BAC Information

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BAC

Clone NameB6Ng01-184O14
Chromosome14 (Build37)
Map Location 80,366,398 - 80,501,160
singlet/doubletdoublet
Overlap geneOlfm4
Upstream gene1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184O14.bB6Ng01-184O14.g
ACCGA010168GA010169
length1,1771,180
definitionB6Ng01-184O14.b B6Ng01-184O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,499,992 - 80,501,160)(80,366,398 - 80,367,575)
sequence
gaattctttaagacatccaagaaacatcaaacagggtaggaaatacgtcg
tttttatttaaattctaagatgctgagccttaaagcaacccggcagtctt
tcccacagtgaagactctccacattcagagcactgttcacgcatgagtag
cctgtcaccagtaattcccagtgaggtcccctgtatattcattttatata
atctgcagagcacaaaattactttgaatatacttttaacactgactttta
gcataacacttgtgttctacaaagtgcatatttttacaaacatggtgtta
ttcgtgcaacgaccaagagggctaacctgtcaaatgcgcatcaggcaatg
gtgggaagagagaggagcccttactctcaagtcagagtagtaactgtggc
aactgcattggcaaatggtttagcatttactaatcatggaacatatgtgt
actctttggcccatcaatttgttcctaagtatagagccaacagtaatggt
gcatacgcttagcaaaagatacatggccgtacatagcagcactgcttcca
agaggcaaaaatgtcaggcaacccaaccttcctcccgaaagagacaacag
atgcagagggtagataccggatgaagagcaatggaagtgaatggattccc
actgcagcagcaatgcaacaactcacaccttttcccctgtgcagaatgaa
agatgtcagtcatgaatagatgcacgctggatgatcctacttacttaaag
cggatatttaaaaacttaatctactgtgttaaatgtcagcacagtgatta
tcctagtcggggtaggagctaggagggcacaacgtggtatcccgagttct
tgtaatgttatatgtctttgcctgtgtaaggcttagatgggaaggtagtt
aaaaacaaaacaaaaaaaaacaaaaacaaaaacaaaaacaaaaccctacc
aagtacatgtctttctcacaatcccttgagtcctttcttccttcgtattc
ctgtagtgtgacttttaaacactaatgtaatgtataataagtgtttgcaa
agtaggtaaaagactctgacatagaggtattggcttcgaataatcaaaaa
ggaaaaacaggcctttcaggaactacttgctttggatgcttggtgaagga
atgtggataagagagaaacactcctcc
gaattcagaccagggagtcttagctggcaggtctacttgatctataagaa
acctgcactagtaaaaagaaatgctgacgaacacagttgaccatataatg
gaactctcagaatatgagatttgttgagagtctcaggagttcgaaaggtt
cattgccttgtttatatatcaactttgacacaggttaggagtcatctggg
aagagagaaacttaattgagaaaatgtttccatcaaattgcctgtaggca
attatgtaggtcatttttcttgattaattattgacatgtgagggcccagc
ccattgtaggcgatgcctttcctggacaggtggtcctgggttgtatgaga
aagaaggcacagaaaaccacaaaggataagccagtaagcagcattcctcc
atagcttctgattcagtttctgcttccaggtcctgctttcagttcctgcc
ctgatttccctcatgaacagaataagtgtctgacccaacagctatacgat
gaaataaatcctctcctccctaaggtgctttctctcacagtagtagaaac
cctacctaagacaaaagggctatacttaaaatttctaagtccttgagtgc
tacaatgaaagccatgttccaaaagattaatgaagtgaacagtggagatt
caggcgatgtcatagcaatccatgactcatcttccagctacctgcaaaac
catcatagaagtgggaagattaagatttcatgtcactactgttggggtag
acaggaacaccttagtgtcttggaaaacaattaactgcttcatattacct
tctgggaccaatccttgggtccccctagatcttaaaacagaagcccgatt
gtgttcattcattcaattcgtttccatttctaatagagaattttatcagc
cagcttttgtttggcaatcacgtcacggaagggaacaaaaaataatggtg
cttcacgccacacacaactattaaaatgttccaacattatgctgttaaac
tccgaagttttagcacagcgttgcaattgtcatttcacaactaaatttac
tctgtgacttatcgaatgttgggaagatcactccttctgcatgtggtggt
gtgctcctgaaggaaatgatctctgcctgaacaacatgttctcaattctt
tccgtacatttatgaacacatctactcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80499992_80501160
seq2: B6Ng01-184O14.b_48_1224 (reverse)

seq1  GGAGGAGTGTTCCTCT-TTCTCCACAT--CCTCACC-AGCATC--AAGCA  44
      ||||||||||| |||| || |||||||  | ||||| ||||||  |||||
seq2  GGAGGAGTGTTTCTCTCTTATCCACATTCCTTCACCAAGCATCCAAAGCA  50

seq1  GGTAGTTCTTG-AAGGCCTGTTTTT-CTTTTTGATTTATCGAAG-CAATA  91
       ||||||| || ||||||||||||| ||||||||||  |||||| |||||
seq2  AGTAGTTCCTGAAAGGCCTGTTTTTCCTTTTTGATTATTCGAAGCCAATA  100

seq1  CCTCTATGTCAGAGTCTTTTACCTACTTTTGCAAACACTTA-TATACATT  140
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  CCTCTATGTCAGAGTCTTTTACCTAC-TTTGCAAACACTTATTATACATT  149

seq1  ACATTAGTGTTTAAAAGTCACACTACAGGAATACGAAGGAAGAAAGGACT  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTGTTTAAAAGTCACACTACAGGAATACGAAGGAAGAAAGGACT  199

seq1  CAAGGGATTGTGAGAAAGACATGTACTTGGTAGGGTTTTGTTTTTGTTTT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATTGTGAGAAAGACATGTACTTGGTAGGGTTTTGTTTTTGTTTT  249

seq1  TGTTTTTGTTTTTTTTTGTTTTGTTTTTTAACTACCTTCCCATCTAAGCC  290
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTTTTTGTTTTTTTTTGTTTTG-TTTTTAACTACCTTCCCATCTAAGCC  298

seq1  TTACACAGGCAAAGACATATAACATTACAAGAACTCGGGATACCACGTTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAGGCAAAGACATATAACATTACAAGAACTCGGGATACCACGTTG  348

seq1  TGCCCTCCTAGCTCCTACCCCGACTAGGATAATCACTGTGCTGACATTTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCTAGCTCCTACCCCGACTAGGATAATCACTGTGCTGACATTTA  398

seq1  ACACAGTAGATTAAGTTTTTAAATATCCGCTTTAAGTAAGTAGGATCATC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTAGATTAAGTTTTTAAATATCCGCTTTAAGTAAGTAGGATCATC  448

seq1  CAGCGTGCATCTATTCATGACTGACATCTTTCATTCTGCACAGGGGAAAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGCATCTATTCATGACTGACATCTTTCATTCTGCACAGGGGAAAA  498

seq1  GGTGTGAGTTGTTGCATTGCTGCTGCAGTGGGAATCCATTCACTTCCATT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAGTTGTTGCATTGCTGCTGCAGTGGGAATCCATTCACTTCCATT  548

seq1  GCTCTTCATCCGGTATCTACCCTCTGCATCTGTTGTCTCTTTCGGGAGGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCATCCGGTATCTACCCTCTGCATCTGTTGTCTCTTTCGGGAGGA  598

seq1  AGGTTGGGTTGCCTGACATTTTTGCCTCTTGGAAGCAGTGCTGCTATGTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGTTGCCTGACATTTTTGCCTCTTGGAAGCAGTGCTGCTATGTA  648

seq1  CGGCCATGTATCTTTTGCTAAGCGTATGCACCATTACTGTTGGCTCTATA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATGTATCTTTTGCTAAGCGTATGCACCATTACTGTTGGCTCTATA  698

seq1  CTTAGGAACAAATTGATGGGCCAAAGAGTACACATATGTTCCATGATTAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAACAAATTGATGGGCCAAAGAGTACACATATGTTCCATGATTAG  748

seq1  TAAATGCTAAACCATTTGCCAATGCAGTTGCCACAGTTACTACTCTGACT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTAAACCATTTGCCAATGCAGTTGCCACAGTTACTACTCTGACT  798

seq1  TGAGAGTAAGGGCTCCTCTCTCTTCCCACCATTGCCTGATGCGCATTTGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTAAGGGCTCCTCTCTCTTCCCACCATTGCCTGATGCGCATTTGA  848

seq1  CAGGTTAGCCCTCTTGGTCGTTGCACGAATAACACCATGTTTGTAAAAAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAGCCCTCTTGGTCGTTGCACGAATAACACCATGTTTGTAAAAAT  898

seq1  ATGCACTTTGTAGAACACAAGTGTTATGCTAAAAGTCAGTGTTAAAAGTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTTTGTAGAACACAAGTGTTATGCTAAAAGTCAGTGTTAAAAGTA  948

seq1  TATTCAAAGTAATTTTGTGCTCTGCAGATTATATAAAATGAATATACAGG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAGTAATTTTGTGCTCTGCAGATTATATAAAATGAATATACAGG  998

seq1  GGACCTCACTGGGAATTACTGGTGACAGGCTACTCATGCGTGAACAGTGC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTCACTGGGAATTACTGGTGACAGGCTACTCATGCGTGAACAGTGC  1048

seq1  TCTGAATGTGGAGAGTCTTCACTGTGGGAAAGACTGCCGGGTTGCTTTAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGTGGAGAGTCTTCACTGTGGGAAAGACTGCCGGGTTGCTTTAA  1098

seq1  GGCTCAGCATCTTAGAATTTAAATAAAAACGACGTATTTCCTACCCTGTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCATCTTAGAATTTAAATAAAAACGACGTATTTCCTACCCTGTT  1148

seq1  TGATGTTTCTTGGATGTCTTAAAGAATTC  1169
      |||||||||||||||||||||||||||||
seq2  TGATGTTTCTTGGATGTCTTAAAGAATTC  1177

seq1: chr14_80366398_80367575
seq2: B6Ng01-184O14.g_67_1246

seq1  GAATTCAGACCAGGGAGTCTTAGCTGGCAGGTCTACTTGATCTATAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCAGGGAGTCTTAGCTGGCAGGTCTACTTGATCTATAAGAA  50

seq1  ACCTGCACTAGTAAAAAGAAATGCTGACGAACACAGTTGACCATATAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCACTAGTAAAAAGAAATGCTGACGAACACAGTTGACCATATAATG  100

seq1  GAACTCTCAGAATATGAGATTTGTTGAGAGTCTCAGGAGTTCGAAAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTCAGAATATGAGATTTGTTGAGAGTCTCAGGAGTTCGAAAGGTT  150

seq1  CATTGCCTTGTTTATATATCAACTTTGACACAGGTTAGGAGTCATCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTGTTTATATATCAACTTTGACACAGGTTAGGAGTCATCTGGG  200

seq1  AAGAGAGAAACTTAATTGAGAAAATGTTTCCATCAAATTGCCTGTAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAACTTAATTGAGAAAATGTTTCCATCAAATTGCCTGTAGGCA  250

seq1  ATTATGTAGGTCATTTTTCTTGATTAATTATTGACATGTGAGGGCCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTAGGTCATTTTTCTTGATTAATTATTGACATGTGAGGGCCCAGC  300

seq1  CCATTGTAGGCGATGCCTTTCCTGGACAGGTGGTCCTGGGTTGTATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTAGGCGATGCCTTTCCTGGACAGGTGGTCCTGGGTTGTATGAGA  350

seq1  AAGAAGGCACAGAAAACCACAAAGGATAAGCCAGTAAGCAGCATTCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGCACAGAAAACCACAAAGGATAAGCCAGTAAGCAGCATTCCTCC  400

seq1  ATAGCTTCTGATTCAGTTTCTGCTTCCAGGTCCTGCTTTCAGTTCCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTCTGATTCAGTTTCTGCTTCCAGGTCCTGCTTTCAGTTCCTGCC  450

seq1  CTGATTTCCCTCATGAACAGAATAAGTGTCTGACCCAACAGCTATACGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCCTCATGAACAGAATAAGTGTCTGACCCAACAGCTATACGAT  500

seq1  GAAATAAATCCTCTCCTCCCTAAGGTGCTTTCTCTCACAGTAGTAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATCCTCTCCTCCCTAAGGTGCTTTCTCTCACAGTAGTAGAAAC  550

seq1  CCTACCTAAGACAAAAGGGCTATACTTAAAATTTCTAAGTCCTTGAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTAAGACAAAAGGGCTATACTTAAAATTTCTAAGTCCTTGAGTGC  600

seq1  TACAATGAAAGCCATGTTCCAAAAGATTAATGAAGTGAACAGTGGAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGAAAGCCATGTTCCAAAAGATTAATGAAGTGAACAGTGGAGATT  650

seq1  CAGGCGATGTCATAGCAATCCATGACTCATCTTCCAGCTACCTGCAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGATGTCATAGCAATCCATGACTCATCTTCCAGCTACCTGCAAAAC  700

seq1  CATCATAGAAGTGGGAAGATTAAGATTTCATGTCACTACTGTTGGGGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGAAGTGGGAAGATTAAGATTTCATGTCACTACTGTTGGGGTAG  750

seq1  ACAGGAACACCTTAGTGTCTTGGAAAACAATTAACTGCTTCATATTACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAACACCTTAGTGTCTTGGAAAACAATTAACTGCTTCATATTACCT  800

seq1  TCTGGGACC-ATCCTTGGGTCCCCCTAGATCTTAAAACAGAAGCCCGATT  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACCAATCCTTGGGTCCCCCTAGATCTTAAAACAGAAGCCCGATT  850

seq1  GTGTTCATTCATTCAATTCGTTTCCATTTCTAATAGAGAATTTTATCAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATTCATTCAATTCGTTTCCATTTCTAATAGAGAATTTTATCAGC  900

seq1  CAGCTTTTGTTTGGCAATCACGTCACGG-AGGGAACAAAAA--TATGGTG  946
      |||||||||||||||||||||||||||| ||||||||||||   ||||||
seq2  CAGCTTTTGTTTGGCAATCACGTCACGGAAGGGAACAAAAAATAATGGTG  950

seq1  C-TCACG-CACACACAACTATTAAAATGTTCC-ACATATTGCTG-TAAAC  992
      | ||||| |||||||||||||||||||||||| ||||  ||||| |||||
seq2  CTTCACGCCACACACAACTATTAAAATGTTCCAACATTATGCTGTTAAAC  1000

seq1  TCCG-AGTTTTAGCACAGCGTTTGCATTTGTTCATTTCACAACTAATTTT  1041
      |||| ||||||||||||||| ||||| ||| ||||||||||||||| |||
seq2  TCCGAAGTTTTAGCACAGCG-TTGCAATTG-TCATTTCACAACTAAATTT  1048

seq1  ACTTCTGTGACTTTATCG-ATGTTGGGAAGATCACTCTTCCTGCAGTGT-  1089
      || |||||||| |||||| |||||||||||||||||| | ||||| ||| 
seq2  AC-TCTGTGAC-TTATCGAATGTTGGGAAGATCACTCCTTCTGCA-TGTG  1095

seq1  GTGGTGTTGCTCCTGAGTGGGAATGATCTTCCTGCCTGACAAACATGTCT  1139
      |||||| |||||||||  || ||||||||  ||||||||  ||||||| |
seq2  GTGGTG-TGCTCCTGA-AGGAAATGATCT--CTGCCTGAACAACATGT-T  1140

seq1  TCCATTTCTTCCCTAACATTTTTGAACACATCT-CTCGTG  1178
        || ||||| ||  |||||| ||||||||||| ||||||
seq2  CTCAATTCTTTCCGTACATTTATGAACACATCTACTCGTG  1180