BAC Information

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BAC

Clone NameB6Ng01-185M05
Chromosome14 (Build37)
Map Location 97,743,458 - 97,862,338
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185M05.bB6Ng01-185M05.g
ACCGA010788GA010789
length1,204389
definitionB6Ng01-185M05.b B6Ng01-185M05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,743,458 - 97,744,753)(97,861,944 - 97,862,338)
sequence
gaattccacacatatgtacaacacaatataatcacattcaactccagtgt
tcctcaaccaaaccctccatggtctcatcaacatgccttactctgaaatt
ccgaatatcatgatttttttggcttttatttggttgtttgttcgagtttt
gttgctggtattattgttttgtttgtttgtttgtttgtttgtgataactc
aaaaagttcaattaccattacccacttgtctatggaaggtgattcttttg
acctaaggcacttgaggtgtatagaatttctccacagtcttatatgagaa
tagcaactgaattataataagaaatgcaaatgtctaatactcttctaaat
ataagctgaattgctataaaacttgaacgttaaaacatcttgactacaac
caaataaatcagttcttaatgtcacttgtttttcagaacatgtacattgc
ttaagtcatcttcatatcaataaaagtaaactgtggtgtagctaatatca
aaagtgcacagagcatactctgccaattacttaatctcattaaaaaaata
gtactctgtatttgacacctgtcaaaaacttagttgacagacttcttctt
tcaatctactacaccttctaagaatcaaatcaatgtgtccaatttattat
tcataatttgcatagcatgcttatggctttattctatatttatcttctat
tttctcatcagagattttcagtgtttaccagaagtgaaagtggaaattat
attagtcatttttttctgtagtttatttaatacacttattaattcataca
aaactagacacaaaatagaaaactagcttaactttaaatcagtgattaaa
taaagaaatattttggctataaatatttagtaatatgtgtgtgaatttgc
attatagtccacctgcaagaaaaaactcactcactatttaaaatatattg
tttagcaatttcttctagagtgaaacattccatcttccaagggaaagcac
attttacagaacacacaactcaaaattacttcatgggaatcatggaattg
aataagaattcactaggccctatcactctaaatggttgtggccttaggtt
aaatattcaactgcttacaagagaatcatgaactagaagcaattcataga
aggcattcctacggatcgaaatcaggctacaattacatcatggaagggga
gaat

caggcttgagtcaccattcccaatatctaaggtgtctcttgaaatatttt
tattcttgtagatcttgtgtataatcttctatatgtaccaaagcaaattt
ctgtgatcttcaattatttgcgttgctggaaaataggctaaataacttta
aaaacagatgaatacttgttttctcacagtcctagagcagctatggtttt
ctggaaagaaatcctttctgccccaaagatggtcagttggaggagagaaa
gtcacattctgggaagacacacggtaaccaagctaagttaagctcaccct
caagagactggaggccccagggagtttggaggtcaggtgggatgtgggtg
gagatatcctcatggagttaggggatgtggaggaggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97743458_97744753
seq2: B6Ng01-185M05.b_37_1240

seq1  GAATTCCACACATATGTACAACACAATATAATCACATTCAACTCCAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACATATGTACAACACAATATAATCACATTCAACTCCAGTGT  50

seq1  TCCTCAACCAAACCCTCCATGGTCTCATCAACATGCCTTACTCTGAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAACCAAACCCTCCATGGTCTCATCAACATGCCTTACTCTGAAATT  100

seq1  CCGAATATCATGATTTTTTTGGCTTTTATTTGGTTGTTTGTTCGAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATATCATGATTTTTTTGGCTTTTATTTGGTTGTTTGTTCGAGTTTT  150

seq1  GTTGCTGGTATTATTGTTTTGTTTGTTTGTTTGTTTGTTTGTGATAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGGTATTATTGTTTTGTTTGTTTGTTTGTTTGTTTGTGATAACTC  200

seq1  AAAAAGTTCAATTACCATTACCCACTTGTCTATGGAAGGTGATTCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTCAATTACCATTACCCACTTGTCTATGGAAGGTGATTCTTTTG  250

seq1  ACCTAAGGCACTTGAGGTGTATAGAATTTCTCCACAGTCTTATATGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGGCACTTGAGGTGTATAGAATTTCTCCACAGTCTTATATGAGAA  300

seq1  TAGCAACTGAATTATAATAAGAAATGCAAATGTCTAATACTCTTCTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTGAATTATAATAAGAAATGCAAATGTCTAATACTCTTCTAAAT  350

seq1  ATAAGCTGAATTGCTATAAAACTTGAACGTTAAAACATCTTGACTACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTGAATTGCTATAAAACTTGAACGTTAAAACATCTTGACTACAAC  400

seq1  CAAATAAATCAGTTCTTAATGTCACTTGTTTTTCAGAACATGTACATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATCAGTTCTTAATGTCACTTGTTTTTCAGAACATGTACATTGC  450

seq1  TTAAGTCATCTTCATATCAATAAAAGTAAACTGTGGTGTAGCTAATATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCATCTTCATATCAATAAAAGTAAACTGTGGTGTAGCTAATATCA  500

seq1  AAAGTGCACAGAGCATACTCTGCCAATTACTTAATCTCATTAAAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCACAGAGCATACTCTGCCAATTACTTAATCTCATTAAAAAAATA  550

seq1  GTACTCTGTATTTGACACCTGTCAAAAACTTAGTTGACAGACTTCTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTGTATTTGACACCTGTCAAAAACTTAGTTGACAGACTTCTTCTT  600

seq1  TCAATCTACTACACCTTCTAAGAATCAAATCAATGTGTCCAATTTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTACTACACCTTCTAAGAATCAAATCAATGTGTCCAATTTATTAT  650

seq1  TCATAATTTGCATAGCATGCTTATGGCTTTATTCTATATTTATCTTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTTGCATAGCATGCTTATGGCTTTATTCTATATTTATCTTCTAT  700

seq1  TTTCTCATCAGAGATTTTCAGTGTTTACCAGAAGTGAAAGTGGAAATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATCAGAGATTTTCAGTGTTTACCAGAAGTGAAAGTGGAAATTAT  750

seq1  ATTAGTCATTTTTTTCTGTAGTTTATTTAATACACTTATTAATTCATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCATTTTTTTCTGTAGTTTATTTAATACACTTATTAATTCATACA  800

seq1  AAACTAGACACAAAATAGAAAACTAGCTTAACTTTAAATCAGTGATTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGACACAAAATAGAAAACTAGCTTAACTTTAAATCAGTGATTAAA  850

seq1  TAAAGAAATATTTTGGCTATAAATATTTAGTAATATGTGTGTGAATTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATATTTTGGCTATAAATATTTAGTAATATGTGTGTGAATTTGC  900

seq1  ATTATAGTCCACCTGCAAGAAAAAACTCACTCACTATTTAAAATATATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTCCACCTGCAAGAAAAAACTCACTCACTATTTAAAATATATTG  950

seq1  TTTAGCAATTTCTTCTAGAGTGAAACATTCCATCTTCCAA-GGAAAGCAC  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTAGCAATTTCTTCTAGAGTGAAACATTCCATCTTCCAAGGGAAAGCAC  1000

seq1  ATTTTACAGAACACACAACTCAAAATTACTTCATGGAATTCCATGAAATT  1049
      |||||||||||||||||||||||||||||||||||| | | |||| ||||
seq2  ATTTTACAGAACACACAACTCAAAATTACTTCATGGGAAT-CATGGAATT  1049

seq1  G-ATAAG-ATTCACTA-GCCCTATCACTCCTAATGGTTGTTGGCTTAG--  1094
      | ||||| |||||||| ||||||||||||  ||||||||| | |||||  
seq2  GAATAAGAATTCACTAGGCCCTATCACTCTAAATGGTTGTGGCCTTAGGT  1099

seq1  TTAATATTCAACTGCTACAAAGAGAAATCATG-ACTAGGAAACCATTTCA  1143
      | ||||||||||||||   ||||| ||||||| |||||  || || ||||
seq2  TAAATATTCAACTGCTTACAAGAG-AATCATGAACTAG--AAGCAATTCA  1146

seq1  TTAGAA-GCATTCTTACAGATTCAGAAAATCAGTCTACTAT--CATCAT-  1189
       ||||| |||||| ||| |||     ||||||| |||| ||  |||||| 
seq2  -TAGAAGGCATTCCTACGGAT---CGAAATCAGGCTACAATTACATCATG  1192

seq1  GAAGGGGAGTATGGTTGTAGGCATGGTTCTGGAGAAGTAGTTGAGAGTTG  1239
      ||||||||| ||                                      
seq2  GAAGGGGAGAAT--------------------------------------  1204

seq1  CATATCAATCCACAGAGAACAACTAGAAAGAGGAAGAGGGAAAGGGAAGG  1289
                                                        
seq2  --------------------------------------------------  1204

seq1  GGAGAAT  1296
             
seq2  -------  1204


seq1: chr14_97861944_97862338
seq2: B6Ng01-185M05.g_63_457 (reverse)

seq1  ATACCTCCTCCACATCCCCTAACTCCATGAGGATATCTCCACCCACATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCCTCCACATCCCCTAACTCCATGAGGATATCTCCACCCACATCC  50

seq1  CACCTGACCTCCAAACTCCCTGGGGCCTCCAGTCTCTTGAGGGTGAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGACCTCCAAACTCCCTGGGGCCTCCAGTCTCTTGAGGGTGAGCTT  100

seq1  AACTTAGCTTGGTTACCGTGTGTCTTCCCAGAATGTGACTTTCTCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGCTTGGTTACCGTGTGTCTTCCCAGAATGTGACTTTCTCTCCTC  150

seq1  CAACTGACCATCTTTGGGGCAGAAAGGATTTCTTTCCAGAAAACCATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGACCATCTTTGGGGCAGAAAGGATTTCTTTCCAGAAAACCATAGC  200

seq1  TGCTCTAGGACTGTGAGAAAACAAGTATTCATCTGTTTTTAAAGTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTAGGACTGTGAGAAAACAAGTATTCATCTGTTTTTAAAGTTATTT  250

seq1  AGCCTATTTTCCAGCAACGCAAATAATTGAAGATCACAGAAATTTGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATTTTCCAGCAACGCAAATAATTGAAGATCACAGAAATTTGCTTT  300

seq1  GGTACATATAGAAGATTATACACAAGATCTACAAGAATAAAAATATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATATAGAAGATTATACACAAGATCTACAAGAATAAAAATATTTCA  350

seq1  AGAGACACCTTAGATATTGGGAATGGTGACTCAAGCCTGGAATTC  395
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACCTTAGATATTGGGAATGGTGACTCAAGCCTGGAATTC  395


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