BAC Information

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BAC

Clone NameB6Ng01-173A05
Chromosome14 (Build37)
Map Location 83,298,167 - 83,440,031
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173A05.bB6Ng01-173A05.g
ACCGA001477GA001478
length1,1271,075
definitionB6Ng01-173A05.b B6Ng01-173A05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,298,167 - 83,299,279)(83,438,969 - 83,440,031)
sequence
gaattcaattgcactctactgcattcactgaactgctgccccccacttct
gactcactctgcactgctgtcttcagtcactattccttcctctcttttgt
tcccatgagagttgggcatattctatctctaactctatcaaatgtttcac
tgagccatccctttgtctgcctctttaaatagccatcactttcaaacaag
gctgcttcttcctacaaactaactttatcttcattatttaggattagagg
tgtgtacaaaggtgtgtctattctagacagaagaattaaaaatgagtcat
tgcagcctggtcttacagcctagaaagtctttggatatgacaccttgcct
gtgtagttatgttgctggattaaaatttctgtacaaaaaagttttctcaa
tttacaaaaagagaagaaatggttaaatatatctgaaaagataactccta
aaggaaataggacagtttttaagaaagcaactaaaagacattcaatgtaa
ttatttattaagaacacaaaactccgtaatgacacaccacttttcataca
ctgatatatgtttaaaaaaagtaaaagaacaagacagatggtgttcaggc
ttggcaacgatagggaggaattgaaactcttatagattgcatatggggat
ggaagatggtgcaaacattttaaaggtttggcagttcttcaaaaatataa
agctgccatatgatccagcaattttgctcctctgtatacatccaagagta
ataaaaacatatgtctacactaaaactttgtataaccatgtttacagcag
aattagacatatccaaaaattagatggaccaaatgactacaagctgatgg
gtttaataaataaaaaggcatgccccaatggcactttcagaaaagttcaa
tgttcctatagttacatgccacaatattggttgaactttttaaaaatatg
cctacttatcatcaaaaaagaaaaacatattgtgtcattttatataatgt
taaaatgttcatggatcacaatggagcaaaaccgatttactatttgcata
tgaatagagattaagaacgtaaatttcgattctatgatggaatttttcta
aattaggagctggcatgaaatgcaact

gaattcacagtgttgtggaaccaagatatttagaaaataacctttttctt
tagaaaataaggtattgggtctgctgtggtattgctactttaaaccctag
ctttatgagactgataaaggaagatcacaagtccaaggctggtctgtgcc
acactgagaccctgttataaaacacaaaaacaaaaccgtagatagtaatt
gaactgacgctgtgactaaccattgaacactactagctctgatgtctgtc
ctgtaattagtacatggtgcagctcctaaacattaaatgatttagcttgc
aatctgacagacagctaattttaataatgtcacagcagccacatttttac
tcttctaaatgttgtttcataacttgttttctaagattgtctattcccaa
tgataatttcaaaatttagtgtcatactccagttaccagattgttcttca
tgacatttttgaagacaattaaacaaaagtgatcagttaggttcgatgtg
attcaaagatgatctataaataaaaattataaattttagaatagtacttt
cttactatttttttctgaaatgaaaatatgtcagtcatatagtaagattt
gactggaagttgcaaagagagaggaccttacagtacataagattaaaggg
acagtatgaaggtcactggaagttgtttaaaggagaaaataatgaataag
ggaatttggtgaaggtactcaaaacaggtttaatatgtaagaatatttta
acctagctgcatgttctctactgagagctgcactatacaaacaggttaag
tataatagtgacatcaatcaccttcagctctcagtgtgtgacaggttcat
aaacaagtttagaagaaaggtaatcaaggaaagtatgcagaaaagcacac
atctgggattcattgtattaaagggtatctagtcaacagaatggcttctg
tttttcagtttttccagtgtaagaaaagaaactgcatggcttgaataatg
aaaactgaaccaccaaattcattggttgaagaggtgggtgtatactggaa
caaagttttttttttttttttcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83298167_83299279
seq2: B6Ng01-173A05.b_45_1171

seq1  GAATTCAATTGCACTCTACTGCATTCACTGAACTGCTGCCCCCCACTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGCACTCTACTGCATTCACTGAACTGCTGCCCCCCACTTCT  50

seq1  GACTCACTCTGCACTGCTGTCTTCAGTCACTATTCCTTCCTCTCTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACTCTGCACTGCTGTCTTCAGTCACTATTCCTTCCTCTCTTTTGT  100

seq1  TCCCATGAGAGTTGGGCATATTCTATCTCTAACTCTATCAAATGTTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGAGAGTTGGGCATATTCTATCTCTAACTCTATCAAATGTTTCAC  150

seq1  TGAGCCATCCCTTTGTCTGCCTCTTTAAATAGCCATCACTTTCAAACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATCCCTTTGTCTGCCTCTTTAAATAGCCATCACTTTCAAACAAG  200

seq1  GCTGCTTCTTCCTACAAACTAACTTTATCTTCATTATTTAGGATTAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTCTTCCTACAAACTAACTTTATCTTCATTATTTAGGATTAGAGG  250

seq1  TGTGTACAAAGGTGTGTCTATTCTAGACAGAAGAATTAAAAATGAGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACAAAGGTGTGTCTATTCTAGACAGAAGAATTAAAAATGAGTCAT  300

seq1  TGCAGCCTGGTCTTACAGCCTAGAAAGTCTTTGGATATGACACCTTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTGGTCTTACAGCCTAGAAAGTCTTTGGATATGACACCTTGCCT  350

seq1  GTGTAGTTATGTTGCTGGATTAAAATTTCTGTACAAAAAAGTTTTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTATGTTGCTGGATTAAAATTTCTGTACAAAAAAGTTTTCTCAA  400

seq1  TTTACAAAAAGAGAAGAAATGGTTAAATATATCTGAAAAGATAACTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAAAGAGAAGAAATGGTTAAATATATCTGAAAAGATAACTCCTA  450

seq1  AAGGAAATAGGACAGTTTTTAAGAAAGCAACTAAAAGACATTCAATGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATAGGACAGTTTTTAAGAAAGCAACTAAAAGACATTCAATGTAA  500

seq1  TTATTTATTAAGAACACAAAACTCCGTAATGACACACCACTTTTCATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTAAGAACACAAAACTCCGTAATGACACACCACTTTTCATACA  550

seq1  CTGATATATGTTTAAAAAAAGTAAAAGAACAAGACAGATGGTGTTCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATATGTTTAAAAAAAGTAAAAGAACAAGACAGATGGTGTTCAGGC  600

seq1  TTGGCAACGATAGGGAGGAATTGAAACTCTTATAGATTGCATATGGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAACGATAGGGAGGAATTGAAACTCTTATAGATTGCATATGGGGAT  650

seq1  GGAAGATGGTGCAAACATTTTAAAGGTTTGGCAGTTCTTCAAAAATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATGGTGCAAACATTTTAAAGGTTTGGCAGTTCTTCAAAAATATAA  700

seq1  AGCTGCCATATGATCCAGCAATTTTGCTCCTCTGTATACATCCAAGAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCATATGATCCAGCAATTTTGCTCCTCTGTATACATCCAAGAGTA  750

seq1  ATAAAAACATATGTCTACACTAAAAC-TTGTATAACCATGTTTACAGCAG  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATAAAAACATATGTCTACACTAAAACTTTGTATAACCATGTTTACAGCAG  800

seq1  AATTAGACATATCCAAAAATTAGATGGACCAAATGACTACAAGCTGAT-G  848
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATTAGACATATCCAAAAATTAGATGGACCAAATGACTACAAGCTGATGG  850

seq1  GTTTAATAAAT-AAAAGGCATGCCCCAAATGGCACTTTCAGAAAAG-TCA  896
      ||||||||||| |||||||||||||| ||||||||||||||||||| |||
seq2  GTTTAATAAATAAAAAGGCATGCCCC-AATGGCACTTTCAGAAAAGTTCA  899

seq1  ATGTTCCTA---GTACATGCCACAATA-TGGTTGAAC-TTTTAAAAATAT  941
      |||||||||    |||||||||||||| ||||||||| ||||||||||||
seq2  ATGTTCCTATAGTTACATGCCACAATATTGGTTGAACTTTTTAAAAATAT  949

seq1  G-CTAC-TATCATCAAAAAAG-AAAACATATTGTGTCATTTTATAT-ATG  987
      | |||| |||||||||||||| |||||||||||||||||||||||| |||
seq2  GCCTACTTATCATCAAAAAAGAAAAACATATTGTGTCATTTTATATAATG  999

seq1  TT-AAATGTTCAT-GATCACAAATGGAGCAAAACAGA-TTACTATTTGCA  1034
      || |||||||||| |||||| ||||||||||||| || ||||||||||||
seq2  TTAAAATGTTCATGGATCAC-AATGGAGCAAAACCGATTTACTATTTGCA  1048

seq1  TATGAATAGAGTATTAAGAA-GTAAAATTCAGATCTATGATGGAATTTTC  1083
      ||||||||||| |||||||| ||||| |||   |||||||||||||||| 
seq2  TATGAATAGAG-ATTAAGAACGTAAATTTCGATTCTATGATGGAATTTTT  1097

seq1  TAAAATTAAGGAGCTTGCATG-AATGCAACT  1113
        ||||| ||||||| ||||| |||||||||
seq2  CTAAATT-AGGAGCTGGCATGAAATGCAACT  1127


seq1: chr14_83438969_83440031
seq2: B6Ng01-173A05.g_67_1141 (reverse)

seq1  CATG-AAAAAAAAAAAAAAACTT--GTCCAGTATACACCACTCTCT---A  44
      |||| ||||||||||||||||||   |||||||||||||   ||||   |
seq2  CATGAAAAAAAAAAAAAAAACTTTGTTCCAGTATACACCCACCTCTTCAA  50

seq1  ACAATGA--TTTGTGTGTCAGTTTTCATTTATCAAG-CATGCAGTTTCTT  91
       ||||||  || |||  ||||||||||||  ||||| |||||||||||||
seq2  CCAATGAATTTGGTGGTTCAGTTTTCATTATTCAAGCCATGCAGTTTCTT  100

seq1  CTCTTACACTGGAAAAACTG-AAAACAG-AGCCA-TCTGTTGACTAGATA  138
       ||||||||||||||||||| ||||||| ||||| |||||||||||||||
seq2  TTCTTACACTGGAAAAACTGAAAAACAGAAGCCATTCTGTTGACTAGATA  150

seq1  CCCTTTAATACAATGAAT-CCAGATGTGTGCTTTTCTGCATACTTTCCTT  187
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCTTTAATACAATGAATCCCAGATGTGTGCTTTTCTGCATACTTTCCTT  200

seq1  GATTACCTTTCTTCTAAACTTTGTTTATGAACCTGTCACACACTGAGAGC  237
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATTACCTTTCTTCTAAAC-TTGTTTATGAACCTGTCACACACTGAGAGC  249

seq1  TGAAGGTGATTGATGTCACTATTATACTTAACCTGTTTGTATAGTGCAGC  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTGATTGATGTCACTATTATACTTAACCTGTTTGTATAGTGCAGC  299

seq1  TCTCAGTAGAGAACATGCAGCTAGGTTAAAATATTCTTACATATTAAACC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAGAGAACATGCAGCTAGGTTAAAATATTCTTACATATTAAACC  349

seq1  TGTTTTGAGTACCTTCACCAAATTCCCTTATTCATTATTTTCTCCTTTAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAGTACCTTCACCAAATTCCCTTATTCATTATTTTCTCCTTTAA  399

seq1  ACAACTTCCAGTGACCTTCATACTGTCCCTTTAATCTTATGTACTGTAAG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTCCAGTGACCTTCATACTGTCCCTTTAATCTTATGTACTGTAAG  449

seq1  GTCCTCTCTCTTTGCAACTTCCAGTCAAATCTTACTATATGACTGACATA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTCTCTTTGCAACTTCCAGTCAAATCTTACTATATGACTGACATA  499

seq1  TTTTCATTTCAGAAAAAAATAGTAAGAAAGTACTATTCTAAAATTTATAA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTCAGAAAAAAATAGTAAGAAAGTACTATTCTAAAATTTATAA  549

seq1  TTTTTATTTATAGATCATCTTTGAATCACATCGAACCTAACTGATCACTT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTATAGATCATCTTTGAATCACATCGAACCTAACTGATCACTT  599

seq1  TTGTTTAATTGTCTTCAAAAATGTCATGAAGAACAATCTGGTAACTGGAG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAATTGTCTTCAAAAATGTCATGAAGAACAATCTGGTAACTGGAG  649

seq1  TATGACACTAAATTTTGAAATTATCATTGGGAATAGACAATCTTAGAAAA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACACTAAATTTTGAAATTATCATTGGGAATAGACAATCTTAGAAAA  699

seq1  CAAGTTATGAAACAACATTTAGAAGAGTAAAAATGTGGCTGCTGTGACAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTATGAAACAACATTTAGAAGAGTAAAAATGTGGCTGCTGTGACAT  749

seq1  TATTAAAATTAGCTGTCTGTCAGATTGCAAGCTAAATCATTTAATGTTTA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTAGCTGTCTGTCAGATTGCAAGCTAAATCATTTAATGTTTA  799

seq1  GGAGCTGCACCATGTACTAATTACAGGACAGACATCAGAGCTAGTAGTGT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCACCATGTACTAATTACAGGACAGACATCAGAGCTAGTAGTGT  849

seq1  TCAATGGTTAGTCACAGCGTCAGTTCAATTACTATCTACGGTTTTGTTTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTTAGTCACAGCGTCAGTTCAATTACTATCTACGGTTTTGTTTT  899

seq1  TGTGTTTTATAACAGGGTCTCAGTGTGGCACAGACCAGCCTTGGACTTGT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTATAACAGGGTCTCAGTGTGGCACAGACCAGCCTTGGACTTGT  949

seq1  GATCTTCCTTTATCAGTCTCATAAAGCTAGGGTTTAAAGTAGCAATACCA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCTTTATCAGTCTCATAAAGCTAGGGTTTAAAGTAGCAATACCA  999

seq1  CAGCAGACCCAATACCTTATTTTCTAAAGAAAAAGGTTATTTTCTAAATA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACCCAATACCTTATTTTCTAAAGAAAAAGGTTATTTTCTAAATA  1049

seq1  TCTTGGTTCCACAACACTGTGAATTC  1063
      ||||||||||||||||||||||||||
seq2  TCTTGGTTCCACAACACTGTGAATTC  1075


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