BAC Information

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BAC

Clone NameB6Ng01-171J03
Chromosome14 (Build37)
Map Location 99,244,431 - 99,245,551
singlet/doubletsinglet
Overlap genenone
Upstream geneDach1, LOC635593, LOC619716
Downstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171J03.bB6Ng01-171J03.g
ACCGA000418GA000419
length1,1131,153
definitionB6Ng01-171J03.b B6Ng01-171J03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggaagattaagtcaatgaaattgctatattatactttgatttt
ggttttacagatcatgaaattatatttgcaaattttatgcaaatttacta
agagattaatgttgtcatgttctgtagacctaggacaaagaaaatgctgt
taacatcattggttaaaaaatgtacaaagagattccaaggtcacaggttc
tgtacctagagtggttagatggtttcatattctttctccttattctcctt
ctcttcctccatttttcttctcttttaaaaagaagtctataaacaagatc
ccggtgacagtatcttctcagagatgagggaagaaaggcatcgcaaaagg
tgagatggtggaagtgacagttctccctcctggtggagagtccaggaccc
aaatgggaaggcagcactcagccttccatcataccctctgccaggcagtt
ttacgcttgttttgtagccacatttctcactctttgctggatatacatgc
cttaaaaggcttacaactgatataagagcaggcaacgtttgcacatttac
taacacagaggtaagtaggttgtcactgccacatttattccttatcatta
tggttattattgtatgcctatgtgagtgtggatgcatgtgtgccaagggg
ttcgtatagaaatcagaaggcagtgtttagggtgtatcattgaataaaac
aagacacatttttctcttgtggaaattacattattgtaggtagactgaaa
caattcaacattttcaattttagattatataagatgatagaaggcagtgg
ctatgtactatacaccacagaaagtatcagtgtagcatttggaggaagga
cactcttttaaaggaaatcatcaggaaaggtctagatgacattttaacaa
acattaggatgtcataatgacagccatgtctgggaaaagtgtcccaggca
gagaaaagagacacacaattgtcctaaggtgaatgtgtggatctggggag
ccttatcaaagaatagagtcagagagatgacagtgaccaaacatgctagt
tctctatgcggttgtaaatgtttagcttattcctctggtcagagagcaca
agaatattttaac

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctggtagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccagggtttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcaccccctgagtttgatta
ttttcctgccgtctactcctcttgggtgattttgcttccttttttttcta
gggcttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttc
ttctgagcacttcagcgctatgagttccctcttagaatgctttcattggg
tcccatagttggtacgttgtgcttcattcataaacttgaaagtcttaatt
ctttctatcgtctgaacaggtatcatggaaaagagtttcaggttcactgg
taagtagccttccaaatctacgtatgtatgagatacacgtctctagtcag
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99244431_99245551
seq2: B6Ng01-171J03.b_30_1142 (reverse)

seq1  GTTAAAAATTATCTTGTGCCTCTTCCTGA-CAGAGGAAT-AGCTAAACAT  48
      ||| |||||  ||||||| ||||  |||| ||||||||| ||||||||| 
seq2  GTT-AAAATATTCTTGTG-CTCT--CTGACCAGAGGAATAAGCTAAACA-  45

seq1  TTTACAACGGCCATAGAGACTTAGCATGTTTGGGTCACCTGTCATCTCTC  98
      |||||||| | ||||||||  |||||||||| ||||| ||||||||||||
seq2  TTTACAACCG-CATAGAGAACTAGCATGTTT-GGTCA-CTGTCATCTCTC  92

seq1  TGACCTCTA-TCTTTGATTAAGCTCCCCAGATCCACACATCCACCTTAGG  147
      ||| ||||| |||||||| | ||||||||||||||||||| |||||||||
seq2  TGA-CTCTATTCTTTGATAAGGCTCCCCAGATCCACACATTCACCTTAGG  141

seq1  ACAATTGTGTTGTCTCTTTTCTCTGCCTGGGACACTTTTCCCAGACATGG  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGTG-TGTCTCTTTTCTCTGCCTGGGACACTTTTCCCAGACATGG  190

seq1  CTGTCATTTATGACATCCTAATGTTTGTTAAAATGTCATCTAGACCTTCC  247
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGTCA-TTATGACATCCTAATGTTTGTTAAAATGTCATCTAGACCTTTC  239

seq1  CTGATGATTTCCCTTAAAAGAGTGTCCTTCCTCCAAATGCTACACTGATA  297
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTTCCTTTAAAAGAGTGTCCTTCCTCCAAATGCTACACTGATA  289

seq1  CTTTCTGTGGTGTATAGTACATAGCCACTGCCTTCTATCATCTTATATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTGGTGTATAGTACATAGCCACTGCCTTCTATCATCTTATATAA  339

seq1  TCTAAAATTGAAAATGTTGAATTGTTTCAGTCTACCTACAATAATGTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATTGAAAATGTTGAATTGTTTCAGTCTACCTACAATAATGTAAT  389

seq1  TTCCACAAGAGAAAAATGTGTCTTGTTTTATTCAATGATACACCCTAAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAAGAGAAAAATGTGTCTTGTTTTATTCAATGATACACCCTAAAC  439

seq1  ACTGCCTTCTGATTTCTATACGAACCCCTTGGCACACATGCATCCACACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTTCTGATTTCTATACGAACCCCTTGGCACACATGCATCCACACT  489

seq1  CACATAGGCATACAATAATAACCATAATGATAAGGAATAAATGTGGCAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGGCATACAATAATAACCATAATGATAAGGAATAAATGTGGCAGT  539

seq1  GACAACCTACTTACCTCTGTGTTAGTAAATGTGCAAACGTTGCCTGCTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCTACTTACCTCTGTGTTAGTAAATGTGCAAACGTTGCCTGCTCT  589

seq1  TATATCAGTTGTAAGCCTTTTAAGGCATGTATATCCAGCAAAGAGTGAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGTTGTAAGCCTTTTAAGGCATGTATATCCAGCAAAGAGTGAGA  639

seq1  AATGTGGCTACAAAACAAGCGTAAAACTGCCTGGCAGAGGGTATGATGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCTACAAAACAAGCGTAAAACTGCCTGGCAGAGGGTATGATGGA  689

seq1  AGGCTGAGTGCTGCCTTCCCATTTGGGTCCTGGACTCTCCACCAGGAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGTGCTGCCTTCCCATTTGGGTCCTGGACTCTCCACCAGGAGGG  739

seq1  AGAACTGTCACTTCCACCATCTCACCTTTTGCGATGCCTTTCTTCCCTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTCACTTCCACCATCTCACCTTTTGCGATGCCTTTCTTCCCTCA  789

seq1  TCTCTGAGAAGATACTGTCACCGGGATCTTGTTTATAGACTTCTTTTTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGAAGATACTGTCACCGGGATCTTGTTTATAGACTTCTTTTTAA  839

seq1  AAGAGAAGAAAAATGGAGGAAGAGAAGGAGAATAAGGAGAAAGAATATGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAAAAATGGAGGAAGAGAAGGAGAATAAGGAGAAAGAATATGA  889

seq1  AACCATCTAACCACTCTAGGTACAGAACCTGTGACCTTGGAATCTCTTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCTAACCACTCTAGGTACAGAACCTGTGACCTTGGAATCTCTTTG  939

seq1  TACATTTTTTAACCAATGATGTTAACAGCATTTTCTTTGTCCTAGGTCTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTTAACCAATGATGTTAACAGCATTTTCTTTGTCCTAGGTCTA  989

seq1  CAGAACATGACAACATTAATCTCTTAGTAAATTTGCATAAAATTTGCAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATGACAACATTAATCTCTTAGTAAATTTGCATAAAATTTGCAAA  1039

seq1  TATAATTTCATGATCTGTAAAACCAAAATCAAAGTATAATATAGCAATTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTCATGATCTGTAAAACCAAAATCAAAGTATAATATAGCAATTT  1089

seq1  CATTGACTTAATCTTCCAGAATTC  1121
      ||||||||||||||||||||||||
seq2  CATTGACTTAATCTTCCAGAATTC  1113


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