BAC Information

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BAC

Clone NameB6Ng01-172F05
Chromosome14 (Build37)
Map Location 77,596,193 - 77,597,263
singlet/doubletsinglet
Overlap geneD230005D02Rik
Upstream geneLOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122
Downstream geneLOC100043755, LOC676171, EG629678, Gm1587, Dnajc15, Epsti1, AU021034
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172F05.bB6Ng01-172F05.g
ACCGA000974GA000975
length6931,068
definitionB6Ng01-172F05.b B6Ng01-172F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagatctgtatcccatttttaatcgttttttcgtttgt
ttgtttgatttggtagctagtcttttaagttctttctatatcctggatat
tagccctctatcagatgtataaatctttttccatattccaggctgcatct
ttgtcctaatgagactgtcctttgctgtgcagcttctcagcttcaagagc
ttccatttgttaattgttgacctcagtccttgcactatcagtgttctgtt
caggaagttgtctcctataccagtaagttcaaggctattcccaactctct
catctatctggttcagtgtgtctgcctttatgttgaggtctttggtctat
ttagagttgagttttgtctggtgataagtatggatctatttggattcttc
tgcatgtagctatttagttatgccagcactattcgtcaaagatgctgccc
ttttttccagtgtgtgtttctggcttctttataaaaactcagatacccat
gcatgtggatttatgtctaggtcttcatttcaactctagtgatcaaaatg
tctgtttttgtgccactatcaggatgtttttattactatagttttgtagt
acaacttgatattggggatattgatacttccttcagttcttttattattc
tagattgtttttaactgtcttgtggtttttgtgtgtgtgtgtg

gaattctttctggtaaataccttggcagttaattgggcacccatggccta
gttgttagcacaggcaattaactactactccctaagaggcttgatgacag
cgctagctcccttgagaggagaagggagtgacaggaggggctaagattct
aaatgttccacaagttgaactgggaggttcatctgagagaccggatgtga
atgtgtgtggtggtgtgaatgagactgtctcctgtagtctcaggcatttg
aacctctggtcccaagttggtggtgctgtttaggaaggtttaggtgtagc
tatgctggaagaaggagttgagagtaaaaggcctctgtcacctacttcta
gtttgtcatctgcatctgaagatagagctccaagcttctattcccactgc
cacatctgccacttgctgccctggtagactcttgcctctctggaactata
acccccaaatgaatttctccctctacaaatgccttagctatgatgttttt
gtcacggcaacagaaaggtaactaatacagtgtgtcagaaagaatttcaa
gctgacgtctgggtttttgaggtcggacacactgtaatttcgttctgtct
gggaaagactgtgacatgatctctttggctactggatgagaaacagcttg
gggagaaagaagggagagctaaaaaggtaaccaggaggccacctttgaga
atctcacttgaggaatatgctttaaatgcgatgctgttccttaaaaacaa
aatgaccagcagcaaacaacttactgtagaacagtaagcttcaccacagg
tgtgtggagaagaaaccagagggcaaatggaatgcagtcaccctcccatc
atgctccactggaaggtttaatggaagccagagtctcatgttttttctat
taactcagaaactcttcaggcattcccttggtgctacattttctaatagg
gccattccagggctctcagcgtaatctcaagctctaataaaagcccttga
gaagattgtcaggcacaacccatgagctcatattccatgacacttgtaga
gccccgcagctctagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77596193_77597263
seq2: B6Ng01-172F05.g_65_1132 (reverse)

seq1  ACACTAGAGCTGCGGGGGCTTCTTCCAGTGTCATGGAATATGAGCTCCTT  50
      |||||||||||||||||   ||| | |||||||||||||||||||| | |
seq2  ACACTAGAGCTGCGGGG--CTCTACAAGTGTCATGGAATATGAGCT-CAT  47

seq1  GGGTTGTGCCCTGACCATCTTCTCAAGGGCTTTTA-TAGAGCTTGAGGAT  99
      |||||||| |||||| ||||||||||||||||||| |||||||||||   
seq2  GGGTTGTG-CCTGACAATCTTCTCAAGGGCTTTTATTAGAGCTTGAG--A  94

seq1  TTACGCTTGAGAGCCCCCTGGGATGGGCCTATTAGAAAATGTAGCACCAA  149
      |||||| ||||||  |||||| |||| |||||||||||||||||||||||
seq2  TTACGC-TGAGAG--CCCTGGAATGGCCCTATTAGAAAATGTAGCACCAA  141

seq1  GG--ATGCTTGGAGAGTTTCTGAGTTAATAG-AAAAACATGAGACTCTGG  196
      ||  |||| || ||||||||||||||||||| ||||||||||||||||||
seq2  GGGAATGCCTGAAGAGTTTCTGAGTTAATAGAAAAAACATGAGACTCTGG  191

seq1  CTTCCATTAAACCTTCCAGTGGAGCATGATGGGAGGGTGACTGCATTCCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTAAACCTTCCAGTGGAGCATGATGGGAGGGTGACTGCATTCCA  241

seq1  TTTGCCCTCTGGTTTCTTCTCCACACACCTGTGGTGAAGCTTACTGTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTCTGGTTTCTTCTCCACACACCTGTGGTGAAGCTTACTGTTCT  291

seq1  ACAGTAAGTTGTTTGCTGCTGGTCATTTTGTTTTTAAGGAACAGCATCGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGTTGTTTGCTGCTGGTCATTTTGTTTTTAAGGAACAGCATCGC  341

seq1  ATTT-AAGCATATTCCTCAAGTGAGATTCTC-AAGGTGGCCTCCTGGTTA  394
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTAAAGCATATTCCTCAAGTGAGATTCTCAAAGGTGGCCTCCTGGTTA  391

seq1  CCTTTTTAGCTCTCCCTTCTTTCTCCCCAAGCTGTTTCTCATCCAGTAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTAGCTCTCCCTTCTTTCTCCCCAAGCTGTTTCTCATCCAGTAGC  441

seq1  CAAAGAGATCATGTCACAGTCTTTCCCAGACAGAACGAAATTACAGTGTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGATCATGTCACAGTCTTTCCCAGACAGAACGAAATTACAGTGTG  491

seq1  TCCGACCTCAAAAACCCAGACGTCAGCTTGAAATTCTTTCTGACACACTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACCTCAAAAACCCAGACGTCAGCTTGAAATTCTTTCTGACACACTG  541

seq1  TATTAGTTACCTTTCTGTTGCCGTGACAAAAACATCATAGCTAAGGCATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTACCTTTCTGTTGCCGTGACAAAAACATCATAGCTAAGGCATT  591

seq1  TGTAGAGGGAGAAATTCATTTGGGGGTTATAGTTCCAGAGAGGCAAGAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGGGAGAAATTCATTTGGGGGTTATAGTTCCAGAGAGGCAAGAGT  641

seq1  CTACCAGGGCAGCAAGTGGCAGATGTGGCAGTGGGAATAGAAGCTTGGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGGGCAGCAAGTGGCAGATGTGGCAGTGGGAATAGAAGCTTGGAG  691

seq1  CTCTATCTTCAGATGCAGATGACAAACTAGAAGTAGGTGACAGAGGCCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTTCAGATGCAGATGACAAACTAGAAGTAGGTGACAGAGGCCTT  741

seq1  TTACTCTCAACTCCTTCTTCCAGCATAGCTACACCTAAACCTTCCTAAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTCAACTCCTTCTTCCAGCATAGCTACACCTAAACCTTCCTAAAC  791

seq1  AGCACCACCAACTTGGGACCAGAGGTTCAAATGCCTGAGACTACAGGAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCACCAACTTGGGACCAGAGGTTCAAATGCCTGAGACTACAGGAGA  841

seq1  CAGTCTCATTCACACCACCACACACATTCACATCCGGTCTCTCAGATGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCATTCACACCACCACACACATTCACATCCGGTCTCTCAGATGAA  891

seq1  CCTCCCAGTTCAACTTGTGGAACATTTAGAATCTTAGCCCCTCCTGTCAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGTTCAACTTGTGGAACATTTAGAATCTTAGCCCCTCCTGTCAC  941

seq1  TCCCTTCTCCTCTCAAGGGAGCTAGCGCTGTCATCAAGCCTCTTAGGGAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTCCTCTCAAGGGAGCTAGCGCTGTCATCAAGCCTCTTAGGGAG  991

seq1  TAGTAGTTAATTGCCTGTGCTAACAACTAGGCCATGGGTGCCCAATTAAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTTAATTGCCTGTGCTAACAACTAGGCCATGGGTGCCCAATTAAC  1041

seq1  TGCCAAGGTATTTACCAGAAAGAATTC  1071
      |||||||||||||||||||||||||||
seq2  TGCCAAGGTATTTACCAGAAAGAATTC  1068


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