ATGACTTAATGCGTTACTGGAGATTGCTGAACATGGAAAGCTCATTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTAATGCGTTACTGGAGATTGCTGAACATGGAAAGCTCATTTAAG  550

seq1  ACATAAAATGTATAATCACCCCTCATAGGCTAGTCATTCCTTCCTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATGTATAATCACCCCTCATAGGCTAGTCATTCCTTCCTTTTCA  600

seq1  CAATATATTTAGGCCGTGCTTTCTGAGACTTCATTATTTGTTATTTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATTTAGGCCGTGCTTTCTGAGACTTCATTATTTGTTATTTTGAT  650

seq1  AGTCCAAGAATGAAAACATAAAAATCCCTCCCAGAATTTATTCAACATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAGAATGAAAACATAAAAATCCCTCCCAGAATTTATTCAACATAT  700

seq1  TAAATTCAATTTAAAAAATTATTTCTTTAATTTTTGAGATTGTAATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAATTTAAAAAATTATTTCTTTAATTTTTGAGATTGTAATAAAA  750

seq1  CTACAGAATTTTTCTATTTTTTTTTATCTTTCAAGACCAACATGGCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAATTTTTCTATTTTTTTTTATCTTTCAAGACCAACATGGCCCCT  800

seq1  TTCTTTTACACTCTTTTAGATTTTCATTGCTTCCTTTTAAGTTAATTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTACACTCTTTTAGATTTTCATTGCTTCCTTTTAAGTTAATTATC  850

seq1  GTTATATACATGTAAGTATTTATGTATAAATATATATTCCTAAACATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATACATGTAAGTATTTATGTATAAATATATATTCCTAAACATAAA  900

seq1  ATTACATCCTACCCAGTACATATAATGTCACATGTATGTATGTTTTCAGG  950
      | ||||||||||||||||||||||||||||||||||||||||||||||  
seq2  AGTACATCCTACCCAGTACATATAATGTCACATGTATGTATGTTTTCA-T  949

seq1  GTTGATCATTTGGAATTGGATACCAATTGGCCTGCTCACTCTTCCCTGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATCATTTGGAATTGGATACCAATTGGCCTGCTCACTCTTCCCTGGA  999

seq1  AAAGACTATTTTTCCCACTTTCAATATAAAATAATTAGATGAATGATTGA  1050
      |||||||| ||||||||| |||| ||||||   |||||||| ||||||||
seq2  AAAGACTA-TTTTCCCACGTTCATTATAAA--TATTAGATG-ATGATTGA  1045

seq1  GTAGGTAATCTTAAAAACGCATCACTGAATATGGAGC-TATATAAGACTC  1099
      |||||| |||||  ||||||||||||||||||||||| ||||||||||||
seq2  GTAGGT-ATCTT--AAACGCATCACTGAATATGGAGCTTATATAAGACTC  1092

seq1  TAGGAATTAGGAGTGTCCATGCTAAAGTCATTCACTGAACATGCAGTTAC  1149
      |||| | ||||||||| |||||| | ||||||| ||||||||||||||||
seq2  TAGG-AGTAGGAGTGT-CATGCTCACGTCATTC-CTGAACATGCAGTTAC  1139

seq1  CTCTGAACTA  1159
      ||||| ||||
seq2  CTCTGGACTA  1149

seq1: chr14_112464496_112465665
seq2: B6Ng01-167E04.g_66_1231 (reverse)

seq1  ACCT-GTGGAATTAAGTGTATGAACAAATGTATA-CAGAT-GCATCCATA  47
      |||| |||||||| |||||||| || | |||||| ||||| |||||||  
seq2  ACCTCGTGGAATT-AGTGTATG-ACCATTGTATACCAGATGGCATCCAAT  48

seq1  CTTCATACATCACAAACACTAAATAATAAATATCAACTTATATTATGATT  97
      || ||||||||||||||||||||||||||| |||||||  |||||||| |
seq2  CTCCATACATCACAAACACTAAATAATAAAAATCAACTATTATTATGAAT  98

seq1  TTGTGCCTTGAAGTAATATAAAATATAT-TTTCTAATTATTTTAATTTTA  146
      |||||||||||||||  |||||| |||| |||||||||||||  | ||||
seq2  TTGTGCCTTGAAGTATAATAAAA-ATATATTTCTAATTATTT--AATTTA  145

seq1  ATGCAT-AATAGGAATCAGTGATAGATGTTATCTTTAACAGAAATAAGTC  195
      |||||| ||||||||||||||||||||||||||||  |||||||||||||
seq2  ATGCATAAATAGGAATCAGTGATAGATGTTATCTT--ACAGAAATAAGTC  193

seq1  TGCCCTTTATGGTACTGAAACAGAACAAAAACGTCATGTG-AAATACTCA  244
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TGCCCTTTATGGTACTGAAACAGAAC-AAAACGTCATGTGAAAATACTCA  242

seq1  CAATACTACAATCCTCATACTGAAATTCTCCTTATATTAGTGATTTTTAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTACAATCCTCATACTGAAATTCTCCTTATATTAGTGATTTTTAA  292

seq1  CTTTATATTGATGGCTATTTTATTAAACACAGCTACTTTGTTTTTTGGAG  344
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTATA-TGATGGCTATTTTATTAAACACAGCTACTTTGTTTTTTGGAG  340

seq1  TGAGTGTTTTTATGAAGCTAGCCAGAATTTTAACAAGGAGTAGTAATTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTTTTATGAAGCTAGCCAGAATTTTAACAAGGAGTAGTAATTAA  390

seq1  TACACAGTAGTTTTGGAAAATTCACTTTCTTCTAAACTGTTAGCCATAGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTAGTTTTGGAAAATTCACTTTCTTCTAAACTGTTAGCCATAGT  440

seq1  CAGGTCCAAGAGTTCATACAGTACCAAATTATGAAATATTTAGAGTGGTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCAAGAGTTCATACAGTACCAAATTATGAAATATTTAGAGTGGTG  490

seq1  TTAGAGAAATAATAATGTAAGACTAAGACCTGGAATCTGGTTCTGGCTGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAAATAATAATGTAAGACTAAGACCTGGAATCTGGTTCTGGCTGT  540

seq1  GACACTGAGAAATTGAATTAGAGTCTCCAAGTCTCTGCTCTAAATTTGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAGAAATTGAATTAGAGTCTCCAAGTCTCTGCTCTAAATTTGAA  590

seq1  CACTAGAGTTGGAATTTTTATGTCCTTTTCAGGTACACGTAGAAGTGGGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAGTTGGAATTTTTATGTCCTTTTCAGGTACACGTAGAAGTGGGT  640

seq1  AACATCTATTACAACAATAAAAGCTATTAAAACATATATTAAGCTGAATT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTATTACAACAATAAAAGCTATTAAAACATATATTAAGCTGAATT  690

seq1  ATACATGATTTCCTGATTTAACTCTATATTTAAAGAGATCATATTTACAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGATTTCCTGATTTAACTCTATATTTAAAGAGATCATATTTACAG  740

seq1  AAATGGATGGTCATAACTTAAAAAAGATGAAATAGCCAAGAAATTGCACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATGGTCATAACTTAAAAAAGATGAAATAGCCAAGAAATTGCACA  790

seq1  CAGTGAGTATAGTTGCTCTTCCTTGCCTTAAAAACATAATATATTTCCCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTATAGTTGCTCTTCCTTGCCTTAAAAACATAATATATTTCCCC  840

seq1  TGAAGACATCCAAGTGTCTCTGCAGCAATTGACTGCTTATATTATTCTGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACATCCAAGTGTCTCTGCAGCAATTGACTGCTTATATTATTCTGC  890

seq1  AGACAAATGATGCTGGACATAAACAAAACATTTTTCTAGCAACCACAAAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATGATGCTGGACATAAACAAAACATTTTTCTAGCAACCACAAAT  940

seq1  AGGATTTGCTGAATACTTATCTTCTGTGCCATTACGCTGCTCTTGGGAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGCTGAATACTTATCTTCTGTGCCATTACGCTGCTCTTGGGAAC  990

seq1  CTGTGTTGGCTACTTACCTGAGCTCTATAATGAGGACACAGTACGATGAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGGCTACTTACCTGAGCTCTATAATGAGGACACAGTACGATGAG  1040

seq1  ATATGTTTGTATTATGTGCTAGAAGCAATTTTAGAGAAATTAATTGAGTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTGTATTATGTGCTAGAAGCAATTTTAGAGAAATTAATTGAGTA  1090

seq1  ATAACTAATAATTTAAGATGGAATCAGGAAAGGAGTTTTGTGTCAGTGAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAATAATTTAAGATGGAATCAGGAAAGGAGTTTTGTGTCAGTGAG  1140

seq1  TAATTTTGTAACTACGGTTTGAATTC  1170
      ||||||||||||||||||||||||||
seq2  TAATTTTGTAACTACGGTTTGAATTC  1166