BAC Information

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BAC

Clone NameB6Ng01-184D07
Chromosome14 (Build37)
Map Location 24,336,517 - 24,337,249
singlet/doubletsinglet
Overlap geneKcnma1
Upstream gene1700112E06Rik, EG435392, LOC665068
Downstream geneLOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184D07.bB6Ng01-184D07.g
ACCGA009639GA009640
length1,241735
definitionB6Ng01-184D07.b B6Ng01-184D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaccagcgagcggtcgccatctgggttccgggactccgcgggac
ctaggaaattagtctgaacaggttagagggtgcaccagagaaccggacag
cttctgggacgggcggaagcacagagccgctgaggcagcagcctgggcgg
gcagcagacaaccggccaccatccggaccagaggacaggtgtccgcctgg
cttgggaggcggcctcagcctcagcagcagcagtcgccatcttggttccg
ggactcagcagaacttaggaaattagtctgaacaggttagagggtgcgcc
agagaacctgacagcttctgggacgggcagaagcacagagccgctgaggc
agcagcctgggcgggccgcagacaaccggccaccatccggaccagaggac
aggtgtccgcctggcttgggaggcgacctcagcctcagcagcagcggtcg
ccatctgggttccgggactccgcgggacctaggaaattagtctgaacagg
ttagagggtgcaccagagaaccggacagcttctggaacgggcggaagcac
agagccgctgaggcagcagccggggcgggccgcagataaccggccaccat
ccggaccagaggacaggtgtccgcctggcttgggaggcgacctcagcctc
agcagcagcggtcgccatcttggttccgggactcagcagaatctaggaaa
ttagtctgaacaggttagagggtgtgccagagaaccggacagcttctgga
acgggcagaagcacagagccgctgaggcagcagcctgggcgggccgcaga
taaccggccaccatccggaccagaggacaggtgtccgcctggctcgggag
acggcctcggcctcaggagcagcggtcaccatcttggttccaggactccc
tggaacttaggattttagtctgcacaggtgagagtctgcaccaccagaag
ctgaacagcttctgggaactgccaaagccacacaagctttctgagagagg
cccttgttttggggccttcttctttcgaccagggagaggttccaaaaaca
agaatatctgccacacttccctgttaggagagctgccaagcagagatgct
cctggagcaactgaactcgaaggagagatctgtcttcccaaggtctgctg
aagaacgtaaacgaatctcacgtagaacatctctaaacagattcactatt
actacctaaacttcgagagaagttaccagagatgtgcgcga
gaattcactagttatccagcataaccaaacctgtgagctccaggctgagt
gagagatctcatttcagaaaataatgtagagagtaattgaggaagatgcc
tgatgccagcctctggcttccatgtgcacatgtgaccacctgtgcatgtc
cagatacaaattcccctctctgaaaggaaataaaggagaaaagagttagc
aaggtggcagtgatgtgataaaacctgaacactggaatgggtgggttggg
gagcaggacagggggaggatatagggggctttggggatagcatttgaaat
gtaaatgaagaaaatatctaataaaaatataaataaagaaaatatccaat
taaaaaaaaaactaatgagaaactgaagcaaaggtcaaccaatctaccct
tagagatctatggttgtaagcaacagagatggatttttgctgactaagca
attttttaagacccactaaagtaacttataaaatccaggagaaatctgaa
gagcaaggtcccagaaaggacagaaaacagccagaaatgaggctttgcca
tccaggaagcagaaattcatggtcattcattacagaatttggccaccagc
gtggttcagttgttaccattatctcgagcaatgattagactctcttggat
gtggaaacttgattagaggaaacaaaaccatgtgtaattaaaagtgagat
atgttttgacacaatgaatggtatatggcttgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_24336517_24337249
seq2: B6Ng01-184D07.g_65_799 (reverse)

seq1  TATCAAG-CATATACCATTCATTCTGTC-AAACATATCTCACTTTTAATT  48
      ||||||| ||||||||||||||| |||| |||||||||||||||||||||
seq2  TATCAAGCCATATACCATTCATTGTGTCAAAACATATCTCACTTTTAATT  50

seq1  ACACATGGTTTTGTTTCCTCTAATCAAGTTTCCACATCCAAGAGAGTCTA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGTTTTGTTTCCTCTAATCAAGTTTCCACATCCAAGAGAGTCTA  100

seq1  ATCATTGCTCGAGATAATGGTAACAACTGAACCACGCTGGTGGCCAAATT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGCTCGAGATAATGGTAACAACTGAACCACGCTGGTGGCCAAATT  150

seq1  CTGTAATGAATGACCATGAATTTCTGCTTCCTGGATGGCAAAGCCTCATT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATGAATGACCATGAATTTCTGCTTCCTGGATGGCAAAGCCTCATT  200

seq1  TCTGGCTGTTTTCTGTCCTTTCTGGGACCTTGCTCTTCAGATTTCTCCTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGTTTTCTGTCCTTTCTGGGACCTTGCTCTTCAGATTTCTCCTG  250

seq1  GATTTTATAAGTTACTTTAGTGGGTCTTAAAAAATTGCTTAGTCAGCAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATAAGTTACTTTAGTGGGTCTTAAAAAATTGCTTAGTCAGCAAA  300

seq1  AATCCATCTCTGTTGCTTACAACCATAGATCTCTAAGGGTAGATTGGTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATCTCTGTTGCTTACAACCATAGATCTCTAAGGGTAGATTGGTTG  350

seq1  ACCTTTGCTTCAGTTTCTCATTAGTTTTTTTTTTAATTGGATATTTTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGCTTCAGTTTCTCATTAGTTTTTTTTTTAATTGGATATTTTCTT  400

seq1  TATTTATATTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATTTTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATC  450

seq1  CCCAAAGCCCCCTATATCCTCCCCCTGTCCTGCTCCCCAACCCACCCATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGCCCCCTATATCCTCCCCCTGTCCTGCTCCCCAACCCACCCATT  500

seq1  CCAGTGTTCAGGTTTTATCACATCACTGCCACCTTGCTAACTCTTTTCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTCAGGTTTTATCACATCACTGCCACCTTGCTAACTCTTTTCTC  550

seq1  CTTTATTTCCTTTCAGAGAGGGGAATTTGTATCTGGACATGCACAGGTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTCCTTTCAGAGAGGGGAATTTGTATCTGGACATGCACAGGTGG  600

seq1  TCACATGTGCACATGGAAGCCAGAGGCTGGCATCAGGCATCTTCCTCAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTGCACATGGAAGCCAGAGGCTGGCATCAGGCATCTTCCTCAAT  650

seq1  TACTCTCTACATTATTTTCTGAAATGAGATCTCTCACTCAGCCTGGAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTACATTATTTTCTGAAATGAGATCTCTCACTCAGCCTGGAGCT  700

seq1  CACAGGTTTGGTTATGCTGGATAACTAGTGAATTC  733
      |||||||||||||||||||||||||||||||||||
seq2  CACAGGTTTGGTTATGCTGGATAACTAGTGAATTC  735