BAC Information

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BAC

Clone NameB6Ng01-175B02
Chromosome14 (Build37)
Map Location 83,649,124 - 83,766,229
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175B02.bB6Ng01-175B02.g
ACCGA002972GA002973
length1,1511,135
definitionB6Ng01-175B02.b B6Ng01-175B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,649,124 - 83,650,258)(83,765,098 - 83,766,229)
sequence
gaattcatgtagcaagtaatgcagggtacctccaatttaattagtttaac
cacttgagtccttctgaatgagctaagtacatggggttaatcacttatca
gtaggaacatataaggcttatgtgcagatatgaatgcagtcagcaggtga
tagtctgacctatgtgttctgccctgccctctgcacgatgaagccagtga
agcattcaaccattgaatttcttggctgcttaaatgtctcatacaatact
caggtcacattagccttgaggatttattttgttacatttccttaagtgat
tgagtgctattgttgtgggttttgcttatactggttttggcctttaattt
ttttgttggatttctaattgtacttgctttttcattttacatttctccac
aataaataacaaagaataattacttatctagaagaaatttctataagacc
actttatagttattgaattgatatctgttaacaatttcaaatataaaatt
ataaatattaatatttttgaaatattggaaaactagtggactttcaaact
tgtttttacattttactaaaataaattttgcattacctgtcgaattgttt
acatctcttagataattccacagctaggtataagtcattgaataatatcc
aaattctcatattaaaattatccagaataattttcagatagagttaaaac
agaaaaagacactgtggttaatactaaaaataggtatatatttagttaaa
ggaaatcatttttctagaaatgttttccctattttatctaaatatacata
atggataagtttaatacttaacaaacatgaaatcttttatagaaatataa
actcaaaaaaatttgacttttaataaatgagctaactttcacctatagaa
tattttgtcaaagacaaacttgaatataagcaaaggttataagtgttaaa
tctaagtaacctgccgcttagttcctttaaagagaaaagaattttgacct
ttaattaccagaaaggctgttctttcttgaattacatgcagactctttta
ttattcatgattaaggtaaaggacctgtctcattctgaaatttgaataaa
gattcatgttaagaattccaactcagttctagcttctctcctttccagtg
t

gaattcacaaagattttgcatatactcataatttctgcaaatctgtgcac
atatctaattcttggtgttaactctttttttcttttgtagtttattccat
ttgtcatttttagttattgataaagtcaaggacttatgtgaatcaatata
aaatattgtcattgttttattgaatatatgtttgatacttcattgactgt
tccattacatttttacttacttgcaactcattcgtttatattaatgaaca
tatttgatgtttttcttgtctcactaatcaatgacccaagtaatctacat
tcaagctttttcccctatttttattgaaattagagttgttcattccctat
atatattgtaaattcttcatctctgaacattccctatgttccttcataga
ttttttttttttgcagagccaaatttcaaagaaatattttctttttactt
tttcccctgtgatctctgagaagtttcaatccattagtgatgctctgtcc
cttttgtttttctttttcttttttatttttcttttttttttttttttttt
ttttttttttttaactggatatttcctttattcacatttcaaatgttatc
ccctttcctggtttccccctccaagaaagcccctattcatcctccttccc
actgcttctaggagggtgtttcttcaccaacctacccactcccacattct
catcctcaatacccctaagacaaacatttttatgtatccattgacattct
gattaaaaataatttctaatatttttcttttcttttctttttttgacact
tttttattcttagcacttgtagattttttaacatgaatatatacatatat
gtatatatgtgtgtatgtgtgtgtattcttcaaaatacccctctttgccc
tttttccaacttcctagaaactttgaaaagtaaaaatttaaactagtggt
tgacaagtgtccattgcaaaaaaagactacgatggtatgggaaagagcat
cctctatttggataatggtaccttttgtactatagggaaaataatctcca
catgaccctcattcctaccttctgtggttattttcccctttggaaattca
cagtataaaatttcacatacatggtttatctttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83649124_83650258
seq2: B6Ng01-175B02.b_47_1197

seq1  GAATTCATGTAGCAAGTAATGCAGGGTACCTCCAATTTAATTAGTTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAGCAAGTAATGCAGGGTACCTCCAATTTAATTAGTTTAAC  50

seq1  CACTTGAGTCCTTCTGAATGAGCTAAGTACATGGGGTTAATCACTTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAGTCCTTCTGAATGAGCTAAGTACATGGGGTTAATCACTTATCA  100

seq1  GTAGGAACATATAAGGCTTATGTGCAGATATGAATGCAGTCAGCAGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAACATATAAGGCTTATGTGCAGATATGAATGCAGTCAGCAGGTGA  150

seq1  TAGTCTGACCTATGTGTTCTGCCCTGCCCTCTGCACGATGAAGCCAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGACCTATGTGTTCTGCCCTGCCCTCTGCACGATGAAGCCAGTGA  200

seq1  AGCATTCAACCATTGAATTTCTTGGCTGCTTAAATGTCTCATACAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCAACCATTGAATTTCTTGGCTGCTTAAATGTCTCATACAATACT  250

seq1  CAGGTCACATTAGCCTTGAGGATTTATTTTGTTACATTTCCTTAAGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCACATTAGCCTTGAGGATTTATTTTGTTACATTTCCTTAAGTGAT  300

seq1  TGAGTGCTATTGTTGTGGGTTTTGCTTATACTGGTTTTGGCCTTTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTATTGTTGTGGGTTTTGCTTATACTGGTTTTGGCCTTTAATTT  350

seq1  TTTTGTTGGATTTCTAATTGTACTTGCTTTTTCATTTTACATTTCTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGGATTTCTAATTGTACTTGCTTTTTCATTTTACATTTCTCCAC  400

seq1  AATAAATAACAAAGAATAATTACTTATCTAGAAGAAATTTCTATAAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAACAAAGAATAATTACTTATCTAGAAGAAATTTCTATAAGACC  450

seq1  ACTTTATAGTTATTGAATTGATATCTGTTAACAATTTCAAATATAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAGTTATTGAATTGATATCTGTTAACAATTTCAAATATAAAATT  500

seq1  ATAAATATTAATATTTTTGAAATATTGGAAAACTAGTGGACTTTCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTAATATTTTTGAAATATTGGAAAACTAGTGGACTTTCAAACT  550

seq1  TGTTTTTACATTTTACTAAAATAAATTTTGCATTACCTGTCGAATTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTACATTTTACTAAAATAAATTTTGCATTACCTGTCGAATTGTTT  600

seq1  ACATCTCTTAGATAATTCCACAGCTAGGTATAAGTCATTGAATAATATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCTTAGATAATTCCACAGCTAGGTATAAGTCATTGAATAATATCC  650

seq1  AAATTCTCATATTAAAATTATCCAGAATAATTTTCAGATAGAGTTAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCATATTAAAATTATCCAGAATAATTTTCAGATAGAGTTAAAAC  700

seq1  AGAAAAAGACACTGTGGTTAATACTAAAAATAGGTATATATTTAGTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGACACTGTGGTTAATACTAAAAATAGGTATATATTTAGTTAAA  750

seq1  GGAAATCATTTTTCTAGAAATGTTTTCCCTATTTTATCTAAATATACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCATTTTTCTAGAAATGTTTTCCCTATTTTATCTAAATATACATA  800

seq1  ATGGATAAGTTTAATACTTAACAAACATGAAATC-TTTATAGAAATATAA  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGGATAAGTTTAATACTTAACAAACATGAAATCTTTTATAGAAATATAA  850

seq1  ACTCAAAAAAATTTGACTTTTAATAAATGAGCTAACTTTCACCTATAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAAAAATTTGACTTTTAATAAATGAGCTAACTTTCACCTATAGAA  900

seq1  TATTTTGTCAAAGACAAACTTGAATATAAGCAAAGGTTATAAGTGTTAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTCAAAGACAAACTTGAATATAAGCAAAGGTTATAAGTGTTAAA  950

seq1  TCTAAGTAACCTGCCGCTTAGTTCC-TTAAAGAG-AAAGAATTTTGACC-  996
      ||||||||||||||||||||||||| |||||||| |||||||||||||| 
seq2  TCTAAGTAACCTGCCGCTTAGTTCCTTTAAAGAGAAAAGAATTTTGACCT  1000

seq1  TTAATTACCAGAAAGGCTG-TCTTTCTTGAA-TACATTGCAGACTCTTTT  1044
      ||||||||||||||||||| ||||||||||| |||| |||||||||||||
seq2  TTAATTACCAGAAAGGCTGTTCTTTCTTGAATTACA-TGCAGACTCTTTT  1049

seq1  ATTATTCATGATTAA-GTAAAGGA-CTGTCTCA-TCTGAAATT--GATAA  1089
      ||||||||||||||| |||||||| |||||||| |||||||||   ||||
seq2  ATTATTCATGATTAAGGTAAAGGACCTGTCTCATTCTGAAATTTGAATAA  1099

seq1  AGATTCA-GGTAAGAATCCCAACTCAG-TCTAGC-TCTCTC---TTCAGT  1133
      ||||||| | ||||||| ||||||||| |||||| ||||||   | ||||
seq2  AGATTCATGTTAAGAATTCCAACTCAGTTCTAGCTTCTCTCCTTTCCAGT  1149

seq1  GT  1135
      ||
seq2  GT  1151


seq1: chr14_83765098_83766229
seq2: B6Ng01-175B02.g_64_1198 (reverse)

seq1  GTAAAGATAAACAAATGTATTTTGTAATATTTTTATACT-TGTATTTCCA  49
      ||||||||||||  |||||   ||| | | ||||||||| || |||||||
seq2  GTAAAGATAAAC-CATGTA---TGTGA-AATTTTATACTGTGAATTTCCA  45

seq1  AAGGGGGAAAAATACACAGAA-GTAGGATTGGAGGTCATGTGTAGATTAT  98
      |||||| ||| |  ||||||| |||||| ||  ||||||||| |||||||
seq2  AAGGGGAAAATAACCACAGAAGGTAGGAATGAGGGTCATGTGGAGATTAT  95

seq1  TTACACTATAGTACAAAAGTTA-CATTATTCCAAATAGTAGGATGCTCTT  147
      || | |||||||||||||| || ||||| ||||||||| |||||||||||
seq2  TTTCCCTATAGTACAAAAGGTACCATTA-TCCAAATAG-AGGATGCTCTT  143

seq1  TCCCATACCATCTATGTCTTTTTTTGCAATGGACACTTTGTCAA-CACTA  196
      ||||||||||||   ||||||||||||||||||||| ||||||| |||||
seq2  TCCCATACCATCGTAGTCTTTTTTTGCAATGGACAC-TTGTCAACCACTA  192

seq1  GTTTTAAATTTTTACTTTTCAAAGTTTCTAGGATGTTGGAACAAGGGCAA  246
      | ||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  G-TTTAAATTTTTACTTTTCAAAGTTTCTAGGAAGTTGGAAAAAGGGCAA  241

seq1  AGA-GTGTA-TATGAAGAATACACACACATACACACATATATACATATAT  294
      ||| | ||| | ||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGTATTTTGAAGAATACACACACATACACACATATATACATATAT  291

seq1  GTATATATTCATGTT-AAAAATCTAC-AGTGCTAAGAAT-AAAAAGTGTC  341
      ||||||||||||||| |||||||||| |||||||||||| ||||||||||
seq2  GTATATATTCATGTTAAAAAATCTACAAGTGCTAAGAATAAAAAAGTGTC  341

seq1  -AAAAAAGAAAAGAAAAGAAAAATATTAGAAATTA-TTTTAATCAGAATG  389
       |||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAAAAAGAAAAGAAAAGAAAAATATTAGAAATTATTTTTAATCAGAATG  391

seq1  TCAATGGATACAT-AAAATGTTTGTCTTAGGGGTATTGAGGATGAGAATG  438
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAATGGATACATAAAAATGTTTGTCTTAGGGGTATTGAGGATGAGAATG  441

seq1  TGGGAGTGGGTAGGTTGGTGAAGAAACACCCTCCTAGAAGCAGTGGGAAG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTGGGTAGGTTGGTGAAGAAACACCCTCCTAGAAGCAGTGGGAAG  491

seq1  GAGGATGAATAGGGGCTTTCTTGGAGGGGGAAACCAGGAAAGGGGATAAC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGAATAGGGGCTTTCTTGGAGGGGGAAACCAGGAAAGGGGATAAC  541

seq1  ATTTGAAATGTGAATAAAGGAAATATCCAGTAAAAAAAAAAAAAAAAAAA  588
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTGAAATGTGAATAAAGGAAATATCCAGTTAAAAAAAAAAAAAAAAAA  591

seq1  AAAAAAAAAAAAAGAAAAATAAAAAAGAAAAAGAAAAACAAAAGGGACAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAAAAATAAAAAAGAAAAAGAAAAACAAAAGGGACAG  641

seq1  AGCATCACTAATGGATTGAAACTTCTCAGAGATCACAGGGGAAAAAGTAA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACTAATGGATTGAAACTTCTCAGAGATCACAGGGGAAAAAGTAA  691

seq1  AAAGAAAATATTTCTTTGAAATTTGGCTCTGCAAAAAAAAAAAATCTATG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATATTTCTTTGAAATTTGGCTCTGCAAAAAAAAAAAATCTATG  741

seq1  AAGGAACATAGGGAATGTTCAGAGATGAAGAATTTACAATATATATAGGG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACATAGGGAATGTTCAGAGATGAAGAATTTACAATATATATAGGG  791

seq1  AATGAACAACTCTAATTTCAATAAAAATAGGGGAAAAAGCTTGAATGTAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACAACTCTAATTTCAATAAAAATAGGGGAAAAAGCTTGAATGTAG  841

seq1  ATTACTTGGGTCATTGATTAGTGAGACAAGAAAAACATCAAATATGTTCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTGGGTCATTGATTAGTGAGACAAGAAAAACATCAAATATGTTCA  891

seq1  TTAATATAAACGAATGAGTTGCAAGTAAGTAAAAATGTAATGGAACAGTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAAACGAATGAGTTGCAAGTAAGTAAAAATGTAATGGAACAGTC  941

seq1  AATGAAGTATCAAACATATATTCAATAAAACAATGACAATATTTTATATT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTATCAAACATATATTCAATAAAACAATGACAATATTTTATATT  991

seq1  GATTCACATAAGTCCTTGACTTTATCAATAACTAAAAATGACAAATGGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACATAAGTCCTTGACTTTATCAATAACTAAAAATGACAAATGGAA  1041

seq1  TAAACTACAAAAGAAAAAAAGAGTTAACACCAAGAATTAGATATGTGCAC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTACAAAAGAAAAAAAGAGTTAACACCAAGAATTAGATATGTGCAC  1091

seq1  AGATTTGCAGAAATTATGAGTATATGCAAAATCTTTGTGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGCAGAAATTATGAGTATATGCAAAATCTTTGTGAATTC  1135


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