BAC Information

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BAC

Clone NameB6Ng01-185O23
Chromosome14 (Build37)
Map Location 105,471,056 - 105,472,131
singlet/doubletsinglet
Overlap genenone
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420
Downstream geneRbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185O23.bB6Ng01-185O23.g
ACCGA010913GA010914
length1,0981,146
definitionB6Ng01-185O23.b B6Ng01-185O23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttattaactgtgtgagtgccctcatttttctcactcagtagc
agaatccacaacttaaggatgccttggctctctggaagtttcttatttac
ctaggattaactgttcagcctagcaaaggtgcagctgaatagaagagatc
aattgaagagaaaggcgtgagtggcagagagaaactcacaaggaaagcct
tttgcattggaaatttggtttgaaaaattcaaggtgtttagttagtcagc
aaaacactgatcttagtacttgctaagagccatgtcctgtgacagataat
agaaagacaaagatatcaaaagctctgttctttaagaattactagagagg
acattccttcaagcagatgataaataaacatggtaggttagggaccgata
cggtagccaaccatgagtctgagagcttaaataactgttgtagaaatatt
cttgactcctgggttatacctgttaaatgtagagtccaagttgcacttgc
tttcattgtattctgggagaaaaataaatccatatacattgaatgttttt
ggtcaatgtggacatcttaaaacagtcacattgttctcttaattgtaaaa
caggcaaacgttttcatcacagaagtttccataaagctgggaatcagttt
gtactgcctcacaggaacaatgtttactcttaagaacaccttgcagtgag
tcttttatttagcaaaagacccttttgttgtaggaataaggttactgcat
aagtgtgggctttcttagatttgaataacacaaaccatagtgaacagttc
cccagacaacatgcattgcctccttgtgacctggctccctgtgctcccac
aaatgacttaccagcaggataagttcctagatcctgaacctcttcaagag
cctggtctctctcaaacctccagcctcaggtttaagtgacaggactatta
gagctttgggcctgtctggtcccttgagtgactaaacttagaagcagaca
tccctcccttcgtggcactctgatcatgttgccctgtgtaacataaagcc
caggcatcaattcacctcttccaaggcctgggtagaatttctggggct
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagcggggagag
agagtaggaacaaagaggaaatatggtacacaaaataagtatacaggcct
ttccaagggtcttgaacccgaggaaaagttaaggttaggtaggaatacct
ggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaa
ttagcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggct
cggggagccagctcttggtagctctgaatcagatgatgaattctcctctg
aagaaacagactgggaggaagaagcagctcattatgagaaaaaagggtac
cagccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctgg
cgaaggccagtttgctgattggcctcagggcagtcggcttcaaggtccgc
cctatgcggagtccccgccctgcgtagtgcgtcagccctgcgcagagagg
cagtgcgcagagaggcagtgcgcagactcattcattcccagagaggaaca
aaggaaaatacaacaggcatttccggtctttgaaggagccgagggtgggc
gtgtccacgctccggtagaatacttacaaattaaagaaattgccgagtcg
gtccgtaaatacggaaccaatgctaattttatcttgggtgcagttagaca
ggctcgccggcatgggcactaactccctgccgactggcaaacggttgtaa
aagccgctctccctagttatgggcaaatattatgggaatggagagctctt
tggcatgaactgcacaagcgcagccgagcaacgcagctgctttgactcag
agcagaggagattgacttgacttgtaccggttcagggcttattctgctga
tcacaactaccatggggggaagcttaatgtccaaggtttccactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105471056_105472131
seq2: B6Ng01-185O23.b_46_1143

seq1  GAATTCATTTATTAACTGTGTGAGTGCCCTCATTTTTCTCACTCAGTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATTAACTGTGTGAGTGCCCTCATTTTTCTCACTCAGTAGC  50

seq1  AGAATCCACAACTTAAGGATGCCTTGGCTCTCTGGAAGTTTCTTATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCACAACTTAAGGATGCCTTGGCTCTCTGGAAGTTTCTTATTTAC  100

seq1  CTAGGATTAACTGTTCAGCCTAGCAAAGGTGCAGCTGAATAGAAGAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATTAACTGTTCAGCCTAGCAAAGGTGCAGCTGAATAGAAGAGATC  150

seq1  AATTGAAGAGAAAGGCGTGAGTGGCAGAGAGAAACTCACAAGGAAAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGAGAAAGGCGTGAGTGGCAGAGAGAAACTCACAAGGAAAGCCT  200

seq1  TTTGCATTGGAAATTTGGTTTGAAAAATTCAAGGTGTTTAGTTAGTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTGGAAATTTGGTTTGAAAAATTCAAGGTGTTTAGTTAGTCAGC  250

seq1  AAAACACTGATCTTAGTACTTGCTAAGAGCCATGTCCTGTGACAGATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGATCTTAGTACTTGCTAAGAGCCATGTCCTGTGACAGATAAT  300

seq1  AGAAAGACAAAGATATCAAAAGCTCTGTTCTTTAAGAATTACTAGAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACAAAGATATCAAAAGCTCTGTTCTTTAAGAATTACTAGAGAGG  350

seq1  ACATTCCTTCAAGCAGATGATAAATAAACATGGTAGGTTAGGGACCGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTTCAAGCAGATGATAAATAAACATGGTAGGTTAGGGACCGATA  400

seq1  CGGTAGCCAACCATGAGTCTGAGAGCTTAAATAACTGTTGTAGAAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGCCAACCATGAGTCTGAGAGCTTAAATAACTGTTGTAGAAATATT  450

seq1  CTTGACTCCTGGGTTATACCTGTTAAATGTAGAGTCCAAGTTGCACTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTCCTGGGTTATACCTGTTAAATGTAGAGTCCAAGTTGCACTTGC  500

seq1  TTTCATTGTATTCTGGGAGAAAAATAAATCCATATACATTGAATGTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGTATTCTGGGAGAAAAATAAATCCATATACATTGAATGTTTTT  550

seq1  GGTCAATGTGGACATCTTAAAACAGTCACATTGTTCTCTTAATTGTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATGTGGACATCTTAAAACAGTCACATTGTTCTCTTAATTGTAAAA  600

seq1  CAGGCAAACGTTTTCATCACAGAAGTTTCCATAAAGCTGGGAATCAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAACGTTTTCATCACAGAAGTTTCCATAAAGCTGGGAATCAGTTT  650

seq1  GTACTGCCTCACAGGAACAATGTTTACTCTTAAGAACACCTTGCAGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCCTCACAGGAACAATGTTTACTCTTAAGAACACCTTGCAGTGAG  700

seq1  TCTTTTATTTAGCAAAAGACCCTTTTGTTGTAGGAATAAGGTTACTGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTTAGCAAAAGACCCTTTTGTTGTAGGAATAAGGTTACTGCAT  750

seq1  AAGTGTGGGCTTTCTTAGATTTGAATAACACAAACCATAGTGAACAG-TC  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGTGTGGGCTTTCTTAGATTTGAATAACACAAACCATAGTGAACAGTTC  800

seq1  CCCAGACAACATGCATTGCCTCCTTGTGACCTGGCTCCCTGTGCTCCCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACAACATGCATTGCCTCCTTGTGACCTGGCTCCCTGTGCTCCCAC  850

seq1  AAATGACTTACCAGCAGGATAAG-TCCTAGATCCTGAACCTC-TCAAGAG  897
      ||||||||||||||||||||||| |||||||||||||||||| |||||||
seq2  AAATGACTTACCAGCAGGATAAGTTCCTAGATCCTGAACCTCTTCAAGAG  900

seq1  CCTGGTCTCTCTC-AACCTCCAGCCTCAGG-TTAAGTGACAGGACTA-TA  944
      ||||||||||||| |||||||||||||||| |||||||||||||||| ||
seq2  CCTGGTCTCTCTCAAACCTCCAGCCTCAGGTTTAAGTGACAGGACTATTA  950

seq1  GAGCTTT-GGCCTGTCTGGT-CCTTGAGTGACT-AACTTAG-AGCAGACA  990
      ||||||| |||||||||||| |||||||||||| ||||||| ||||||||
seq2  GAGCTTTGGGCCTGTCTGGTCCCTTGAGTGACTAAACTTAGAAGCAGACA  1000

seq1  T-CCTCCC-TCGTGGCACTCTGATCATGTTG-CCTGTGTAACATAA--GC  1035
      | |||||| |||||||||||||||||||||| ||||||||||||||   |
seq2  TCCCTCCCTTCGTGGCACTCTGATCATGTTGCCCTGTGTAACATAAAGCC  1050

seq1  CAGGCATCAA-TCA-CTC-TCCAAGGC--TGGTAGA--TTCTGGGGCT  1076
      |||||||||| ||| ||| ||||||||   ||||||  ||||||||||
seq2  CAGGCATCAATTCACCTCTTCCAAGGCCTGGGTAGAATTTCTGGGGCT  1098