BAC Information

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BAC

Clone NameB6Ng01-181L15
Chromosome14 (Build37)
Map Location 21,071,685 - 21,186,719
singlet/doubletdoublet
Overlap geneLOC100039106, Kcnk16, Nudt13, Ecd, AA536717
Upstream geneLOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5
Downstream geneDnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181L15.bB6Ng01-181L15.g
ACCGA007810GA007811
length1,141283
definitionB6Ng01-181L15.b B6Ng01-181L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,185,588 - 21,186,719)(21,071,685 - 21,071,967)
sequence
gaattcctaggttatatggtaatttaacgttttaggaactttccacaatg
gctgtatatctttaatttccaccagcaattcaagagggctccatttttgc
aattctttccccattttgtttattcttaaaagattcacattttagtaaaa
gtcatctcttacctaccccaccccccacatacatgcacacatatacgcac
gcacacacactcgcgagcacacacacaccctagcgaggacaatgaggcat
ttcactgtgttttttatctgcattcccctaatgattaattgatctacacc
atcttttcatatgacttctgaccatttttagatctttggtgaaatatctg
ttgaaggcatttgcccagttttataaactgggttgtgtcctttttaaaaa
ttaagttgcagttctttctctcctctggataccagctcctaatcaggtat
attattataattatacatatgtattataatcatatatcgtatgtggtttg
tctttcaccatcttaatgtttgtggacatacatgtgccaccgctcaagtg
tggaagtcaaaggacaccgtgctagatttgtttctctcctttatatagct
tccaaggactgacctccggttgtcaggcctgatgggcaagcgcccttagc
cactgagtgttccatggcctgcttatccacttttgagttagcttttgtaa
ataatggggtgtgagggtccaaggtgacttttttttctgtatgggatcca
cttgctccagctgcatttatcgggaaggcgtcacctgcactgactaatct
ccggaggcagccctgttaaaatccttcagagtaggtgttggggtttgttt
gtttttacacatggatatatctgtcccctggtagtctttttttttctctc
tctctctttctttgctagtcttaaataaagacgtatttttaagtattttt
aaaattcaaaagtgagtttcctgactttgtttcttttctcactactgttt
tggcggtggagggttctgagcagctctcagtaggacgtcagcagcttgct
tgcctatttccccaaacacgccgcttgaactgttctgcatcttgaaagca
agcactctctcagtcatctgctgttcaacacttcaagctcc
agctttctccttgttaaagcaggggtgatgcactcactctaggttggaga
ttgagtgacttgccatcctggcagggtctcaactgtccattgaaggatta
cagagagttgtgcaggacgaccatccaagtcagactgctaacattgtcat
catatccgctggaccacttgccaaagatcattacggctggatttgtggat
tgctgatattccctcagagaagatgggggtggggagactcactggactct
cacctgagtatgtggtgtgtggtgtgtggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21185588_21186719
seq2: B6Ng01-181L15.b_48_1188 (reverse)

seq1  GGAGCTGGGAGTG-TGAACAGACAGATG-CTGAGAGAGTGCTTGGCTCTC  48
      |||||| | |||| ||||||| |||||| |||||||||||||| ||| ||
seq2  GGAGCTTGAAGTGTTGAACAG-CAGATGACTGAGAGAGTGCTT-GCTTTC  48

seq1  -AGATGCAGAACCAGTCCAGCGGCGTGTTTGGGGAAATAGGCAAGC-AGC  96
       |||||||||||   || |||||||||||||||||||||||||||| |||
seq2  AAGATGCAGAACAGTTCAAGCGGCGTGTTTGGGGAAATAGGCAAGCAAGC  98

seq1  TGCTGACGTCCT-CTG-GAGCTGCTCAG-ACCCTCCACCGCCAAAACAGT  143
      |||||||||||| ||| ||||||||||| |||||||||||||||||||||
seq2  TGCTGACGTCCTACTGAGAGCTGCTCAGAACCCTCCACCGCCAAAACAGT  148

seq1  AGTGAGAAA--GAACAAAGTCAGG-AACTCACTTTTTGAATTTT-AAAAT  189
      |||||||||   |||||||||||| ||||||| ||||||||||| |||||
seq2  AGTGAGAAAAGAAACAAAGTCAGGAAACTCAC-TTTTGAATTTTAAAAAT  197

seq1  ACTT-AAAATACGTCTTTTATTAAGACTAGCAAAGGAAGAGAGAGAGAG-  237
      |||| |||||||||||||  ||||||||||||||| ||||||||||||| 
seq2  ACTTAAAAATACGTCTTTATTTAAGACTAGCAAAGAAAGAGAGAGAGAGA  247

seq1  AAAAAAAAGACTACCAGGGGACAGATATATCCATGTGGTAAAAACAAACA  287
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAAAAAGACTACCAGGGGACAGATATATCCATGT-GTAAAAACAAACA  296

seq1  AACCCCAACACCTACTCTGAAGGATTTTAACAGGGCTGCCTCCGGAGATT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAACACCTACTCTGAAGGATTTTAACAGGGCTGCCTCCGGAGATT  346

seq1  AGTCAGTGCAGGTGACGCCTTCCCGATAAATGCAGCTGGAGCAAGTGGAT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCAGGTGACGCCTTCCCGATAAATGCAGCTGGAGCAAGTGGAT  396

seq1  CCCATACAGAAAAAAAAGTCACCTTGGACCCTCACACCCCATTATTTACA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACAGAAAAAAAAGTCACCTTGGACCCTCACACCCCATTATTTACA  446

seq1  AAAGCTAACTCAAAAGTGGATAAGCAGGCCATGGAACACTCAGTGGCTAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAACTCAAAAGTGGATAAGCAGGCCATGGAACACTCAGTGGCTAA  496

seq1  GGGCGCTTGCCCATCAGGCCTGACAACCGGAGGTCAGTCCTTGGAAGCTA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGCTTGCCCATCAGGCCTGACAACCGGAGGTCAGTCCTTGGAAGCTA  546

seq1  TATAAAGGAGAGAAACAAATCTAGCACGGTGTCCTTTGACTTCCACACTT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGAGAGAAACAAATCTAGCACGGTGTCCTTTGACTTCCACACTT  596

seq1  GAGCGGTGGCACATGTATGTCCACAAACATTAAGATGGTGAAAGACAAAC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGTGGCACATGTATGTCCACAAACATTAAGATGGTGAAAGACAAAC  646

seq1  CACATACGATATATGATTATAATACATATGTATAATTATAATAATATACC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACGATATATGATTATAATACATATGTATAATTATAATAATATACC  696

seq1  TGATTAGGAGCTGGTATCCAGAGGAGAGAAAGAACTGCAACTTAATTTTT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGGAGCTGGTATCCAGAGGAGAGAAAGAACTGCAACTTAATTTTT  746

seq1  AAAAAGGACACAACCCAGTTTATAAAACTGGGCAAATGCCTTCAACAGAT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGACACAACCCAGTTTATAAAACTGGGCAAATGCCTTCAACAGAT  796

seq1  ATTTCACCAAAGATCTAAAAATGGTCAGAAGTCATATGAAAAGATGGTGT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACCAAAGATCTAAAAATGGTCAGAAGTCATATGAAAAGATGGTGT  846

seq1  AGATCAATTAATCATTAGGGGAATGCAGATAAAAAACACAGTGAAATGCC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATTAATCATTAGGGGAATGCAGATAAAAAACACAGTGAAATGCC  896

seq1  TCATTGTCCTCGCTAGGGTGTGTGTGTGCTCGCGAGTGTGTGTGCGTGCG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCCTCGCTAGGGTGTGTGTGTGCTCGCGAGTGTGTGTGCGTGCG  946

seq1  TATATGTGTGCATGTATGTGGGGGGTGGGGTAGGTAAGAGATGACTTTTA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGTGCATGTATGTGGGGGGTGGGGTAGGTAAGAGATGACTTTTA  996

seq1  CTAAAATGTGAATCTTTTAAGAATAAACAAAATGGGGAAAGAATTGCAAA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGTGAATCTTTTAAGAATAAACAAAATGGGGAAAGAATTGCAAA  1046

seq1  AATGGAGCCCTCTTGAATTGCTGGTGGAAATTAAAGATATACAGCCATTG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGCCCTCTTGAATTGCTGGTGGAAATTAAAGATATACAGCCATTG  1096

seq1  TGGAAAGTTCCTAAAACGTTAAATTACCATATAACCTAGGAATTC  1132
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTTCCTAAAACGTTAAATTACCATATAACCTAGGAATTC  1141

seq1: chr14_21071685_21071967
seq2: B6Ng01-181L15.g_76_358

seq1  AGCTTTCTCCTTGTTAAAGCAGGGGTGATGCACTCACTCTAGGTTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTCCTTGTTAAAGCAGGGGTGATGCACTCACTCTAGGTTGGAGA  50

seq1  TTGAGTGACTTGCCATCCTGGCAGGGTCTCAACTGTCCATTGAAGGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGACTTGCCATCCTGGCAGGGTCTCAACTGTCCATTGAAGGATTA  100

seq1  CAGAGAGTTGTGCAGGACGACCATCCAAGTCAGACTGCTAACATTGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTTGTGCAGGACGACCATCCAAGTCAGACTGCTAACATTGTCAT  150

seq1  CATATCCGCTGGACCACTTGCCAAAGATCATTACGGCTGGATTTGTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCGCTGGACCACTTGCCAAAGATCATTACGGCTGGATTTGTGGAT  200

seq1  TGCTGATATTCCCTCAGAGAAGATGGGGGTGGGGAGACTCACTGGACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATATTCCCTCAGAGAAGATGGGGGTGGGGAGACTCACTGGACTCT  250

seq1  CACCTGAGTATGTGGTGTGTGGTGTGTGGTGTG  283
      |||||||||||||||||||||||||||||||||
seq2  CACCTGAGTATGTGGTGTGTGGTGTGTGGTGTG  283