BAC Information

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BAC

Clone NameB6Ng01-184C04
Chromosome14 (Build37)
Map Location 27,124,309 - 27,275,449
singlet/doubletdoublet
Overlap geneLOC100039538, 4933413J09Rik, Slmap
Upstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527
Downstream geneLOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C04.bB6Ng01-184C04.g
ACCGA009585GA009586
length725940
definitionB6Ng01-184C04.b B6Ng01-184C04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,124,309 - 27,125,027)(27,274,515 - 27,275,449)
sequence
gaattcaaaagactttgaacaaaagcctgtaacatatctcatctttggcc
ttgggagggcttgacctacaaagccccatagaggaatggctatatttgcc
ttgataggaatattacagtctgtgactgccttcctaccctgtgcccccag
gccagtcacagagtgtaggtcagtgtctctaagtcttcagtgagagaatg
ctgcttaattttcagttggtttgtgtttttggttttgtggtttttgtggt
ttttgtctttgttattgtttttgacattttgcaaaggctattcactgttt
atgttgatcgccttcttaaagtttttcttgaaaaaaaaaatgactgtagt
ttttatgaataaaaagcagttttcaactctttacccttaagaccagcttt
tttatttaggtatggtgtcacagtcctgtaaccccagaactcacaagcag
aggtgaatgcctgcaagttcccggtagcccgggctacagagttcccagcc
agggatcttaggactacacaggaggattgggtgtggatagtgaggctgac
tgcatggatacacactttatgatgaagtaccatactgtatgcatgtcatc
atgtatttagctgtcccctaaaatgtggtacttttttatttaaaagaaat
taggaaaccccaaagctatcttgcctcctgtttttcttgcaatatggcac
cagtgatagccacacaatagagata
gaattccaggaattgataaatattggtttgaaatttggtttcatatctgt
cataaagtcctttagttatgttcaagtttggtttaaaatgagttttaaca
attttcggtaagcatacataaagatttctgacattttcgtccatgtgtgc
tcttccttaccatcccccctctactgactccttctctccccaaaggttct
tctttgctttatatccagtaagtggatttaagctagattacatgcaagag
atgtatttatctttttcctcccactatcctttcttgttctctcccctttt
agaccactttcctccccgtccataatcccttcctatttcccccatcacat
gtgtgatacatacatttaaatctagattttgcatatgaaagaagcttgtg
aaagagtctggcttctcttgtttaacatttgatcatcaacatggatacat
tttcttgcagatgatcaataaaactctgttctctcatgtactacattttc
tttacccgtccaaacaaaatttcacactcaacatgatattgcatagtttg
agttttgaaagtgtttaatttaaagtttatgtaaaatgattttctaattt
gaaataatctactgagggctgcagtttttctagaattagctcccgttggc
aaattctatttgtctaatttaaggcattaattccaaatttctgtcccagt
gaatttttatttttttacttggaactgtgctgtgcttctcaccgatgttt
ctaaaaccgaagccgtactgatcactctcccctgtcttcatagctaccac
gggcctttgggtgtgtgtgactagggtcagaggaaagaacacttgagagg
ttaaaaaggcaggcaacaggatcggtgtcgcaacagacccggaagacaaa
ggagaggcagaggctgccgggttgttgggtgggcggcgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_27124309_27125027
seq2: B6Ng01-184C04.b_44_768

seq1  GAATTCAAAAGACTTTGAACAAAAGCCTGTAACATATCTCATCTTTGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGACTTTGAACAAAAGCCTGTAACATATCTCATCTTTGGCC  50

seq1  TTGGGAGGGCTTGACCTACAAAGCCCCATAGAGGAATGGCTATATTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGGCTTGACCTACAAAGCCCCATAGAGGAATGGCTATATTTGCC  100

seq1  TTGATAGGAATATTACAGTCTGTGACTGCCTTCCTACCCTGTGCCCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGGAATATTACAGTCTGTGACTGCCTTCCTACCCTGTGCCCCCAG  150

seq1  GCCAGTCACAGAGTGTAGGTCAGTGTCTCTAAGTCTTCAGTGAGAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCACAGAGTGTAGGTCAGTGTCTCTAAGTCTTCAGTGAGAGAATG  200

seq1  CTGCTTAATTTTCAGTTGGTTTGTGTTTTTGGTTTTGTGGTTTTTGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAATTTTCAGTTGGTTTGTGTTTTTGGTTTTGTGGTTTTTGTGGT  250

seq1  TTTTGTCTTTGTTATTGTTTTTGACATTTTGCAAAGGCTATTCACTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTTGTTATTGTTTTTGACATTTTGCAAAGGCTATTCACTGTTT  300

seq1  ATGTTGATCGCCTTCTTAAAGTTTTTCTTGAAAAAAAAAATGACTGTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATCGCCTTCTTAAAGTTTTTCTTGAAAAAAAAAATGACTGTAGT  350

seq1  TTTTATGAATAAAAAGCAGTTTTCAACTCTTTACCCTTAAGACCAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAATAAAAAGCAGTTTTCAACTCTTTACCCTTAAGACCAGCTTT  400

seq1  TTTATTTAGGTATGGTGTCACAGTCCTGTAACCCCAGAACTCACAAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGGTATGGTGTCACAGTCCTGTAACCCCAGAACTCACAAGCAG  450

seq1  AGGTGAATGCCTGCAAGTTCCCGGTAGCCCGGGCTACAGAGTTCCCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAATGCCTGCAAGTTCCCGGTAGCCCGGGCTACAGAGTTCCCAGCC  500

seq1  AGGGATCTTAGGACTACACAGGAGGATTGGGTGTGGATAGTGAGGCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCTTAGGACTACACAGGAGGATTGGGTGTGGATAGTGAGGCTGAC  550

seq1  TGCATGGATACACACTTTATGATGAAGTACCATACTGTATGCATGTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGATACACACTTTATGATGAAGTACCATACTGTATGCATGTCATC  600

seq1  ATGTATTTAGCTGT-CCCTAAAATGTGGTAC-TTTTTATTT-AAAGAAAT  647
      |||||||||||||| |||||||||||||||| ||||||||| ||||||||
seq2  ATGTATTTAGCTGTCCCCTAAAATGTGGTACTTTTTTATTTAAAAGAAAT  650

seq1  TAGGAAA-CCCAAAGCTATC-TGCCT-CTGTTTTTCTTGCAATATGGCAC  694
      ||||||| |||||||||||| ||||| |||||||||||||||||||||||
seq2  TAGGAAACCCCAAAGCTATCTTGCCTCCTGTTTTTCTTGCAATATGGCAC  700

seq1  CAGTGATAGCCACACAATAGAGATA  719
      |||||||||||||||||||||||||
seq2  CAGTGATAGCCACACAATAGAGATA  725

seq1: chr14_27274515_27275449
seq2: B6Ng01-184C04.g_63_1002 (reverse)

seq1  TCCGCC-CCCACCCA--CACCCCGCAGCCTCTGCCTCTCCTTTGTCTTCC  47
      | |||| ||||||||   |||| |||||||||||||||||||||||||||
seq2  TTCGCCGCCCACCCAACAACCCGGCAGCCTCTGCCTCTCCTTTGTCTTCC  50

seq1  -GGTCTGTTGCGACACCGATCCTGTTGCCTGCCTTTTTAACCTCTC-AGT  95
       ||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGTCTGTTGCGACACCGATCCTGTTGCCTGCCTTTTTAACCTCTCAAGT  100

seq1  GTTCTTTCCTCTGACCCTAGTCACACACACCCAAAGGCCCGTGGTAGCTA  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCCTCTGACCCTAGTCACACACACCCAAAGGCCCGTGGTAGCTA  150

seq1  TGAAGACAGGGGAGAGTGATCAGTACGGCTTCGGTTTTAGAAACATCGGT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACAGGGGAGAGTGATCAGTACGGCTTCGGTTTTAGAAACATCGGT  200

seq1  GAGAAGCACAGCACAGTTCCAAGTAAAAAAATAAAAATTCACTGGGACAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCACAGCACAGTTCCAAGTAAAAAAATAAAAATTCACTGGGACAG  250

seq1  AAATTTGGAATTAATGCCTTAAATTAGACAAATAGAATTTGCCAACGGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGGAATTAATGCCTTAAATTAGACAAATAGAATTTGCCAACGGGA  300

seq1  GCTAATTCTAGAAAAACTGCAGCCCTCAGTAGATTATTTCAAATTAGAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTCTAGAAAAACTGCAGCCCTCAGTAGATTATTTCAAATTAGAAA  350

seq1  ATCATTTTACATAAACTTTAAATTAAACACTTTCAAAACTCAAACTATGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTACATAAACTTTAAATTAAACACTTTCAAAACTCAAACTATGC  400

seq1  AATATCATGTTGAGTGTGAAATTTTGTTTGGACGGGTAAAGAAAATGTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCATGTTGAGTGTGAAATTTTGTTTGGACGGGTAAAGAAAATGTAG  450

seq1  TACATGAGAGAACAGAGTTTTATTGATCATCTGCAAGAAAATGTATCCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGAGAACAGAGTTTTATTGATCATCTGCAAGAAAATGTATCCAT  500

seq1  GTTGATGATCAAATGTTAAACAAGAGAAGCCAGACTCTTTCACAAGCTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGATCAAATGTTAAACAAGAGAAGCCAGACTCTTTCACAAGCTTC  550

seq1  TTTCATATGCAAAATCTAGATTTAAATGTATGTATCACACATGTGATGGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATGCAAAATCTAGATTTAAATGTATGTATCACACATGTGATGGG  600

seq1  GGAAATAGGAAGGGATTATGGACGGGGAGGAAAGTGGTCTAAAAGGGGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGGAAGGGATTATGGACGGGGAGGAAAGTGGTCTAAAAGGGGAG  650

seq1  AGAACAAGAAAGGATAGTGGGAGGAAAAAGATAAATACATCTCTTGCATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGAAAGGATAGTGGGAGGAAAAAGATAAATACATCTCTTGCATG  700

seq1  TAATCTAGCTTAAATCCACTTACTGGATATAAAGCAAAGAAGAACCTTTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAGCTTAAATCCACTTACTGGATATAAAGCAAAGAAGAACCTTTG  750

seq1  GGGAGAGAAGGAGTCAGTAGAGGGGGGATGGTAAGGAAGAGCACACATGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAAGGAGTCAGTAGAGGGGGGATGGTAAGGAAGAGCACACATGG  800

seq1  ACGAAAATGTCAGAAATCTTTATGTATGCTTACCGAAAATTGTTAAAACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAATGTCAGAAATCTTTATGTATGCTTACCGAAAATTGTTAAAACT  850

seq1  CATTTTAAACCAAACTTGAACATAACTAAAGGACTTTATGACAGATATGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAACCAAACTTGAACATAACTAAAGGACTTTATGACAGATATGA  900

seq1  AACCAAATTTCAAACCAATATTTATCAATTCCTGGAATTC  935
      ||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATTTCAAACCAATATTTATCAATTCCTGGAATTC  940