BAC Information

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BAC

Clone NameB6Ng01-170O05
Chromosome14 (Build37)
Map Location 96,168,509 - 96,291,204
singlet/doubletdoublet
Overlap gene4921530L21Rik
Upstream geneLOC100043783, LOC677613, LOC100043784, LOC382931
Downstream geneKlhl1, LOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170O05.bB6Ng01-170O05.g
ACCDH961489DH961490
length1,0831,061
definitionDH961489|Mus musculus domesticus DNA, BAC clone: B6Ng01-170O05, 5' end.DH961490|Mus musculus domesticus DNA, BAC clone: B6Ng01-170O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,168,509 - 96,169,598)(96,290,139 - 96,291,204)
sequence
gaattcaaatatttcaaataaattcaccaaagagtattttttatcataaa
tgcatatattctcctgatatataaaattatatattaaattaagtatatta
aattaactgcagcagtttaataatagtgattgtggctaagacttacagaa
atatttctcctgaaaggaaaataataaagttacctatatatgaacaaatt
tttaacttgtactaaggtacatgaacttcctgaaattctatattgtttaa
aaattagtgttaggattgactatgcccttgtctcataatatcatagtgtc
acttgttctagcattttaggacatctgtgtggttaatgaaactggaaaac
aatctgcaaatttattgtgagactctactttccttttcaacaatagcatt
gttcaatatgaacctagccttatatggacataaattaaaagcatcatagt
gcacttataagccttaggtgtaatcacagcagaaacactgaaacaaacat
acaatataaagatttagggatgaagggatggcttagcaaactgtgtctca
tcaattgatttttaaattttattcttgtttataataccactatattgttt
ctcctttccctttcctctcttcatatatctttatttgatgttttaaaaat
acacaaactcttttgatttccctacacacacacacacacacacacacaca
cacaccagttacaaaacatgtaatgtttttcattatacatatatatatat
atatatatatatatatatatatatatatatataattatagtctactctgt
caacacccagtaatgtcacaagctacacccataagtctcaccaacaggat
tccctaatcataacctgatttctgagtggcagagtgacctagcaaatcac
cctgtgacaagagagtgactgtaattaaaatccatcccagggcaaagcta
taactgacaaatgaagaagaaagcttaagttatgttaaaaggggatttat
tagcctaaatggcagtaataacactctatgactaaatttattgacagggc
ttcatattctggagtcaatcatctttaatcaag
gaattcaacgatatgctcaattatataaaccatttgaacctaaccagggc
tacatacactctgtctggaaaaaaatgtcaaaagaaaaacagattactca
aatcttattatttccaaattattgtttcctttttcttaatttgttacaac
aaccttaaaatggctttatgcatataaagttatgtgtttacagatggtaa
tattggcaggtaggttaacttcactgtgtctcacaaaaataagctagtgg
ataattaagagactgtttaatcattatgccccatgtattaaagaacacca
attaataaattttagtagaaatagtcacattctcatgtggaactcattct
gaactctatattttaccatatacgaggctgcattttaatctgtccctggc
aagcaaagtaggaattttaacagttgaaaacacagaatctggaaatgtag
tccaatgacacagagctttgtgggcgtgtgcggactctgggtccattccc
agggctgtaatgcgtaagcatgaagagatagagagataaagatagaaaaa
atatcgtcattaatttatgattctgaaaattgtggcatttaacttaattt
ctaaatataccatcaacatcatatgtgtctaatttaggaaaaatagaatc
cataagtagactaaatgctgattccgtaaagtgacagagtgtcaagctat
ttagtaaataattgtcagctcccctgaagaatgacatttagataatccag
aaaaagggtttttctaatttaggctgttttctagcttctgtgaaatatat
taaaaaccatctttcagatcatggtggtcagaattttcccgagataaata
ctaaaacaatatcatttgatttctttttctttcttttgtataattttctt
tcattaaacttattagcggggtgaaaggatacaattctgtggtgtgtata
tgaaagcagtggaaactttgaggtcctttgccctccttttcgtgataatg
cattcaggcatcccacctaggttgttcagctttcttgccgcaaggatgtt
tatccctgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96168509_96169598
seq2: B6Ng01-170O05.b_48_1130

seq1  GAATTCAAATATTTCAAATAAATTCACCAAAGAGTATTTTTTATCATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATTTCAAATAAATTCACCAAAGAGTATTTTTTATCATAAA  50

seq1  TGCATATATTCTCCTGATATATAAAATTATATATTAAATTAAGTATATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATATTCTCCTGATATATAAAATTATATATTAAATTAAGTATATTA  100

seq1  AATTAACTGCAGCAGTTTAATAATAGTGATTGTGGCTAAGACTTACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACTGCAGCAGTTTAATAATAGTGATTGTGGCTAAGACTTACAGAA  150

seq1  ATATTTCTCCTGAAAGGAAAATAATAAAGTTACCTATATATGAACAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTCCTGAAAGGAAAATAATAAAGTTACCTATATATGAACAAATT  200

seq1  TTTAACTTGTACTAAGGTACATGAACTTCCTGAAATTCTATATTGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTGTACTAAGGTACATGAACTTCCTGAAATTCTATATTGTTTAA  250

seq1  AAATTAGTGTTAGGATTGACTATGCCCTTGTCTCATAATATCATAGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTGTTAGGATTGACTATGCCCTTGTCTCATAATATCATAGTGTC  300

seq1  ACTTGTTCTAGCATTTTAGGACATCTGTGTGGTTAATGAAACTGGAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTCTAGCATTTTAGGACATCTGTGTGGTTAATGAAACTGGAAAAC  350

seq1  AATCTGCAAATTTATTGTGAGACTCTACTTTCCTTTTCAACAATAGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCAAATTTATTGTGAGACTCTACTTTCCTTTTCAACAATAGCATT  400

seq1  GTTCAATATGAACCTAGCCTTATATGGACATAAATTAAAAGCATCATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATATGAACCTAGCCTTATATGGACATAAATTAAAAGCATCATAGT  450

seq1  GCACTTATAAGCCTTAGGTGTAATCACAGCAGAAACACTGAAACAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTATAAGCCTTAGGTGTAATCACAGCAGAAACACTGAAACAAACAT  500

seq1  ACAATATAAAGATTTAGGGATGAAGGGATGGCTTAGCAAACTGTGTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAAAGATTTAGGGATGAAGGGATGGCTTAGCAAACTGTGTCTCA  550

seq1  TCAATTGATTTTTAAATTTTATTCTTGTTTATAATACCACTATATTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGATTTTTAAATTTTATTCTTGTTTATAATACCACTATATTGTTT  600

seq1  CTCCTTTCCCTTTCCTCTCTTCATATATCTTTATTTGATGTTTTAAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCCCTTTCCTCTCTTCATATATCTTTATTTGATGTTTTAAAAAT  650

seq1  ACACAAACTCTTTTGATTTCCCTACACACACACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAACTCTTTTGATTTCCCTACACACACACACACACACACACACACA  700

seq1  CACACCAGTTAC-AAACATGTAATG-TTTTCATTATACATATATATATAT  748
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  CACACCAGTTACAAAACATGTAATGTTTTTCATTATACATATATATATAT  750

seq1  ATATATATATATATATATATATATATATATATAATTATAGTCTACTCTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATAATTATAGTCTACTCTGT  800

seq1  CAACACCCAGTAATGTCACAAGCTACACCCATAAGTCTCACCAACAGGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCCAGTAATGTCACAAGCTACACCCATAAGTCTCACCAACAGGAT  850

seq1  TCCCTAATCATAACCTGATTTCTGAAGTGGCAGAGTGACCTAGCAAATCA  898
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCCTAATCATAACCTGATTTCTG-AGTGGCAGAGTGACCTAGCAAATCA  899

seq1  CATCTAATGACAAGAGAGTGACTGTAATTAAAATCCATCCCAGGGCAAAA  948
      |  |   ||||||||||||||||||||||||||||||||||||||| |||
seq2  C--CCTGTGACAAGAGAGTGACTGTAATTAAAATCCATCCCAGGGC-AAA  946

seq1  GCTAATAACTGACAAATGAAG-AGAAAGCATTAAAGTTATGTTAAAAGGT  997
      ||| ||||||||||||||||| |||||||  | |||||||||||||||| 
seq2  GCT-ATAACTGACAAATGAAGAAGAAAGC--TTAAGTTATGTTAAAAGGG  993

seq1  GAATTAATAGCCTAGAATGCAGTAATAACACTCTAATGACTAAATTTATC  1047
      || ||| ||||||| |  |||||||||||||||| |||||||||||||| 
seq2  GATTTATTAGCCTAAATGGCAGTAATAACACTCT-ATGACTAAATTTAT-  1041

seq1  TGACAGTGCTTCAAATTCTGAAGTCAATCATCTTTAAATCAAG  1090
      |||||| |||||| |||||| |||||||||||||| |||||||
seq2  TGACAGGGCTTCATATTCTGGAGTCAATCATCTTT-AATCAAG  1083

seq1: chr14_96290139_96291204
seq2: B6Ng01-170O05.g_68_1128 (reverse)

seq1  GTTCAGTGAATAAACATACTTGCTGGCAAGAAAGCCTGACAACCTGAGTT  50
      |||||| | |||||||| ||||| |||||||||||   |||||||  || 
seq2  GTTCAG-GGATAAACATCCTTGC-GGCAAGAAAGCTGAACAACCTAGGTG  48

seq1  GGATGCCCTGAATGCA-TATCACGGAAGAGGAGAGCAGAGGACCTCAAAG  99
      ||||| |||||||||| |||||| ||| ||||| ||| ||||||||||||
seq2  GGATG-CCTGAATGCATTATCAC-GAAAAGGAGGGCAAAGGACCTCAAAG  96

seq1  TTTCCACTTGCTTTCATATACACACCACAGAATTGTATGCTTTCACCCCG  149
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  TTTCCAC-TGCTTTCATATACACACCACAGAATTGTATCCTTTCACCCCG  145

seq1  CTAATAAGTTTAATGAAAGAAAATTATACAAAAGGAAAGAAAAAGAAATC  199
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAATAAGTTTAATGAAAGAAAATTATACAAAA-GAAAGAAAAAGAAATC  194

seq1  AAATGATATTGTTTTAGTATTTATCTCGGGAAAATTCTGACCACCATGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATATTGTTTTAGTATTTATCTCGGGAAAATTCTGACCACCATGAT  244

seq1  CTGAAAGATGGTTTTTAATATATTTCACAGAAGCTAGAAAACAGCCTAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGATGGTTTTTAATATATTTCACAGAAGCTAGAAAACAGCCTAAA  294

seq1  TTAGAAAAACCCTTTTTCTGGATTATCTAAATGTCATTCTTCAGGGGAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAACCCTTTTTCTGGATTATCTAAATGTCATTCTTCAGGGGAGC  344

seq1  TGACAATTATTTACTAAATAGCTTGACACTCTGTCACTTTACGGAATCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTATTTACTAAATAGCTTGACACTCTGTCACTTTACGGAATCAG  394

seq1  CATTTAGTCTACTTATGGATTCTATTTTTCCTAAATTAGACACATATGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGTCTACTTATGGATTCTATTTTTCCTAAATTAGACACATATGAT  444

seq1  GTTGATGGTATATTTAGAAATTAAGTTAAATGCCACAATTTTCAGAATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGGTATATTTAGAAATTAAGTTAAATGCCACAATTTTCAGAATCA  494

seq1  TAAATTAATGACGATATTTTTTCTATCTTTATCTCTCTATCTCTTCATGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATGACGATATTTTTTCTATCTTTATCTCTCTATCTCTTCATGC  544

seq1  TTACGCATTACAGCCCTGGGAATGGACCCAGAGTCCGCACACGCCCACAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCATTACAGCCCTGGGAATGGACCCAGAGTCCGCACACGCCCACAA  594

seq1  AGCTCTGTGTCATTGGACTACATTTCCAGATTCTGTGTTTTCAACTGTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTGTCATTGGACTACATTTCCAGATTCTGTGTTTTCAACTGTTA  644

seq1  AAATTCCTACTTTGCTTGCCAGGGACAGATTAAAATGCAGCCTCGTATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTACTTTGCTTGCCAGGGACAGATTAAAATGCAGCCTCGTATAT  694

seq1  GGTAAAATATAGAGTTCAGAATGAGTTCCACATGAGAATGTGACTATTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATATAGAGTTCAGAATGAGTTCCACATGAGAATGTGACTATTTC  744

seq1  TACTAAAATTTATTAATTGGTGTTCTTTAATACATGGGGCATAATGATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAATTTATTAATTGGTGTTCTTTAATACATGGGGCATAATGATTA  794

seq1  AACAGTCTCTTAATTATCCACTAGCTTATTTTTGTGAGACACAGTGAAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTCTTAATTATCCACTAGCTTATTTTTGTGAGACACAGTGAAGT  844

seq1  TAACCTACCTGCCAATATTACCATCTGTAAACACATAACTTTATATGCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTACCTGCCAATATTACCATCTGTAAACACATAACTTTATATGCAT  894

seq1  AAAGCCATTTTAAGGTTGTTGTAACAAATTAAGAAAAAGGAAACAATAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATTTTAAGGTTGTTGTAACAAATTAAGAAAAAGGAAACAATAAT  944

seq1  TTGGAAATAATAAGATTTGAGTAATCTGTTTTTCTTTTGACATTTTTTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATAATAAGATTTGAGTAATCTGTTTTTCTTTTGACATTTTTTTC  994

seq1  CAGACAGAGTGTATGTAGCCCTGGTTAGGTTCAAATGGTTTATATAATTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAGTGTATGTAGCCCTGGTTAGGTTCAAATGGTTTATATAATTG  1044

seq1  AGCATATCGTTGAATTC  1066
      |||||||||||||||||
seq2  AGCATATCGTTGAATTC  1061