BAC Information

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BAC

Clone NameB6Ng01-176G06
Chromosome14 (Build37)
Map Location 98,928,476 - 99,036,479
singlet/doubletdoublet
Overlap geneLOC635593
Upstream geneEG668659, Dach1
Downstream geneLOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176G06.bB6Ng01-176G06.g
ACCGA003935GA003936
length1,1651,054
definitionB6Ng01-176G06.b B6Ng01-176G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,035,317 - 99,036,479)(98,928,476 - 98,929,548)
sequence
gaattctctgagaaagggagcaatgtctgcagattttttttaaatgtcac
attagctctttccccttgtcacagtcacagggcctgcatgtagttacttg
tgcagaaacgcagggttcttagaaggatgctttctctggtttttcactta
gcagctccaatgattatcaggaaataaatcaaccgtcagcagtcataggc
agctattaaatctgagatttcagcatcttaattggtgtgttaaaagttaa
agagccaaagtcatgttagatacataaagctgtttatatgcatcaacttt
actgcaatatcccgtggttaagaaaacatcacgctgcttgatttggaaaa
aataaagaaattaagataaaagtcttagatgttatgcagggcaattgtcc
agctgattacagaaaattcaccacatatctactttgtaagcatacaaaga
gattctggttttgagacaaggtaactacacattgaagccatccttttaat
ttctcctaccttggaatttagagttagtcctttaagcacatcacaattac
tctcaacacacgttatttttctttaagaaatttggggaacaaataattta
ttcttcaaatcccatcttggaatttactccttgagaccactttgacaaaa
ccctgtaagtacagaattccctatgttttctttacttcttttctaaaccc
gtaactgttgaggccaagtaatgcaaacgtgagctttgcaaggaagtgaa
ttgtcagggatgagatagaggcaatgcattcgaagcatggtcagctttgg
gcaatgtaatctctaaattccaaagtgtcctttaaaatacattataatgt
tgtttttctacttgtgtggtaccagtagcatcaccaagccatattcttac
cacctgcccactggatacgagattagctgtacttaggtctaataacaata
tttctatatctccatgtccttttagatatttattaaccaaagaaagagat
tattactttaaatactactcctgtgtattgaatacctccatgcatgtgaa
tgttgtcagaaccttatatttggtgcatattatttcgacttattaaaatt
acacaatttattttttataacttgataatcattccaggcgaatttttttt
tttggggggggtgaa

gaattctatttggaagaggggaaaaatttaaaactatgcaatcttcatta
ttattttgatgttacaaattgcaaaatcagttgtattcctttttgtagtt
cgaattcccaaaacaattctctgatgttgagataacctatcatttggcct
ttcctacacaattgtcatttctgatctaaaagcagctgaaccttatccat
aagtgtaccctttctaattacagagagagagagagagagagagagagaga
gagagagagagagaggaaaaaagaaaaaaagtaataatcgtatggtccat
ccttgaaaagtattgagttcattttgtttagtagtttgcaatatccttta
tgtctgtgatggttagttttattgtctacttgttgtaaattagaatcacc
cgatttccctaattgatatgggaagacctattccaaatatgggtgcaacc
ttctggtagcaacccagcacaaagggcgtggtagaaaggacattatttac
ctccagctgatgtggccttccttcttgctgctgagttggttgacactaat
gttgctgttgacattgatatcagaaacagagtttccaggtggctcttgct
gtgtaaggatgactctctccaggaacctctcttggtgtttgggttatccg
atggaggcttttgaggtcttcagcctcatggattcagcaatgggctgttc
acagactccttggagtgaagcagccattatgaagctattcctgctactga
ggtagttacccaacctctgggaccctgtaactcctaagttctcagcacct
ctctggttgagacaacacttgttactatttctatgtaagctctttaataa
ttttaaaatttacatgttatatatataatttgaccacatctttttctcta
cataaacttgactatgacatgttcccttttatttcccttttatttctctt
tttttaagtttatacacatattaaccctactatatatctatataatagta
tcaagttttataaatgagagataaactaatataatactattttttatgac
tgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99035317_99036479
seq2: B6Ng01-176G06.b_33_1197 (reverse)

seq1  TTCACCCCCCC--AAAAAAAAAATCTGCCTAGAAATTGATTTATC-AGTT  47
      |||||||||||  |||||||||||  |||| |||  ||| ||||| ||||
seq2  TTCACCCCCCCCAAAAAAAAAAATTCGCCTGGAA--TGA-TTATCAAGTT  47

seq1  TTATAAAAATATATTTTTGTGTATTTTTAATAATTTAAAAATAATATTGC  97
       || ||||||| |   ||||||| |||||||||  |  |||||||| |||
seq2  ATA-AAAAATAAA---TTGTGTAATTTTAATAA-GTCGAAATAATA-TGC  91

seq1  A-CAAATATAAGGTTCTGACAACATTCAACAT-CATGGA-GTATTCAATA  144
      | ||||||||||||||||||||||||| |||| |||||| ||||||||||
seq2  ACCAAATATAAGGTTCTGACAACATTC-ACATGCATGGAGGTATTCAATA  140

seq1  CACAGGAGTAGTATTTAAAGTAATAATCTC-TTCTTTGTTTA--TAATAT  191
      |||||||||||||||||||||||||||||| ||||||| |||   |||||
seq2  CACAGGAGTAGTATTTAAAGTAATAATCTCTTTCTTTGGTTAATAAATAT  190

seq1  CTAAAAGGACATGGAGATATAGAAATATTGTTATTAGACCTAAGTACAGC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGGACATGGAGATATAGAAATATTGTTATTAGACCTAAGTACAGC  240

seq1  T-ATCTCGTATCCAGTGGGCAGGTGGTAAG-ATATGGCTTGGTGATGCTA  289
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAATCTCGTATCCAGTGGGCAGGTGGTAAGAATATGGCTTGGTGATGCTA  290

seq1  CTGGTACCACACAAGTAG-AAAACAACATTATAATGTATTTTAAAGGACA  338
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGGTACCACACAAGTAGAAAAACAACATTATAATGTATTTTAAAGGACA  340

seq1  CTTTGGAATTTAGAGATTACATTGCCCAAAGCTGACCATGCTTCGAATGC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAATTTAGAGATTACATTGCCCAAAGCTGACCATGCTTCGAATGC  390

seq1  ATTGCCTCTATCTCATCCCTGACAATTCACTTCCTTGCAAAGCTCACGTT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTCTATCTCATCCCTGACAATTCACTTCCTTGCAAAGCTCACGTT  440

seq1  TGCATTACTTGGCCTCAACAGTTACGGGTTTAGAAAAGAAGTAAAGAAAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTACTTGGCCTCAACAGTTACGGGTTTAGAAAAGAAGTAAAGAAAA  490

seq1  CATAGGGAATTCTGTACTTACAGGGTTTTGTCAAAGTGGTCTCAAGGAGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGAATTCTGTACTTACAGGGTTTTGTCAAAGTGGTCTCAAGGAGT  540

seq1  AAATTCCAAGATGGGATTTGAAGAATAAATTATTTGTTCCCCAAATTTCT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAAGATGGGATTTGAAGAATAAATTATTTGTTCCCCAAATTTCT  590

seq1  TAAAGAAAAATAACGTGTGTTGAGAGTAATTGTGATGTGCTTAAAGGACT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAATAACGTGTGTTGAGAGTAATTGTGATGTGCTTAAAGGACT  640

seq1  AACTCTAAATTCCAAGGTAGGAGAAATTAAAAGGATGGCTTCAATGTGTA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAAATTCCAAGGTAGGAGAAATTAAAAGGATGGCTTCAATGTGTA  690

seq1  GTTACCTTGTCTCAAAACCAGAATCTCTTTGTATGCTTACAAAGTAGATA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTTGTCTCAAAACCAGAATCTCTTTGTATGCTTACAAAGTAGATA  740

seq1  TGTGGTGAATTTTCTGTAATCAGCTGGACAATTGCCCTGCATAACATCTA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGAATTTTCTGTAATCAGCTGGACAATTGCCCTGCATAACATCTA  790

seq1  AGACTTTTATCTTAATTTCTTTATTTTTTCCAAATCAAGCAGCGTGATGT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTATCTTAATTTCTTTATTTTTTCCAAATCAAGCAGCGTGATGT  840

seq1  TTTCTTAACCACGGGATATTGCAGTAAAGTTGATGCATATAAACAGCTTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAACCACGGGATATTGCAGTAAAGTTGATGCATATAAACAGCTTT  890

seq1  ATGTATCTAACATGACTTTGGCTCTTTAACTTTTAACACACCAATTAAGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTAACATGACTTTGGCTCTTTAACTTTTAACACACCAATTAAGA  940

seq1  TGCTGAAATCTCAGATTTAATAGCTGCCTATGACTGCTGACGGTTGATTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAATCTCAGATTTAATAGCTGCCTATGACTGCTGACGGTTGATTT  990

seq1  ATTTCCTGATAATCATTGGAGCTGCTAAGTGAAAAACCAGAGAAAGCATC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGATAATCATTGGAGCTGCTAAGTGAAAAACCAGAGAAAGCATC  1040

seq1  CTTCTAAGAACCCTGCGTTTCTGCACAAGTAACTACATGCAGGCCCTGTG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAGAACCCTGCGTTTCTGCACAAGTAACTACATGCAGGCCCTGTG  1090

seq1  ACTGTGACAAGGGGAAAGAGCTAATGTGACATTTAAAAAAAATCTGCAGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGACAAGGGGAAAGAGCTAATGTGACATTTAAAAAAAATCTGCAGA  1140

seq1  CATTGCTCCCTTTCTCAGAGAATTC  1163
      |||||||||||||||||||||||||
seq2  CATTGCTCCCTTTCTCAGAGAATTC  1165


seq1: chr14_98928476_98929548
seq2: B6Ng01-176G06.g_64_1117

seq1  GAATTCTATTTGGAAGAGGGGAAAAATTTAAAACTATGCAATCTTCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTGGAAGAGGGGAAAAATTTAAAACTATGCAATCTTCATTA  50

seq1  TTATTTTGATGTTACAAATTGCAAAATCAGTTGTATTCCTTTTTGTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGATGTTACAAATTGCAAAATCAGTTGTATTCCTTTTTGTAGTT  100

seq1  CGAATTCCCAAAACAATTCTCTGATGTTGAGATAACCTATCATTTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTCCCAAAACAATTCTCTGATGTTGAGATAACCTATCATTTGGCCT  150

seq1  TTCCTACACAATTGTCATTTCTGATCTAAAAGCAGCTGAACCTTATCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACACAATTGTCATTTCTGATCTAAAAGCAGCTGAACCTTATCCAT  200

seq1  AAGTGTACCCTTTCTAATTACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTACCCTTTCTAATTACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250

seq1  GAGAGAGAGAGAGAGGAAAAAAGAAAAAAAGTAATAATCGTATGGTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGGAAAAAAGAAAAAAAGTAATAATCGTATGGTCCAT  300

seq1  CCTTGAAAAGTATTGAGTTCATTTTGTTTAGTAGTTTGCAATATCCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAAAGTATTGAGTTCATTTTGTTTAGTAGTTTGCAATATCCTTTA  350

seq1  TGTCTGTGATGGTTAGTTTTATTGTCTACTTGTTGTAAATTAGAATCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGATGGTTAGTTTTATTGTCTACTTGTTGTAAATTAGAATCACC  400

seq1  CGATTTCCCTAATTGATATGGGAAGACCTATTCCAAATATGGGTGCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTCCCTAATTGATATGGGAAGACCTATTCCAAATATGGGTGCAACC  450

seq1  TTCTGGTAGCAACCCAGCACAAAGGGCGTGGTAGAAAGGACATTATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTAGCAACCCAGCACAAAGGGCGTGGTAGAAAGGACATTATTTAC  500

seq1  CTCCAGCTGATGTGGCCTTCCTTCTTGCTGCTGAGTTGGTTGACACTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTGATGTGGCCTTCCTTCTTGCTGCTGAGTTGGTTGACACTAAT  550

seq1  GTTGCTGTTGACATTGATATCAGAAACAGAGTTTCCAGGTGGCTCTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTTGACATTGATATCAGAAACAGAGTTTCCAGGTGGCTCTTGCT  600

seq1  GTGTAAGGATGACTCTCTCCAGGAACCTCTCTTGGTGTTTGGGTTATCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGGATGACTCTCTCCAGGAACCTCTCTTGGTGTTTGGGTTATCCG  650

seq1  ATGGAGGCTTTTGAGGTCTTCAGCCTCATGGATTCAGCAATGGGCTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCTTTTGAGGTCTTCAGCCTCATGGATTCAGCAATGGGCTGTTC  700

seq1  ACAGACTCCTTGGAGTGAAGCAGCCATTATGAAGCTATTCCTGCTACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTCCTTGGAGTGAAGCAGCCATTATGAAGCTATTCCTGCTACTGA  750

seq1  GGTAGTTACCCAACCTCTGGGACCCTGTAACTCCTAAGTTCTCAGCACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTACCCAACCTCTGGGACCCTGTAACTCCTAAGTTCTCAGCACCT  800

seq1  CTCTGGTTGAGACAACACTTGTTACTATTTCTATGTAAGCTCTTTAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTGAGACAACACTTGTTACTATTTCTATGTAAGCTCTTTAATAA  850

seq1  TTTTAAAATTTACATGTTATATATATAATTTGACCACATCTTTTTCTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTTACATGTTATATATATAATTTGACCACATCTTTTTCTCTA  900

seq1  CATAAACTTGACTATGACATGTTCCCTTTTATTTCCCTTTTATTTCTTCT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATAAACTTGACTATGACATGTTCCCTTTTATTTCCCTTTTATTTC-TCT  949

seq1  TTTTTTAAGTTTAATACAACATATTTAACCCTACTATTAATATCTATATT  1000
      |||||||||||| |||| ||||| |||||||||||||  ||||||||| |
seq2  TTTTTTAAGTTT-ATAC-ACATA-TTAACCCTACTAT--ATATCTATA-T  993

seq1  AATAGTATTCAAGTTTTTTAATAAATGGAGGAGA-ATAAACTAATTAATA  1049
      ||||||| |||||||||   ||||||    |||| ||||||||||  || 
seq2  AATAGTA-TCAAGTTTT---ATAAAT----GAGAGATAAACTAAT--AT-  1032

seq1  AATACTTAATTTTTTATGACTGTT  1073
      ||||||  ||||||||||||||||
seq2  AATACT--ATTTTTTATGACTGTT  1054


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