BAC Information

Click to search

BAC

Clone NameB6Ng01-185K01
Chromosome14 (Build37)
Map Location 62,874,826 - 63,037,808
singlet/doubletdoublet
Overlap geneDleu7, Rnaseh2b, Gucy1b2
Upstream geneSgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
Downstream geneLOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185K01.bB6Ng01-185K01.g
ACCGA010688GA010689
length1,094231
definitionB6Ng01-185K01.b B6Ng01-185K01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,874,826 - 62,875,912)(63,037,578 - 63,037,808)
sequence
gaattcttctcgggaggatttcctcagggtcaggacataggagctatgtt
ctgggggtggagaaagactgcatctcaagctgacagctacgtttgataat
gttcaagattctcccacatggtactgattttgaaagcatgaggagcagct
gagacttttccctgtgagaagccaggaaccgtcactggtgaaagtgaagc
ctcagctgtagggtgactcagaatactggaggtacagggatgactaccac
ggccatgggatgatcaccaaggaaagcagcagatgtggaatggagccagc
atgagcctatgaggtaagctgtgcgtgttgtggataacagaggccaaagg
ggagcactgcccaaccccttcgaaccccagaagaccatgagtcccagcca
tcagacatttgagctttttatgacattggattttggtttgctttgcttgt
aactgtgcccctgttcttttgtgaaaaggtagattgggaaatcctgaagt
cagggaagtagagagaggtacagggagaaagagtagcaatgggatgatgg
aaactttgaatgtgccttggctggggtcttcccacctcataactcaagaa
cagcctagggcatcacgtgtctcagtctgtgtcttttctgttctccaggg
tggtgattcttaagccatctcagtctgaggttatcgaagtcttctcaagg
aatgatgctagacagaagcatgttttaaaagaagaaagatgggaggtatc
agaaatagcaaaagctagaaggccgggagaatggccaggtgggataacaa
gatactcgctgctggccacccaaagaagtcttccgctaaatggaaagaat
ggagatctatctgttcagccagaagtcagacctgcgggtgcttcagctcc
tgctgaagcctaaggacttgtttgttatcctgtaacaaaatacctgagat
gaacataaaggagaatgggaggtcccactttcctaagaccccaccccttc
aaccataccaccagctgtcaagcagaatccaaattacttcagtggagaat
ttgcaggaacatttgtaaccataactttttgggtactttattga
aaggcaagctctcccaagcctggctttattgaccccgaggaccaggctat
tctaggttatgatgggctgcactttgtgctgtaagatctgtcaccacagc
acagacatctctctatccaaaatagatgtccaatgtagctagtagaacgt
tacctcttagttgtggcaatcaaaaatgtattcaggcattgtcaattgtc
cccagagtagagagatggtggaggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_62874826_62875912
seq2: B6Ng01-185K01.b_40_1133

seq1  GAATTCTTCTCGGGAGGATTTCCTCAGGGTCAGGACATAGGAGCTATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCGGGAGGATTTCCTCAGGGTCAGGACATAGGAGCTATGTT  50

seq1  CTGGGGGTGGAGAAAGACTGCATCTCAAGCTGACAGCTACGTTTGATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGTGGAGAAAGACTGCATCTCAAGCTGACAGCTACGTTTGATAAT  100

seq1  GTTCAAGATTCTCCCACATGGTACTGATTTTGAAAGCATGAGGAGCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGATTCTCCCACATGGTACTGATTTTGAAAGCATGAGGAGCAGCT  150

seq1  GAGACTTTTCCCTGTGAGAAGCCAGGAACCGTCACTGGTGAAAGTGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTTCCCTGTGAGAAGCCAGGAACCGTCACTGGTGAAAGTGAAGC  200

seq1  CTCAGCTGTAGGGTGACTCAGAATACTGGAGGTACAGGGATGACTACCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGTAGGGTGACTCAGAATACTGGAGGTACAGGGATGACTACCAC  250

seq1  GGCCATGGGATGATCACCAAGGAAAGCAGCAGATGTGGAATGGAGCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGGATGATCACCAAGGAAAGCAGCAGATGTGGAATGGAGCCAGC  300

seq1  ATGAGCCTATGAGGTAAGCTGTGCGTGTTGTGGATAACAGAGGCCAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCTATGAGGTAAGCTGTGCGTGTTGTGGATAACAGAGGCCAAAGG  350

seq1  GGAGCACTGCCCAACCCCTTCGAACCCCAGAAGACCATGAGTCCCAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACTGCCCAACCCCTTCGAACCCCAGAAGACCATGAGTCCCAGCCA  400

seq1  TCAGACATTTGAGCTTTTTATGACATTGGATTTTGGTTTGCTTTGCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATTTGAGCTTTTTATGACATTGGATTTTGGTTTGCTTTGCTTGT  450

seq1  AACTGTGCCCCTGTTCTTTTGTGAAAAGGTAGATTGGGAAATCCTGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGCCCCTGTTCTTTTGTGAAAAGGTAGATTGGGAAATCCTGAAGT  500

seq1  CAGGGAAGTAGAGAGAGGTACAGGGAGAAAGAGTAGCAATGGGATGATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGTAGAGAGAGGTACAGGGAGAAAGAGTAGCAATGGGATGATGG  550

seq1  AAACTTTGAATGTGCCTTGGCTGGGGTCTTCCCACCTCATAACTCAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGAATGTGCCTTGGCTGGGGTCTTCCCACCTCATAACTCAAGAA  600

seq1  CAGCCTAGGGCATCACGTGTCTCAGTCTGTGTCTTTTCTGTTCTCCAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGGGCATCACGTGTCTCAGTCTGTGTCTTTTCTGTTCTCCAGGG  650

seq1  TGGTGATTCTTAAGCCATCTCAGTCTGAGGTTATCGAAGTCTTCTCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATTCTTAAGCCATCTCAGTCTGAGGTTATCGAAGTCTTCTCAAGG  700

seq1  AATGATGCTAGACAGAAGCATGTTTTAAAAGAAGAAAGATGGGAGGTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCTAGACAGAAGCATGTTTTAAAAGAAGAAAGATGGGAGGTATC  750

seq1  AGAAATAGCAAAAGCTAGAAGGCCGGGAGAATGGCCAGGTGGGATAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGCAAAAGCTAGAAGGCCGGGAGAATGGCCAGGTGGGATAACAA  800

seq1  GATACTCGCTGCTGGCCACCCAAAGAAGTCTTCCGCTAAATGGAAAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCGCTGCTGGCCACCCAAAGAAGTCTTCCGCTAAATGGAAAGAAT  850

seq1  GGAGATCTATCTGTTCAGCCAGAAGTCAGACCTGCGGGTGCTTCAGCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCTATCTGTTCAGCCAGAAGTCAGACCTGCGGGTGCTTCAGCTCC  900

seq1  TGCTGAAGCCTAAGGACTTGTTTGTTATCCTGTAACAAAATACCTGAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGCCTAAGGACTTGTTTGTTATCCTGTAACAAAATACCTGAGAT  950

seq1  GAACATAAAAGGAGAAT-GGAGGTCCCACTTCCTAAAGACCCCACCCCTT  999
      |||||| |||||||||| ||||||||||||| |  |||||||||||||||
seq2  GAACAT-AAAGGAGAATGGGAGGTCCCACTTTCCTAAGACCCCACCCCTT  999

seq1  CCAACCATACCACCAGCTGTCAAGCAG-ATCCAAATTAC-TCAGT-GAGA  1046
       |||||||||||||||||||||||||| ||||||||||| ||||| ||||
seq2  -CAACCATACCACCAGCTGTCAAGCAGAATCCAAATTACTTCAGTGGAGA  1048

seq1  A-TTGCAG--ACATTTGTAACCATA--CTTTTGGGTACTTTATTGA  1087
      | ||||||  |||||||||||||||   ||||||||||||||||||
seq2  ATTTGCAGGAACATTTGTAACCATAACTTTTTGGGTACTTTATTGA  1094

seq1: chr14_63037578_63037808
seq2: B6Ng01-185K01.g_69_299 (reverse)

seq1  CCCCCCCCCTCCACCATCTCTCTACTCTGGGGACAATTGACAATGCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCTCCACCATCTCTCTACTCTGGGGACAATTGACAATGCCTGA  50

seq1  ATACATTTTTGATTGCCACAACTAAGAGGTAACGTTCTACTAGCTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTTGATTGCCACAACTAAGAGGTAACGTTCTACTAGCTACATT  100

seq1  GGACATCTATTTTGGATAGAGAGATGTCTGTGCTGTGGTGACAGATCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCTATTTTGGATAGAGAGATGTCTGTGCTGTGGTGACAGATCTTA  150

seq1  CAGCACAAAGTGCAGCCCATCATAACCTAGAATAGCCTGGTCCTCGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAAAGTGCAGCCCATCATAACCTAGAATAGCCTGGTCCTCGGGGT  200

seq1  CAATAAAGCCAGGCTTGGGAGAGCTTGCCTT  231
      |||||||||||||||||||||||||||||||
seq2  CAATAAAGCCAGGCTTGGGAGAGCTTGCCTT  231