BAC Information

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BAC

Clone NameB6Ng01-173L13
Chromosome14 (Build37)
Map Location 99,599,681 - 99,727,198
singlet/doubletdoublet
Overlap geneD14Ertd581e, LOC100043395, LOC100043397, Klf5
Upstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3
Downstream geneLOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173L13.bB6Ng01-173L13.g
ACCGA001993GA001994
length1,029118
definitionB6Ng01-173L13.b B6Ng01-173L13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,726,182 - 99,727,198)(99,599,681 - 99,599,798)
sequence
gaattctctctatagagcagcctggcctctggatattgtttttcctagga
gatcctgccaaagagtagcaggttgacacctgacaacgtgggagaagacc
gttaggatccttccttgtttcactcggctgaactgtcttttgtatagcat
gcacacagtatctcacaacggtaaaaaaaaaaaaaaaaagttagcatatg
atgtaaactttctttgagacaggataaattgactagaccaacctaatatt
cctgaagaccccctacctccacctccttaggtgttcccatcacaagtgtg
tgccacaaccctcagctttataattaactgttctctaaaaaggacagact
gaccctggagttcttactactgtggaggatacaaggagatcccaagttcg
atgctagcttgggcgatttagcgagaacctggcttcaattaaaaacaaca
acaataacaacaacaaaaaccacagcaaggggacatacaccataatccaa
gtagccaagaggcagaggccacgggattgccacaggctcaagacccttca
ggactacaaatacaaagcaagtaccaggccagccacggctaaatagcaag
gcaccatctcaaaagaataatagtaacttttaaatgggtcggaggtgtaa
cacttgtctggcttgcctgaggttctgggtacagttcaacctgaaacctc
cagaaaccaccctgcctctgtctctcagccagtgctgggattaaaggtgt
gtgccaccattccgggcttgataactattctagtaatcaaacggaataag
caagcaaaaaaggaataaaatactagcccacgttacagggtcacatactt
gcaaatttcagcattggaacactaaagcaagaagaagggtcaatgtgttc
aagtccagcctaagtctacatcgcaagtattggaccatgcctgctcgcaa
cagtgaaattcttgtctttagaaaaaaatagacctggaatgcattgtaat
ctcttctctatgagctaccaattgtcccg
ataagaggactgggaatacaattcagagacagagcatgttcctaacatta
acaaggccccaagttcagttcctatccaggaaaggcagaagggagggagg
ggaagagagggaggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99726182_99727198
seq2: B6Ng01-173L13.b_45_1073 (reverse)

seq1  CGGGACA--TTGTAGCCTCATAAGGAAGA-ATTACAATGCATTTCA-GTC  46
      |||||||  | |||| ||||||  ||||| ||||||||||||| || |||
seq2  CGGGACAATTGGTAG-CTCATAGAGAAGAGATTACAATGCATTCCAGGTC  49

seq1  TATTTTTTTCT-AAGACAAG-ATTTCACTGTGCCGAACAGGC-TGGTCCA  93
      ||||||||||| |||||||| ||||||||||  ||| ||||| |||||||
seq2  TATTTTTTTCTAAAGACAAGAATTTCACTGTTGCGAGCAGGCATGGTCCA  99

seq1  AGACTTGCGATGTAGAC-TAGGCTGGACTTGAACACA-TGA-CCTTCTTC  140
      | ||||||||||||||| ||||||||||||||||||| ||| ||||||||
seq2  ATACTTGCGATGTAGACTTAGGCTGGACTTGAACACATTGACCCTTCTTC  149

seq1  TTGCTTTAGTGTTCCAATGCTGAAA-TTGCAAGTATGTGACCCTGT-ACG  188
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TTGCTTTAGTGTTCCAATGCTGAAATTTGCAAGTATGTGACCCTGTAACG  199

seq1  T-GGCTAGTATTTTATTCC-TTTTTGCTTGCTTTATTCCGTTTTGATTAC  236
      | ||||||||||||||||| ||||||||||| |||||||| |||||||||
seq2  TGGGCTAGTATTTTATTCCTTTTTTGCTTGC-TTATTCCG-TTTGATTAC  247

seq1  TAG-ATAGTTATCAAGCCCGGAATGGTGGCACACACCTTTAATCCCAGCA  285
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGTTATCAAGCCCGGAATGGTGGCACACACCTTTAATCCCAGCA  297

seq1  CTGGCTGAGAGACAGAGGCAGGGTGGTTTCTGGAGGTTTCAGGTTGAACT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGAGAGACAGAGGCAGGGTGGTTTCTGGAGGTTTCAGGTTGAACT  347

seq1  GTACCCAGAACCTCAGGCAAGCCAGACAAGTGTTACACCTCCGACCCATT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAGAACCTCAGGCAAGCCAGACAAGTGTTACACCTCCGACCCATT  397

seq1  TAAAAGTTACTATTATTCTTTTGAGATGGTGCCTTGCTATTTAGCCGTGG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTACTATTATTCTTTTGAGATGGTGCCTTGCTATTTAGCCGTGG  447

seq1  CTGGCCTGGTACTTGCTTTGTATTTGTAGTCCTGAAGGGTCTTGAGCCTG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGGTACTTGCTTTGTATTTGTAGTCCTGAAGGGTCTTGAGCCTG  497

seq1  TGGCAATCCCGTGGCCTCTGCCTCTTGGCTACTTGGATTATGGTGTATGT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATCCCGTGGCCTCTGCCTCTTGGCTACTTGGATTATGGTGTATGT  547

seq1  CCCCTTGCTGTGGTTTTTGTTGTTGTTATTGTTGTTGTTTTTAATTGAAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGCTGTGGTTTTTGTTGTTGTTATTGTTGTTGTTTTTAATTGAAG  597

seq1  CCAGGTTCTCGCTAAATCGCCCAAGCTAGCATCGAACTTGGGATCTCCTT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCTCGCTAAATCGCCCAAGCTAGCATCGAACTTGGGATCTCCTT  647

seq1  GTATCCTCCACAGTAGTAAGAACTCCAGGGTCAGTCTGTCCTTTTTAGAG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTCCACAGTAGTAAGAACTCCAGGGTCAGTCTGTCCTTTTTAGAG  697

seq1  AACAGTTAATTATAAAGCTGAGGGTTGTGGCACACACTTGTGATGGGAAC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAATTATAAAGCTGAGGGTTGTGGCACACACTTGTGATGGGAAC  747

seq1  ACCTAAGGAGGTGGAGGTAGGGGGTCTTCAGGAATATTAGGTTGGTCTAG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGGAGGTGGAGGTAGGGGGTCTTCAGGAATATTAGGTTGGTCTAG  797

seq1  TCAATTTATCCTGTCTCAAAGAAAGTTTACATCATATGCTAACTTTTTTT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTATCCTGTCTCAAAGAAAGTTTACATCATATGCTAACTTTTTTT  847

seq1  TTTTTTTTTTACCGTTGTGAGATACTGTGTGCATGCTATACAAAAGACAG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTACCGTTGTGAGATACTGTGTGCATGCTATACAAAAGACAG  897

seq1  TTCAGCCGAGTGAAACAAGGAAGGATCCTAACGGTCTTCTCCCACGTTGT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCGAGTGAAACAAGGAAGGATCCTAACGGTCTTCTCCCACGTTGT  947

seq1  CAGGTGTCAACCTGCTACTCTTTGGCAGGATCTCCTAGGAAAAACAATAT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCAACCTGCTACTCTTTGGCAGGATCTCCTAGGAAAAACAATAT  997

seq1  CCAGAGGCCAGGCTGCTCTATAGAGAGAATTC  1017
      ||||||||||||||||||||||||||||||||
seq2  CCAGAGGCCAGGCTGCTCTATAGAGAGAATTC  1029

seq1: chr14_99599681_99599798
seq2: B6Ng01-173L13.g_74_191

seq1  ATAAGAGGACTGGGAATACAATTCAGAGACAGAGCATGTTCCTAACATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGACTGGGAATACAATTCAGAGACAGAGCATGTTCCTAACATTA  50

seq1  ACAAGGCCCCAAGTTCAGTTCCTATCCAGGAAAGGCAGAAGGGAGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCCCAAGTTCAGTTCCTATCCAGGAAAGGCAGAAGGGAGGGAGG  100

seq1  GGAAGAGAGGGAGGGGTG  118
      ||||||||||||||||||
seq2  GGAAGAGAGGGAGGGGTG  118