BAC Information

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BAC

Clone NameB6Ng01-176C19
Chromosome14 (Build37)
Map Location 70,313,739 - 70,531,957
singlet/doubletdoublet
Overlap gene1700081D17Rik, LOC668397, Egr3, Bin3
Upstream geneLOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701
Downstream gene2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176C19.bB6Ng01-176C19.g
ACCGA003781GA003782
length876732
definitionB6Ng01-176C19.b B6Ng01-176C19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,313,739 - 70,314,611)(70,531,229 - 70,531,957)
sequence
ggaattcttaaccaatgtcttctttcctcctcccatgacaacctaaaatt
caattccaccccagtccacctgcagagcatgcgtgaggggttatttgcag
gagcttggtcgacctcaaagcagccacactgttaaagtcttcaaccagca
tgaatggtggcttctcctcggtcacataagagagagccttcttgagttag
ctttctctaacttaaatactctcggacctccacaaccagagccgagtgta
attagggaaaaattgcacccacacggcaaggaagattggctcagggttgg
gctcccatacccacccatctgcttttaggcaggagtgaccagtatgctcc
tgacagtctcctgcaaatggactcagctgatctgattgagacgtggatgt
tttgcttggaggttcttcagggaaagatgaggtcaggcaggctcagatcc
tggtttcattacccacctttggaacccttggtttttccatctgtatattg
ggtatgcactagagtccatggggaacataaggtggcagatacctctttaa
gcacttagcccatagccagccttagaataaatgttaacttggccatgcta
tctgtaagcaacggtgcagagaagacttccgaactagacgactcagtggg
cagaaagaaagatttattggggatcaaacatccaaggcccatctctaggg
gtggtggtggtggaggcaggacagagaagagtaagtcaaaaaaggcaggc
agcagagaggggatctgaaactgatagcctgtgggactgatgtgcccttg
ccttaggtagcggatgtgaggggaaaggttaaaggaggttcctggagggt
taagggtatttcttggtaaatagaaa
gaattcctgttcattttcttattttcaacgtctcaggcgtggacaggtct
tgccaggtacctgatatcaggatcccctctccatggggtctagctagggt
tggggtgctgatgtggaaggttaggactggtagaggctggtcctctgtgt
ctggactttccccaggttcctgctgccctcccggacaaggatgacacatg
ggcccagctctccttaaagagcaaagcttgcagtttttaactgtcttctt
caaaggcgcatggtgaaaaagtccaatcctctgcgagtctcaggtgtccc
ttgagaagtagtggtaagaggtgggcgtcctctgctccctggccctgctc
aaatcatacatcctcatactccatgcccacttagttcacctagctctgct
cttaggtaccaactctaccacaccaaggaatcagcttggcttgctttcta
cagaggaaatggacacaggccagcgtgggtggctgggacactcctgctca
atatggcagcacgcacacctgacccaccttcccgagttccaagtctctaa
gtgcttagatctgattcccactgatttccagagatgggaggtggacctag
gtctacatcagggttttcagggcccccaacctaggaggcacccatttctt
gactggcataggattgaacacgaagctcactccccagggagataaagcgt
ggggtgaagagagagtggggaggggaaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70313739_70314611
seq2: B6Ng01-176C19.b_44_918

seq1  GAATTCTTAACCAATGTCTTCTTTCCTCCTCCCATGACAACCTAAAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACCAATGTCTTCTTTCCTCCTCCCATGACAACCTAAAATTC  50

seq1  AATTCCACCCCAGTCCACCTGCAGAGCATGCGTGAGGGGTTATTTGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACCCCAGTCCACCTGCAGAGCATGCGTGAGGGGTTATTTGCAGG  100

seq1  AGCTTGGTCGACCTCAAAGCAGCCACACTGTTAAAGTCTTCAACCAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGTCGACCTCAAAGCAGCCACACTGTTAAAGTCTTCAACCAGCAT  150

seq1  GAATGGTGGCTTCTCCTCGGTCACATAAGAGAGAGCCTTCTTGAGTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTGGCTTCTCCTCGGTCACATAAGAGAGAGCCTTCTTGAGTTAGC  200

seq1  TTTCTCTAACTTAAATACTCTCGGACCTCCACAACCAGAGCCGAGTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAACTTAAATACTCTCGGACCTCCACAACCAGAGCCGAGTGTAA  250

seq1  TTAGGGAAAAATTGCACCCACACGGCAAGGAAGATTGGCTCAGGGTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAAAAATTGCACCCACACGGCAAGGAAGATTGGCTCAGGGTTGGG  300

seq1  CTCCCATACCCACCCATCTGCTTTTAGGCAGGAGTGACCAGTATGCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATACCCACCCATCTGCTTTTAGGCAGGAGTGACCAGTATGCTCCT  350

seq1  GACAGTCTCCTGCAAATGGACTCAGCTGATCTGATTGAGACGTGGATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCTCCTGCAAATGGACTCAGCTGATCTGATTGAGACGTGGATGTT  400

seq1  TTGCTTGGAGGTTCTTCAGGGAAAGATGAGGTCAGGCAGGCTCAGATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGGAGGTTCTTCAGGGAAAGATGAGGTCAGGCAGGCTCAGATCCT  450

seq1  GGTTTCATTACCCACCTTTGGAACCCTTGGTTTTTCCATCTGTATATTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCATTACCCACCTTTGGAACCCTTGGTTTTTCCATCTGTATATTGG  500

seq1  GTATGCACTAGAGTCCATGGGGAACATAAGGTGGCAGATACCTCTTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCACTAGAGTCCATGGGGAACATAAGGTGGCAGATACCTCTTTAAG  550

seq1  CACTTAGCCCATAGCCAGCCTTAGAATAAATGTTAACTTGGCCATGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGCCCATAGCCAGCCTTAGAATAAATGTTAACTTGGCCATGCTAT  600

seq1  CTGTAAGCAACGGTGCAGAGAAGACTTCCGAACTAGACGACTCAGTGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCAACGGTGCAGAGAAGACTTCCGAACTAGACGACTCAGTGGGC  650

seq1  AGAAAGAAAGATTTATTGGGGATCAAACATCCAAGG-CCATCTCTAGGGG  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGAAAGAAAGATTTATTGGGGATCAAACATCCAAGGCCCATCTCTAGGGG  700

seq1  TGGTGGTGGTGGAGGCAGGACAGAGAAGAGTAAGTCAAAAAAGGCAGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTGGTGGAGGCAGGACAGAGAAGAGTAAGTCAAAAAAGGCAGGCA  750

seq1  GCAGAGAGGGGATCTG-AACTGATAGCCTGTGGGACTGATGTGCCCTTGC  798
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCAGAGAGGGGATCTGAAACTGATAGCCTGTGGGACTGATGTGCCCTTGC  800

seq1  CTTAGGTAGCGGATGTGAGGGGAAAGGTTAAAGGAGGTTCCTGGAGGGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTAGCGGATGTGAGGGGAAAGGTTAAAGGAGGTTCCTGGAGGGTT  850

seq1  AAGGGTAGTTCCTGGTAAACAGAAA  873
      ||||||| ||| ||||||| |||||
seq2  AAGGGTATTTCTTGGTAAATAGAAA  875

seq1: chr14_70531229_70531957
seq2: B6Ng01-176C19.g_63_793 (reverse)

seq1  TCTTT--CCCTCCCCACTCTCTCTTCACCCCACGCTTTATCTCCCTGGGG  48
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCCCTCCCCACTCTCTCTTCACCCCACGCTTTATCTCCCTGGGG  50

seq1  AGTGAGCTTCGTGTTCAATCCTATGCCAGTCAAGAAATGGGTGCCTCCTA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTTCGTGTTCAATCCTATGCCAGTCAAGAAATGGGTGCCTCCTA  100

seq1  GGTTGGGGGCCCTGAAAACCCTGATGTAGACCTAGGTCCACCTCCCATCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGGGCCCTGAAAACCCTGATGTAGACCTAGGTCCACCTCCCATCT  150

seq1  CTGGAAATCAGTGGGAATCAGATCTAAGCACTTAGAGACTTGGAACTCGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATCAGTGGGAATCAGATCTAAGCACTTAGAGACTTGGAACTCGG  200

seq1  GAAGGTGGGTCAGGTGTGCGTGCTGCCATATTGAGCAGGAGTGTCCCAGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGGGTCAGGTGTGCGTGCTGCCATATTGAGCAGGAGTGTCCCAGC  250

seq1  CACCCACGCTGGCCTGTGTCCATTTCCTCTGTAGAAAGCAAGCCAAGCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACGCTGGCCTGTGTCCATTTCCTCTGTAGAAAGCAAGCCAAGCTG  300

seq1  ATTCCTTGGTGTGGTAGAGTTGGTACCTAAGAGCAGAGCTAGGTGAACTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGGTGTGGTAGAGTTGGTACCTAAGAGCAGAGCTAGGTGAACTA  350

seq1  AGTGGGCATGGAGTATGAGGATGTATGATTTGAGCAGGGCCAGGGAGCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCATGGAGTATGAGGATGTATGATTTGAGCAGGGCCAGGGAGCAG  400

seq1  AGGACGCCCACCTCTTACCACTACTTCTCAAGGGACACCTGAGACTCGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGCCCACCTCTTACCACTACTTCTCAAGGGACACCTGAGACTCGCA  450

seq1  GAGGATTGGACTTTTTCACCATGCGCCTTTGAAGAAGACAGTTAAAAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTGGACTTTTTCACCATGCGCCTTTGAAGAAGACAGTTAAAAACT  500

seq1  GCAAGCTTTGCTCTTTAAGGAGAGCTGGGCCCATGTGTCATCCTTGTCCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTTGCTCTTTAAGGAGAGCTGGGCCCATGTGTCATCCTTGTCCG  550

seq1  GGAGGGCAGCAGGAACCTGGGGAAAGTCCAGACACAGAGGACCAGCCTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCAGCAGGAACCTGGGGAAAGTCCAGACACAGAGGACCAGCCTCT  600

seq1  ACCAGTCCTAACCTTCCACATCAGCACCCCAACCCTAGCTAGACCCCATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCCTAACCTTCCACATCAGCACCCCAACCCTAGCTAGACCCCATG  650

seq1  GAGAGGGGATCCTGATATCAGGTACCTGGCAAGACCTGTCCACGCCTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGATCCTGATATCAGGTACCTGGCAAGACCTGTCCACGCCTGAG  700

seq1  ACGTTGAAAATAAGAAAATGAACAGGAATTC  729
      |||||||||||||||||||||||||||||||
seq2  ACGTTGAAAATAAGAAAATGAACAGGAATTC  731