BAC Information

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BAC

Clone NameB6Ng01-170I16
Chromosome14 (Build37)
Map Location 120,362,131 - 120,363,130
singlet/doubletsinglet
Overlap genenone
Upstream geneDnajc3a, Ugcgl2, Hs6st3, LOC619601, EG621324, LOC100043830
Downstream geneOxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837, Ranbp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170I16.bB6Ng01-170I16.g
ACCDH961229DH961230
length1,1921,084
definitionDH961229|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I16, 5' end.DH961230|Mus musculus domesticus DNA, BAC clone: B6Ng01-170I16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
atcaccgtcgttccccagctgatgagttctgaattcggcagttgaatcct
tctcaacagtctgctttacgggaacctttatcaccgtcgttccccagctg
atgagttctgaattcggcagttgaatccttctcaacagtctgtgttacgg
gaacctttataaacgtgatccgcagttctggttccggaatgagggatcct
ccttgcgccagtcccgagtttttttctcgtcccggaattcggcaccaatt
gttattagacgcgttctcacgaccggccaggaagaacaccacagaccaga
atcttctgcggcaaagctttattcttacatcttcaggaacagagtgcaag
aagcaagagagcaagaagcaagagagagagaaaagcaagagagagagaaa
agcaagcaagagagagagagagaacgaaaccccgtccctcttaaggagca
ttctccttcgcctcggacgtgtcactccctgattggctgcagcccatcgg
ccgagttgacgtcacggggaaggcagagcacaagtagtcataagataccc
ttggcacatgcgcagattatttgtttaccacttagaacacagctgtcagc
gccatcttgtaacggcgaatgtgggcgcggctcccaacacatatgactta
ggaccagctagaaaaagcctccaagagcccttcaaagcttttacctggca
ttgtacattccaggggacctgccagagctttcagaaaaatctcagaaacc
agtgggactgaaaagaggtgacctggagaactgtatggcatgcccttgcc
tctgcgtctgtgaggagggtggggactgagactaggaatccttatgacag
aagacctaacagtctgagcactgcatgggacagatgcggggaaaggtgga
cctcaaggacatgagtgtgtttgtctctgaagccatgatgacgaagaagg
gtttggggcagggcttcatcccccctttggtacaaccttcctttgagagt
aatttcctacttgaattctcagggacaaagaactctaagggaagacttca
gccttgtccataggaaagtgaaaagtccaccaagggggctgcatcacctt
agaatactattcaatttagattgaactctggcaactctggct
gaattcagaggccttgtgggtgtgcagttggcccttagtgtgtgtggaaa
cagctccatggggcctgttcaagagggaggctctaacagttaggagaggc
ttgagttggtcatctttgtcaccaacatcagtgctagtgtacactcctgc
gtttcagcagcacgtccaaaacagatgccaacaaaaagcccagtgaatag
ccagcaccccgtttagtttgataagtttatgttttagttcacatgtgaaa
tatattcaatttacttcatggcttctactaaaattgattttgtggtatag
atagggcatgtcactaaataaaaacaatccatgtctggtgtgagaccccg
agcttcttgtgaatgtggcgaggtgatagcgtccccaaggacagcagctg
ccatggggttcaccagtggtcatgattccccttcttactgagggcaacgg
aagccagcagcgtcttctccaagagtgtgtttgttatttgtctcagcgtt
gggatgacacacccaacaagagacaatttaagggaggatgtgtttatttt
gcttacagctcagggtctcattctatcaggatgtgggaaggtacgagagc
aggaggggaagtgggaggcatggcagaagtgggaggcgtggcagaagtgg
gaggcgtggcaggagcaggtccaacaagttagatcgaatccccaggcaag
agacagactgagcaggaaatgggaccaagctataaagcccacagtgaccc
atttcctcaagtgaggctcttcataaagactcgacaacctttctgtctta
gagtcttcattgttgtgaaagagacaccatgaccaaggcaactcttacaa
aggaagacatttcattggggctggctttcagtttcagaggttagtcgggt
atggatcatcacagcacacaggcagacatggagctgcagaaggagctgag
agtctcagcttgatttgagggcagaaagcacgggaaaaaaggtggcggga
aagaactcgagtctgggggaacctctgaatgttgaaaccaccgaacccta
atctgggtggggtcgacttgggtgtggaggcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120362131_120363130
seq2: B6Ng01-170I16.b_233_1235

seq1  CTGTGTTACGGGAACCTTTATAAACGTGATCCGCAGTTCTGGTTCCGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTACGGGAACCTTTATAAACGTGATCCGCAGTTCTGGTTCCGGAA  50

seq1  TGAGGGATCCTCCTTGCGCCAGTCCCGAGTTTTTTTCTCGTCCCGGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGATCCTCCTTGCGCCAGTCCCGAGTTTTTTTCTCGTCCCGGAATT  100

seq1  CGGCACCAATTGTTATTAGACGCGTTCTCACGACCGGCCAGGAAGAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACCAATTGTTATTAGACGCGTTCTCACGACCGGCCAGGAAGAACAC  150

seq1  CACAGACCAGAATCTTCTGCGGCAAAGCTTTATTCTTACATCTTCAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCAGAATCTTCTGCGGCAAAGCTTTATTCTTACATCTTCAGGAA  200

seq1  CAGAGTGCAAGAAGCAAGAGAGCAAGAAGCAAGAGAGAGAGAAAAGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCAAGAAGCAAGAGAGCAAGAAGCAAGAGAGAGAGAAAAGCAAG  250

seq1  AGAGAGAGAAAAGCAAGCAAGAGAGAGAGAGAGAACGAAACCCCGTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAAAAGCAAGCAAGAGAGAGAGAGAGAACGAAACCCCGTCCCT  300

seq1  CTTAAGGAGCATTCTCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAGCATTCTCCTTCGCCTCGGACGTGTCACTCCCTGATTGGCTG  350

seq1  CAGCCCATCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTAGTC  400

seq1  ATAAGATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACA  450

seq1  CAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGGCTCCCAACA  500

seq1  CATATGACTTAGGACCAGCTAGAAAAAGCCTCCAAGAGCCCTTCAAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGACTTAGGACCAGCTAGAAAAAGCCTCCAAGAGCCCTTCAAAGCT  550

seq1  TTTACCTGGCATTGTACATTCCAGGGGACCTGCCAGAGCTTTCAGAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGGCATTGTACATTCCAGGGGACCTGCCAGAGCTTTCAGAAAAA  600

seq1  TCTCAGAAACCAGTGGGACTGAAAAGAGGTGACCTGGAGAACTGTATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAACCAGTGGGACTGAAAAGAGGTGACCTGGAGAACTGTATGGC  650

seq1  ATGCCCTTGCCTCTGCGTCTGTGAGGAGGGTGGGGACTGAGACTAGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTGCCTCTGCGTCTGTGAGGAGGGTGGGGACTGAGACTAGGAAT  700

seq1  CCTTATGACAGAAGACCTAACAGTCTGAGCACTGCATGGGACAGATGCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGACAGAAGACCTAACAGTCTGAGCACTGCATGGGACAGATGCGG  750

seq1  GGAAAGGTGGACCTCAAGGACATGAGTGTGTTTGTCTCTGAAGCCATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGTGGACCTCAAGGACATGAGTGTGTTTGTCTCTGAAGCCATGAT  800

seq1  GACGAAAGAGGGTTTGGGGCAGGGCTTCACCACACCTTT-GTACAATCTT  849
      ||||||  ||||||||||||||||||||| | | ||||| |||||| |||
seq2  GACGAAGAAGGGTTTGGGGCAGGGCTTCATCCCCCCTTTGGTACAACCTT  850

seq1  CCTTTGAGA-TAA-TTCCTACTTGGAATTCTCAGGGACAAAG-ACTCT-A  895
      ||||||||| ||| ||||||||| |||||||||||||||||| ||||| |
seq2  CCTTTGAGAGTAATTTCCTACTT-GAATTCTCAGGGACAAAGAACTCTAA  899

seq1  GGGAAGGCACTTCCAGCTTGCCAATAGGAATGT-AAAAG-CCACCAAGGT  943
      ||||||  |||||   |||| | ||||||| || ||||| ||||||||| 
seq2  GGGAAG--ACTTCAGCCTTGTCCATAGGAAAGTGAAAAGTCCACCAAGGG  947

seq1  GGCTGCAATCCACCTAGAAATCTATTCAAATGTAGATCTGACTCT-GCAA  992
      |||||| |||  | |||||  |||||| ||| |||||   ||||| ||||
seq2  GGCTGC-ATCACCTTAGAATACTATTC-AATTTAGATTGAACTCTGGCAA  995

seq1  CTCTGGCT  1000
      ||||||||
seq2  CTCTGGCT  1003