BAC Information

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BAC

Clone NameB6Ng01-169L06
Chromosome14 (Build37)
Map Location 70,787,888 - 70,909,822
singlet/doubletdoublet
Overlap genePiwil2, Polr3d, Phyhip, Bmp1
Upstream geneNkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450
Downstream geneSftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169L06.bB6Ng01-169L06.g
ACCDH960611DH960612
length1,068406
definitionDH960611|Mus musculus domesticus DNA, BAC clone: B6Ng01-169L06, 5' end.DH960612|Mus musculus domesticus DNA, BAC clone: B6Ng01-169L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,908,760 - 70,909,822)(70,787,888 - 70,788,299)
sequence
gaattcaggctcagaatccctgagaaagcacatagcttttatccaaactt
cagctcccttgggtccccacagttcctgggaaatgagtgcctcattgtct
tagtttggagtcctcgcccattcctgctccctggggcatctccagacact
tagaacacagcctcacagctcttacagaactttatagttattttacacag
ataccacgaagagtgaattagcagataccgagtcattgctcctaggagaa
acgtaagcttccaccagactttggtcacattttttttttttttttttttg
gtaaactgatcattatatgaccacatttatgtgtgtttcacttaaagaca
ccttatttaatataaagttagttcattaatactgaactcacagctagcag
cattgacttcagcccaagcaaatatattgaatgtgtgtgtttcttgggaa
ggtttatcccagcttttgtgttatgtttttgtatgtgtgtgtgttaatgg
agattgaacctggggcctcatgcattccaggcaagcatttaccactgagg
tgcatacccagctccatttttacgttcttgttttgagataggggctctct
aagttgcccaggatggctttaaactcagtgtgaacataggctggccttga
actcataaccctcctgtctcaccgtttcaggagctggatgacaggtttgc
atcaccatgagcccagctttgggaacacaagacagcgcatgagcactttg
cttaggaaccattttaaataaccaaaatttttaaaaaatttttttacaaa
gtggttctcagttcacctaaaagaaacaggcagacagaacacctttgttc
gaccttggctgggctgtgttaacattgattggatctatccaacttttttt
ttttttttttctggcctgtacttgtcgatggatgttcacaaaagcctgaa
ccgtatcgatttgagactagcaaagtaaatttttagcaaagtaagcagaa
ttggcgaatcagaatctcaaaataatgggtcgcattatcctgtgttcttc
ttcctccccctggctact
actttgtagaccaggctggccttgaactcagaaatccacctgcctctgcc
tcccaagtgctggggttaaaggcgcgcgccaccacgcccggcttgtatcc
tttcttaaaatgagccccaagcatggctagaacagcttttagtgggttct
ttatcaaaactgagcaagatttgggaaaccatgccaaacttccggctgct
aggacttccaagtgggacaagcttgggtaaagtaaacttcattgttcagc
cctaaattcttgtttcaacaatgatatttctgaaattaatatttgctagg
aaaaaacattagatatgaataacaggagacaaaaaaaattaggagacttc
catctagaaaataagaaaaagtaaaagaaacaaataagaggaactcttca
aaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70908760_70909822
seq2: B6Ng01-169L06.b_46_1113 (reverse)

seq1  AGTAGCCAGGGGGAGGAGGA--GACACAGGATAATGCGACCCATTATTTG  48
      ||||||||||||||||| ||   |||||||||||||||||||||||||| 
seq2  AGTAGCCAGGGGGAGGAAGAAGAACACAGGATAATGCGACCCATTATTTT  50

seq1  TAGATTCTGGATTCG-CAAATCTGCCTACTTTGCTAAAAATTTAC-TTGC  96
       ||||||| |||||| ||| ||||| ||||||||||||||||||| ||||
seq2  GAGATTCT-GATTCGCCAATTCTGCTTACTTTGCTAAAAATTTACTTTGC  99

seq1  TAGTCTCAAATCGATACGG-TCAGGCTTTCGTGAACATCCATCGACAAGT  145
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  TAGTCTCAAATCGATACGGTTCAGGCTTTTGTGAACATCCATCGACAAGT  149

seq1  ACAGGGCAGAAAAAAAAAAAAAAAAAAGTTGGAT-GATCCAATCAATGTG  194
      ||||| ||| |||||||||||||||||||||||| |||||||||||||| 
seq2  ACAGGCCAG-AAAAAAAAAAAAAAAAAGTTGGATAGATCCAATCAATGTT  198

seq1  TACACAGCCCAGCCAAGGTCGAAC-AAGGTGTTCTGTCTGCCTGTTTCTT  243
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACACAGCCCAGCCAAGGTCGAACAAAGGTGTTCTGTCTGCCTGTTTCTT  248

seq1  TTAGGTGAACTGAGAACCACTTTGTAAAAAAATTTTTTAAAAATTTTGGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGAACTGAGAACCACTTTGTAAAAAAATTTTTTAAAAATTTTGGT  298

seq1  TATTTAAAATGGTTCCTAAGCAAAGTGCTCATGCGCTGTCTTGTGTTCCC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAATGGTTCCTAAGCAAAGTGCTCATGCGCTGTCTTGTGTTCCC  348

seq1  AAAGCTGGGCTCATGGTGATGCAAACCTGTCATCCAGCTCCTGAAACGGT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGGGCTCATGGTGATGCAAACCTGTCATCCAGCTCCTGAAACGGT  398

seq1  GAGACAGGAGGGTTATGAGTTCAAGGCCAGCCTATGTTCACACTGAGTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGAGGGTTATGAGTTCAAGGCCAGCCTATGTTCACACTGAGTTT  448

seq1  AAAGCCATCCTGGGCAACTTAGAGAGCCCCTATCTCAAAACAAGAACGTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATCCTGGGCAACTTAGAGAGCCCCTATCTCAAAACAAGAACGTA  498

seq1  AAAATGGAGCTGGGTATGCACCTCAGTGGTAAATGCTTGCCTGGAATGCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAGCTGGGTATGCACCTCAGTGGTAAATGCTTGCCTGGAATGCA  548

seq1  TGAGGCCCCAGGTTCAATCTCCATTAACACACACACATACAAAAACATAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCCCAGGTTCAATCTCCATTAACACACACACATACAAAAACATAA  598

seq1  CACAAAAGCTGGGATAAACCTTCCCAAGAAACACACACATTCAATATATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGCTGGGATAAACCTTCCCAAGAAACACACACATTCAATATATT  648

seq1  TGCTTGGGCTGAAGTCAATGCTGCTAGCTGTGAGTTCAGTATTAATGAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGCTGAAGTCAATGCTGCTAGCTGTGAGTTCAGTATTAATGAAC  698

seq1  TAACTTTATATTAAATAAGGTGTCTTTAAGTGAAACACACATAAATGTGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTATATTAAATAAGGTGTCTTTAAGTGAAACACACATAAATGTGG  748

seq1  TCATATAATGATCAGTTTACCAAAAAAAAAAAAAAAAAAAATGTGACCAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAATGATCAGTTTACCAAAAAAAAAAAAAAAAAAAATGTGACCAA  798

seq1  AGTCTGGTGGAAGCTTACGTTTCTCCTAGGAGCAATGACTCGGTATCTGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGTGGAAGCTTACGTTTCTCCTAGGAGCAATGACTCGGTATCTGC  848

seq1  TAATTCACTCTTCGTGGTATCTGTGTAAAATAACTATAAAGTTCTGTAAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACTCTTCGTGGTATCTGTGTAAAATAACTATAAAGTTCTGTAAG  898

seq1  AGCTGTGAGGCTGTGTTCTAAGTGTCTGGAGATGCCCCAGGGAGCAGGAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGAGGCTGTGTTCTAAGTGTCTGGAGATGCCCCAGGGAGCAGGAA  948

seq1  TGGGCGAGGACTCCAAACTAAGACAATGAGGCACTCATTTCCCAGGAACT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGAGGACTCCAAACTAAGACAATGAGGCACTCATTTCCCAGGAACT  998

seq1  GTGGGGACCCAAGGGAGCTGAAGTTTGGATAAAAGCTATGTGCTTTCTCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGACCCAAGGGAGCTGAAGTTTGGATAAAAGCTATGTGCTTTCTCA  1048

seq1  GGGATTCTGAGCCTGAATTC  1063
      ||||||||||||||||||||
seq2  GGGATTCTGAGCCTGAATTC  1068

seq1: chr14_70787888_70788299
seq2: B6Ng01-169L06.g_67_478

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGGTTAAAGGCGCGCGCCACCACGCCCGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGGTTAAAGGCGCGCGCCACCACGCCCGGCTT  100

seq1  GTATCCTTTCTTAAAATGAGCCCCAAGCATGGCTAGAACAGCTTTTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTTTCTTAAAATGAGCCCCAAGCATGGCTAGAACAGCTTTTAGTG  150

seq1  GGTTCTTTATCAAAACTGAGCAAGATTTGGGAAACCATGCCAAACTTCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTATCAAAACTGAGCAAGATTTGGGAAACCATGCCAAACTTCCG  200

seq1  GCTGCTAGGACTTCCAAGTGGGACAAGCTTGGGTAAAGTAAACTTCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGGACTTCCAAGTGGGACAAGCTTGGGTAAAGTAAACTTCATTG  250

seq1  TTCAGCCCTAAATTCTTGTTTCAACAATGATATTTCTGAAATTAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCTAAATTCTTGTTTCAACAATGATATTTCTGAAATTAATATTT  300

seq1  GCTAGGAAAAAACATTAGATATGAATAACAGGAGACAAAAAAAATTAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAAAAAACATTAGATATGAATAACAGGAGACAAAAAAAATTAGGA  350

seq1  GACTTCCATCTAGAAAATAAGAAAAAGTAAAAGAAACAAATAAGAGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCATCTAGAAAATAAGAAAAAGTAAAAGAAACAAATAAGAGGAAC  400

seq1  TCATCAAAAAAA  412
      || |||||||||
seq2  TCTTCAAAAAAA  412