BAC Information

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BAC

Clone NameB6Ng01-179K24
Chromosome14 (Build37)
Map Location 50,169,842 - 50,256,712
singlet/doubletdoublet
Overlap genenone
Upstream gene4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream gene3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179K24.bB6Ng01-179K24.g
ACCGA006337GA006338
length1,1611,101
definitionB6Ng01-179K24.b B6Ng01-179K24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,169,842 - 50,170,991)(50,255,637 - 50,256,712)
sequence
gaattctccgtaccagtttccacagcagctgtacctgtttgcaatcccac
caacagtgaataatgtttccccctttactccatcttctccagcatttgtt
gtaggttgttcccttgatctttgtcattctgactgaataagatgaaatct
caaggttggtttgatttgaatttccactatatattttaaagaatttaaaa
aaatatgtgtatgttctgcattcatggatatatgtgcatcatatgtatgt
ctggtgcctaagaaggccagaaggcatcgagtcttctggaattggactta
cagatggttttaagtgctacatggaagctgggaaattatctcaggtcctc
cacaagagtagccaatgctcttaatatctaagctctctctctagcaccca
ttcttagattgcacagccccaccatgtttcaaaatgtggacagtgagctg
gtgagatggcttagatagtgaaggtgcctgcagttaagcctgacgattcc
tgccacggacatggtgaaaagagggaactgagtttccaaagttgtcctgg
aatttccacagatattcacacacatacacatattcacactcatgagtaca
tgtacacaaaataagtcaacaaaaatgtaatgatttggaaaagataaaac
atgcagctcaatagctagcaattttaaaactaagtggttttgaagttata
taagttgtatagtgacattaatctttttatatgaaacgaaataataagac
attattttaagagctgacatttgccaaatatgttcagagtgttcttagga
gactgttgttctgattgtctggaggcttcatagggagtgattacctttaa
acttttttttttttgtattttcaaagttcaacacccatcattcccaggtc
tagaaaactcaaattttttgtacaagtgtccaaacgaatttctttgggaa
aaagaactcatgctaaacccaactcagttagggtcactgtgtcccagtta
atcagggattgctacgggattacatccataatggaaagccaaggacacag
gtagaggagcaactggtacactgtacattgtttctcttcctttacagatc
caataaatagtgaggataattaagccggattggctaattggatcctagaa
tcaaagaaagc
gaattccagttgtgcaaacttaagcaagtggatcaaaacactgagtcctt
tatttagttatttcctcaaaaggatttgtaagctacctttcctatgctgg
gaattgggtagttcaggtctccactttcaaagaacttacaactgaacaga
aactcgacctggtcagtaagtgtcagaaggttagaacaccattaagggtg
tctacatggacactgggaacagaaacaggaagagctgaactgccttctgt
ggtgagggagggctgaagcttgaagaaggaaaaagatggaaataatcaaa
agactaggtagaaacattcaagatggaatgagaaacatggaccatggtcc
tggggcagggagcactaagactgactgaatacaaaggccaacagaacaag
ttgggaatggaggctgggatggtagggaactgataataatgagaactaaa
ggcataacagcaatcgtacactctcataccaaagccctaaaaggttttaa
gaagttcaaagcaaagcaaagcagttttcttgttttcgggtaatggaaaa
tgctgatataaagagctattctagaatggagctaagcatgggtaagaaaa
gctcaagtcctgtgactttccctctgcctcacagagcagacaggtcatct
ctcttcatgacttgttcactgcctgcctctgctctcttctcagtcccaca
gtgcagcctgccagagttttctcctctctcctcctctctcctcctcctca
gtgctctgctgggacttgtatctcccagcaagcccatgaattattaaaaa
taatttgttttccaaagagatagttttttcatctctacagacttttgtaa
ggtacaaggatgccagactgggtgcccataacttaactaaaattccttgg
ctctcgatcaagttggtagcagccttaaaactttattcccatctgccttt
tgaagaaagcagactcgggtttgaaggcttgaccttccttgcgaagaaga
ctcaggatgaagccaaagctgcacttggacttgtggtcagcatcatgttc
ctccaccttggctcctcttggccaagttatctatgaaacttcactcattt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50169842_50170991
seq2: B6Ng01-179K24.b_47_1207

seq1  GAATTCTCCGTACCAGTTTCCACAGCAGCTGTACCTGTTTGCAATCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTACCAGTTTCCACAGCAGCTGTACCTGTTTGCAATCCCAC  50

seq1  CAACAGTGAATAATGTTTCCCCCTTTACTCCATCTTCTCCAGCATTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGAATAATGTTTCCCCCTTTACTCCATCTTCTCCAGCATTTGTT  100

seq1  GTAGGTTGTTCCCTTGATCTTTGTCATTCTGACTGAATAAGATGAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTGTTCCCTTGATCTTTGTCATTCTGACTGAATAAGATGAAATCT  150

seq1  CAAGGTTGGTTTGATTTGAATTTCCACTATATATTTTAAAGAATTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTGGTTTGATTTGAATTTCCACTATATATTTTAAAGAATTTAAAA  200

seq1  AAATATGTGTATGTTCTGCATTCATGGATATATGTGCATCATATGTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTGTATGTTCTGCATTCATGGATATATGTGCATCATATGTATGT  250

seq1  CTGGTGCCTAAGAAGGCCAGAAGGCATCGAGTCTTCTGGAATTGGACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTAAGAAGGCCAGAAGGCATCGAGTCTTCTGGAATTGGACTTA  300

seq1  CAGATGGTTTTAAGTGCTACATGGAAGCTGGGAAATTATCTCAGGTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTTTAAGTGCTACATGGAAGCTGGGAAATTATCTCAGGTCCTC  350

seq1  CACAAGAGTAGCCAATGCTCTTAATATCTAAGCTCTCTCTCTAGCACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGTAGCCAATGCTCTTAATATCTAAGCTCTCTCTCTAGCACCCA  400

seq1  TTCTTAGATTGCACAGCCCCACCATGTTTCAAAATGTGGACAGTGAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGATTGCACAGCCCCACCATGTTTCAAAATGTGGACAGTGAGCTG  450

seq1  GTGAGATGGCTTAGATAGTGAAGGTGCCTGCAGTTAAGCCTGACGATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATGGCTTAGATAGTGAAGGTGCCTGCAGTTAAGCCTGACGATTCC  500

seq1  TGCCACGGACATGGTGAAAAGAGGGAACTGAGTTTCCAAAGTTGTCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACGGACATGGTGAAAAGAGGGAACTGAGTTTCCAAAGTTGTCCTGG  550

seq1  AATTTCCACAGATATTCACACACATACACATATTCACACTCATGAGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCACAGATATTCACACACATACACATATTCACACTCATGAGTACA  600

seq1  TGTACACAAAATAAGTCAACAAAAATGTAATGATTTGGAAAAGATAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAAAATAAGTCAACAAAAATGTAATGATTTGGAAAAGATAAAAC  650

seq1  ATGCAGCTCAATAGCTAGCAATTTTAAAACTAAGTGGTTTTGAAGTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTCAATAGCTAGCAATTTTAAAACTAAGTGGTTTTGAAGTTATA  700

seq1  TAAGTTGTATAGTGACATTAATCTTTTTATATGAAACGAAATAATAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTATAGTGACATTAATCTTTTTATATGAAACGAAATAATAAGAC  750

seq1  ATTATTTTAAGAGCTGACATTTGCCAAATATGTTCAGAGTGTTCTTAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTAAGAGCTGACATTTGCCAAATATGTTCAGAGTGTTCTTAGGA  800

seq1  GACTGTTGTTCTGATTGTCTGGAGGCTTCATAGGGAGTGATTACCTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTGTTCTGATTGTCTGGAGGCTTCATAGGGAGTGATTACCTTTAA  850

seq1  AC--TTTTTTTTTTGTA-TTTCAAAGTTCAACACCCATCATT-CCAGGTC  896
      ||  ||||||||||||| |||||||||||||||||||||||| |||||||
seq2  ACTTTTTTTTTTTTGTATTTTCAAAGTTCAACACCCATCATTCCCAGGTC  900

seq1  TAG-AAACTCAAATTTTTTGTACAAGTGT-CAAACGAA-TTCTTTGG--A  941
      ||| ||||||||||||||||||||||||| |||||||| ||||||||  |
seq2  TAGAAAACTCAAATTTTTTGTACAAGTGTCCAAACGAATTTCTTTGGGAA  950

seq1  AAAGAACTCATGCTAAA-CCAACTCAGTTA-GGTCACTGTGTCCCAGTTA  989
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  AAAGAACTCATGCTAAACCCAACTCAGTTAGGGTCACTGTGTCCCAGTTA  1000

seq1  ATCAGGGGATTTGCTACGGGATTACATCCATAATGG-AAGCC-AGGACAC  1037
      |||||||   |||||||||||||||||||||||||| ||||| |||||||
seq2  ATCAGGG--ATTGCTACGGGATTACATCCATAATGGAAAGCCAAGGACAC  1048

seq1  AGGTAGAAGGAGCAAACTGGTACAACCTGTACA-TGTTCCTCTTCC-TTA  1085
      |||||| |||||| ||||||||||  ||||||| |||| ||||||| |||
seq2  AGGTAG-AGGAGC-AACTGGTACA--CTGTACATTGTTTCTCTTCCTTTA  1094

seq1  CAGATCAAATAAATAGTGAAGATA--TAAGCCGGAATTTGCTTATTGGAT  1133
      |||||| |||||||||||| ||||  |||||||| ||| ||| |||||||
seq2  CAGATCCAATAAATAGTGAGGATAATTAAGCCGG-ATTGGCTAATTGGAT  1143

seq1  -CTAGATCCAAAGAAAGC  1150
       |||||  ||||||||||
seq2  CCTAGAATCAAAGAAAGC  1161

seq1: chr14_50255637_50256712
seq2: B6Ng01-179K24.g_69_1169 (reverse)

seq1  TAAA-GAGTGAAGTTTTCATAG-TAACT--GCC-AGAGGAGCCAAAGT-G  44
      |||| |||||||| |||||||| |||||  ||| ||||||||||| || |
seq2  TAAATGAGTGAAG-TTTCATAGATAACTTGGCCAAGAGGAGCCAAGGTGG  49

seq1  AG--ACATGATGCTGACCACCAGTCCCAAGTGCAGGCTTTGGC-TCATCC  91
      ||  |||||||||||||||| ||| ||||||||| |||||||| ||||||
seq2  AGGAACATGATGCTGACCACAAGT-CCAAGTGCA-GCTTTGGCTTCATCC  97

seq1  TGAGTCT--CTCGC-AGGAA-GTCAAGCC-TCAA--CCGAGTCTGCTTTC  134
      |||||||   |||| ||||| |||||||| ||||  ||||||||||||||
seq2  TGAGTCTTCTTCGCAAGGAAGGTCAAGCCTTCAAACCCGAGTCTGCTTTC  147

seq1  T--CAAAGGCAGATGGAAAT-AAGTTTT-AGGCTGCTACC-ACTTGATCG  179
      |   |||||||||||| ||| ||||||| ||||||||||| |||||||||
seq2  TTCAAAAGGCAGATGGGAATAAAGTTTTAAGGCTGCTACCAACTTGATCG  197

seq1  AGAGCC-AGGAA-TTTAG-TAAGTTATGGGCA-CCAGTCTGGCAT-CTTG  224
      |||||| ||||| ||||| ||||||||||||| |||||||||||| ||||
seq2  AGAGCCAAGGAATTTTAGTTAAGTTATGGGCACCCAGTCTGGCATCCTTG  247

seq1  TACCTTACAAAAGTCTGTAGAGATG-AAAAACTATCTC-TTGGAAAACAA  272
      ||||||||||||||||||||||||| |||||||||||| |||||||||||
seq2  TACCTTACAAAAGTCTGTAGAGATGAAAAAACTATCTCTTTGGAAAACAA  297

seq1  ATTATTTTTAATAATTCATGGGCTTGCTGGGAGATACAAGTCCCAGCAGA  322
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTAATAATTCATGGGCTTGCTGGGAGATACAAGTCCCAGCAGA  347

seq1  GCACTGAGGAGGAGGAGAGAGGAGGAGAGAGGAGAAAACTCTGGCAGGCT  372
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAGGAGGAGGAGAGAGGAGGAGAGAGGAGAAAACTCTGGCAGGCT  397

seq1  GCACTGTGGGACTGAGAAGAGAGCAGAGGCAGGCAGTGAACAAGTCATGA  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGGGACTGAGAAGAGAGCAGAGGCAGGCAGTGAACAAGTCATGA  447

seq1  AGAGAGATGACCTGTCTGCTCTGTGAGGCAGAGGGAAAGTCACAGGACTT  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGACCTGTCTGCTCTGTGAGGCAGAGGGAAAGTCACAGGACTT  497

seq1  GAGCTTTTCTTACCCATGCTTAGCTCCATTCTAGAATAGCTCTTTATATC  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTTCTTACCCATGCTTAGCTCCATTCTAGAATAGCTCTTTATATC  547

seq1  AGCATTTTCCATTACCCGAAAACAAGAAAACTGCTTTGCTTTGCTTTGAA  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCCATTACCCGAAAACAAGAAAACTGCTTTGCTTTGCTTTGAA  597

seq1  CTTCTTAAAACCTTTTAGGGCTTTGGTATGAGAGTGTACGATTGCTGTTA  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAAACCTTTTAGGGCTTTGGTATGAGAGTGTACGATTGCTGTTA  647

seq1  TGCCTTTAGTTCTCATTATTATCAGTTCCCTACCATCCCAGCCTCCATTC  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTAGTTCTCATTATTATCAGTTCCCTACCATCCCAGCCTCCATTC  697

seq1  CCAACTTGTTCTGTTGGCCTTTGTATTCAGTCAGTCTTAGTGCTCCCTGC  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTGTTCTGTTGGCCTTTGTATTCAGTCAGTCTTAGTGCTCCCTGC  747

seq1  CCCAGGACCATGGTCCATGTTTCTCATTCCATCTTGAATGTTTCTACCTA  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACCATGGTCCATGTTTCTCATTCCATCTTGAATGTTTCTACCTA  797

seq1  GTCTTTTGATTATTTCCATCTTTTTCCTTCTTCAAGCTTCAGCCCTCCCT  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGATTATTTCCATCTTTTTCCTTCTTCAAGCTTCAGCCCTCCCT  847

seq1  CACCACAGAAGGCAGTTCAGCTCTTCCTGTTTCTGTTCCCAGTGTCCATG  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGAAGGCAGTTCAGCTCTTCCTGTTTCTGTTCCCAGTGTCCATG  897

seq1  TAGACACCCTTAATGGTGTTCTAACCTTCTGACACTTACTGACCAGGTCG  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACCCTTAATGGTGTTCTAACCTTCTGACACTTACTGACCAGGTCG  947

seq1  AGTTTCTGTTCAGTTGTAAGTTCTTTGAAAGTGGAGACCTGAACTACCCA  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGTTCAGTTGTAAGTTCTTTGAAAGTGGAGACCTGAACTACCCA  997

seq1  ATTCCCAGCATAGGAAAGGTAGCTTACAAATCCTTTTGAGGAAATAACTA  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGCATAGGAAAGGTAGCTTACAAATCCTTTTGAGGAAATAACTA  1047

seq1  AATAAAGGACTCAGTGTTTTGATCCACTTGCTTAAGTTTGCACAACTGGA  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGACTCAGTGTTTTGATCCACTTGCTTAAGTTTGCACAACTGGA  1097

seq1  ATTC  1076
      ||||
seq2  ATTC  1101