BAC Information

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BAC

Clone NameB6Ng01-170P08
Chromosome14 (Build37)
Map Location 63,256,701 - 63,416,163
singlet/doubletdoublet
Overlap geneE130113E03Rik, Ints6
Upstream geneLOC668253, Dleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059
Downstream geneLOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9, Xkr6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170P08.bB6Ng01-170P08.g
ACCDH961543DH961544
length1,1331,134
definitionDH961543|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P08, 5' end.DH961544|Mus musculus domesticus DNA, BAC clone: B6Ng01-170P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,415,027 - 63,416,163)(63,256,701 - 63,257,850)
sequence
gaattcatagtgatactgaagaaggcatcctttctgtggcagtagaggcc
tgtacttttgaggagaaaaaaactgaggagaagatctaagtagtagaaga
aagctgtgggaaggaagaaaatgggagccaccaacacgaaggtttgatcg
gcatcaggttactttactagctcagactaagagctataacatgagcttca
cctacgtccctggtcaggcgttgctcattcaccagtgttacttataatgg
ctcaagagacaggcctggaaaatacagttgtcagataaggttcttgtctg
agaaaaatatgtggtctggctaacaacatctaagaggcaggagctgggtt
tgtatctatcctcccgatttcccagacagggaaagaaaggcacgacatta
ggtttcaaaaccacagtccgttctgaatttggaagcagagctggcctcct
ggcattggatatggactttcttaggctggtaatacctaacctgctagatt
atggtcagggttaaaggcgacagcagatgggaaagccctattcagcccat
ttcccctccctccctctaatgatatttccattcatgtattggaggggcca
tggcctgcacatggaggtcagaggacaacctgcctgagtcagttctctca
gtcatatagatctctaagaggaatcacaagtggtctgactaagtgacggg
tgccttacccactctacctgctcagtcattctgttagccccgccccctac
ccagttctttatgatggataattagtattgctaggaaaaaaaaaaacagg
attcattttaatcagtaacacttgcaagatgggaagacgatgtaagaaca
ttcaagacaaggggaacagattctgtaaaattttgttgtggggacagtgg
tggacttgttctgggaatgtgaaataaaggtggtttggggagtcatggtg
gcaaaagccttaatcccagcctgaatccagcaggtgatctcctatgagtt
taagcagcatggtctacttagtgagtcagaaccagtctagattgcatagc
agattttgtctcaagacaaccaaacaaccagtggtatttgggactgggaa
ggccggctcatggttggaaagtacactgttctt
gaattccttaggaatcctacattgcatctcactcctgttaggagctctaa
aaatgtactacactgagctgctttgccttgaaaacgttacaggagaagca
gatgcacacatttccatgacatgagaaagttagggagcctgggaccgcta
ccacatttccatttaaacagtgtggcagtttctgggagggatttgagctc
tggaggactacacttgacaaatccataaattcaggcttgctacttcagct
gttggcagctattaaattttcattctgtcctgtgtgcctccagttgccag
agcaccgtctccagatgaattccctgggcatccgggttcatttgtttagg
tcattgctgatttaaggaaagtgagtggggctgaagcagcttttcacagc
tgtgagtcacagctgtggctccctggggtgccgaaataacagtgctgtgt
gctaatccaatctgtgcgtttcctggggctgtcattactgcaaaatgagg
taaactcggtggcttaaatgctctaaggaagctgtagtgcatgcagctgg
aaatgaggcaaaagcatctcgagacagtaatgatgagttacgatcagaaa
ggaagacatcctcagcagccgaaggagtgtatcataatcactgtggatgc
taccacaaacagactgtatacgcgtgtatactgtgtgctcatattcatat
atgcatagataaaatataatacatgctacagccactaaagacataccaca
cacacactcatacactcacactgcatatatgtatacaaaatacatgctct
tgtcataatatttactctctagatacaaatatgtgtacctttagtcccta
catatactaataaaaattctatacatatacatgtattcatatgtatatac
agactataaaataattaaacgaccattaacatatcttctcctgaaattcg
cagtctatcaccaaatgatacttcatactcaagtgtcacaatgggcccac
atcaagttcagccagactttttcctgatagcctatcatcatgattagaac
aggttcttatgacacatcaatggacaaatccagggaacactcattggggg
tgaatttaaaagctctctttgaaatagcaagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63415027_63416163
seq2: B6Ng01-170P08.b_49_1181 (reverse)

seq1  AAGAACAGTATGCTCTCTCAACCACTGAGCCGG-CTCTCCAGTCCC-AAT  48
      ||||||||| | || || |||||| |||||||| ||  |||||||| |||
seq2  AAGAACAGTGTACTTTC-CAACCA-TGAGCCGGCCTTCCCAGTCCCAAAT  48

seq1  ACCACTTTGTTTGTTTGTTTGCTCTTGAGACAAGATCTTGCTATGCATCC  98
      |||||  || ||||||| ||| ||||||||||| ||| |||||||||  |
seq2  ACCAC--TGGTTGTTTGGTTG-TCTTGAGACAAAATC-TGCTATGCAATC  94

seq1  TAGACTGG-TCTGGAACTCACTAAGTAGACCATGCTGCCTTAAACTCATA  147
      |||||||| ||||  |||||||||||||||||||||| ||||||||||||
seq2  TAGACTGGTTCTG--ACTCACTAAGTAGACCATGCTG-CTTAAACTCATA  141

seq1  GGAGATCACCTGCTGGATTCAAGGCTGGGATTAAGGCTTTTGCCACCATG  197
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGAGATCACCTGCTGGATTC-AGGCTGGGATTAAGGCTTTTGCCACCATG  190

seq1  ACT-CCCAAACCACC-TTATTTCACATTCCCAGAACAAGTCCACCACTGT  245
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTCCCCAAACCACCTTTATTTCACATTCCCAGAACAAGTCCACCACTGT  240

seq1  -CCCACAAC-AAATTTTACAGAATCTGTTCCCCTTGTCTTGAATGTTCTT  293
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAACAAAATTTTACAGAATCTGTTCCCCTTGTCTTGAATGTTCTT  290

seq1  ACATCGTCTTCCTCATCTTGCAAGTGTTACTGATTAAAATGAATCCTGTT  343
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACATCGTCTTCC-CATCTTGCAAGTGTTACTGATTAAAATGAATCCTGTT  339

seq1  TTTTTTTTTCCTAGCAATACTAATTATCCATCATAAAGAACTGGGTAGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCCTAGCAATACTAATTATCCATCATAAAGAACTGGGTAGGG  389

seq1  GGCGGGGCTAACAGAATGACTGAGCAGGTAGAGTGGGTAAGGCACCCGTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCTAACAGAATGACTGAGCAGGTAGAGTGGGTAAGGCACCCGTC  439

seq1  ACTTAGTCAGACCACTTGTGATTCCTCTTAGAGATCTATATGACTGAGAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTCAGACCACTTGTGATTCCTCTTAGAGATCTATATGACTGAGAG  489

seq1  AACTGACTCAGGCAGGTTGTCCTCTGACCTCCATGTGCAGGCCATGGCCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTCAGGCAGGTTGTCCTCTGACCTCCATGTGCAGGCCATGGCCC  539

seq1  CTCCAATACATGAATGGAAATATCATTAGAGGGAGGGAGGGGAAATGGGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATACATGAATGGAAATATCATTAGAGGGAGGGAGGGGAAATGGGC  589

seq1  TGAATAGGGCTTTCCCATCTGCTGTCGCCTTTAACCCTGACCATAATCTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGGCTTTCCCATCTGCTGTCGCCTTTAACCCTGACCATAATCTA  639

seq1  GCAGGTTAGGTATTACCAGCCTAAGAAAGTCCATATCCAATGCCAGGAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTAGGTATTACCAGCCTAAGAAAGTCCATATCCAATGCCAGGAGG  689

seq1  CCAGCTCTGCTTCCAAATTCAGAACGGACTGTGGTTTTGAAACCTAATGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTGCTTCCAAATTCAGAACGGACTGTGGTTTTGAAACCTAATGT  739

seq1  CGTGCCTTTCTTTCCCTGTCTGGGAAATCGGGAGGATAGATACAAACCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCCTTTCTTTCCCTGTCTGGGAAATCGGGAGGATAGATACAAACCCA  789

seq1  GCTCCTGCCTCTTAGATGTTGTTAGCCAGACCACATATTTTTCTCAGACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGCCTCTTAGATGTTGTTAGCCAGACCACATATTTTTCTCAGACA  839

seq1  AGAACCTTATCTGACAACTGTATTTTCCAGGCCTGTCTCTTGAGCCATTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTATCTGACAACTGTATTTTCCAGGCCTGTCTCTTGAGCCATTA  889

seq1  TAAGTAACACTGGTGAATGAGCAACGCCTGACCAGGGACGTAGGTGAAGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAACACTGGTGAATGAGCAACGCCTGACCAGGGACGTAGGTGAAGC  939

seq1  TCATGTTATAGCTCTTAGTCTGAGCTAGTAAAGTAACCTGATGCCGATCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTATAGCTCTTAGTCTGAGCTAGTAAAGTAACCTGATGCCGATCA  989

seq1  AACCTTCGTGTTGGTGGCTCCCATTTTCTTCCTTCCCACAGCTTTCTTCT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCGTGTTGGTGGCTCCCATTTTCTTCCTTCCCACAGCTTTCTTCT  1039

seq1  ACTACTTAGATCTTCTCCTCAGTTTTTTTCTCCTCAAAAGTACAGGCCTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTAGATCTTCTCCTCAGTTTTTTTCTCCTCAAAAGTACAGGCCTC  1089

seq1  TACTGCCACAGAAAGGATGCCTTCTTCAGTATCACTATGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCACAGAAAGGATGCCTTCTTCAGTATCACTATGAATTC  1133

seq1: chr14_63256701_63257850
seq2: B6Ng01-170P08.g_71_1204

seq1  GAATTCCTTAGGAATCCTACATTGCATCTCACTCCTGTTAGGAGCTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGGAATCCTACATTGCATCTCACTCCTGTTAGGAGCTCTAA  50

seq1  AAATGTACTACACTGAGCTGCTTTGCCTTGAAAACGTTACAGGAGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACTACACTGAGCTGCTTTGCCTTGAAAACGTTACAGGAGAAGCA  100

seq1  GATGCACACATTTCCATGACATGAGAAAGTTAGGGAGCCTGGGACCGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACACATTTCCATGACATGAGAAAGTTAGGGAGCCTGGGACCGCTA  150

seq1  CCACATTTCCATTTAAACAGTGTGGCAGTTTCTGGGAGGGATTTGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTCCATTTAAACAGTGTGGCAGTTTCTGGGAGGGATTTGAGCTC  200

seq1  TGGAGGACTACACTTGACAAATCCATAAATTCAGGCTTGCTACTTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGACTACACTTGACAAATCCATAAATTCAGGCTTGCTACTTCAGCT  250

seq1  GTTGGCAGCTATTAAATTTTCATTCTGTCCTGTGTGCCTCCAGTTGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAGCTATTAAATTTTCATTCTGTCCTGTGTGCCTCCAGTTGCCAG  300

seq1  AGCACCGTCTCCAGATGAATTCCCTGGGCATCCGGGTTCATTTGTTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCGTCTCCAGATGAATTCCCTGGGCATCCGGGTTCATTTGTTTAGG  350

seq1  TCATTGCTGATTTAAGGAAAGTGAGTGGGGCTGAAGCAGCTTTTCACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTGATTTAAGGAAAGTGAGTGGGGCTGAAGCAGCTTTTCACAGC  400

seq1  TGTGAGTCACAGCTGTGGCTCCCTGGGGTGCCGAAATAACAGTGCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCACAGCTGTGGCTCCCTGGGGTGCCGAAATAACAGTGCTGTGT  450

seq1  GCTAATCCAATCTGTGCGTTTCCTGGGGCTGTCATTACTGCAAAATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCCAATCTGTGCGTTTCCTGGGGCTGTCATTACTGCAAAATGAGG  500

seq1  TAAACTCGGTGGCTTAAATGCTCTAAGGAAGCTGTAGTGCATGCAGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCGGTGGCTTAAATGCTCTAAGGAAGCTGTAGTGCATGCAGCTGG  550

seq1  AAATGAGGCAAAAGCATCTCGAGACAGTAATGATGAGTTACGATCAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGCAAAAGCATCTCGAGACAGTAATGATGAGTTACGATCAGAAA  600

seq1  GGAAGACATCCCCAGCAGCCGAAGGAGTGTATCATAATCACTGTGGATGC  650
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACATCCTCAGCAGCCGAAGGAGTGTATCATAATCACTGTGGATGC  650

seq1  TACCACAAACAGACTGTATACGCGTGTATACTGTGTGCTCATATTCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAAACAGACTGTATACGCGTGTATACTGTGTGCTCATATTCATAT  700

seq1  ATGCATAGATAAAATATAATACATGCTACAGCCACTAAAGACATACCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGATAAAATATAATACATGCTACAGCCACTAAAGACATACCACA  750

seq1  CACACACTCATACACTCACACTGCATATATGTATACAAAATACATGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCATACACTCACACTGCATATATGTATACAAAATACATGCTCT  800

seq1  TGTCATAATATTTACTCTCTAGATACAAATATGTGTACC-TTAGTCCCTA  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTCATAATATTTACTCTCTAGATACAAATATGTGTACCTTTAGTCCCTA  850

seq1  CATATACTAATAAAAATTCTATACATATACATGTATTCATATGTATATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTAATAAAAATTCTATACATATACATGTATTCATATGTATATAC  900

seq1  AGACTAT-AAATAATTAATACGACCATTAACATATCTCCTCCCTGATATT  948
      ||||||| |||||||||| |||||||||||||||||| || ||||| |||
seq2  AGACTATAAAATAATTAA-ACGACCATTAACATATCTTCT-CCTGAAATT  948

seq1  CCGCAGTCTATCACCAAATGATACTTCAGTACCTCAAGTGTCACAATGGG  998
       ||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  -CGCAGTCTATCACCAAATGATACTTCA-TA-CTCAAGTGTCACAATGGG  995

seq1  CCCACATCAAGTTCATGCACAGACCTTTTTCTTGATAGCCTACCCAACAG  1048
      ||||||||||||||| || |||| ||||||| ||||||||||  || || 
seq2  CCCACATCAAGTTCA-GC-CAGA-CTTTTTCCTGATAGCCTA-TCATCA-  1040

seq1  TGATGAGAAACAGGTTCTTATGACACCATCAAATGTGACAAATCACAGTG  1098
      |||| || ||||||||||||||||| |||| |||| |||||||| ||| |
seq2  TGATTAG-AACAGGTTCTTATGACA-CATC-AATG-GACAAATC-CAGGG  1085

seq1  -ACACTCATTGTGGGTGTATTTATAACAAGCTCTCTTTGATATAGCAATG  1147
       |||||||||| ||||| ||||   | ||||||||||||| ||||||| |
seq2  AACACTCATTGGGGGTGAATTT---AAAAGCTCTCTTTGAAATAGCAA-G  1131

seq1  TGT  1150
      |||
seq2  TGT  1134