BAC Information

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BAC

Clone NameB6Ng01-186A18
Chromosome14 (Build37)
Map Location 14,873,435 - 14,874,201
singlet/doubletsinglet
Overlap geneAtxn7
Upstream geneEG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7
Downstream genePsmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186A18.bB6Ng01-186A18.g
ACCGA010996GA010997
length990980
definitionB6Ng01-186A18.b B6Ng01-186A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctataacccattttttaatggggttatttgaat
ttctggagttcagctccttgagctctttgtatatattggacattagtccc
ctatcagttttaggattggtaaagatcctttcccaatctgttggtggcct
tttgtcttattgacagtatctttttccctaaataagctttgcaattttat
gaggtcccatttatctattcttgatcttacagcacaggccattgctgttc
tgtttaggaatgtttccctgtgcccatatctttaaaggttttccccactt
tctcctctataaatttcagtgtctctggttttatgtggagttctttgatc
cacttattcttgagcgttgtacaaggagataagaatgcatcaattcacat
tcttctacgtgataactgccagttgtgccagcaccatttgttgaacatgc
tgtcttttttcctctggatggttttagctcccttgtcaaagatcaggtta
ccataggggtgtgtgttcatttctggatattcacttctattccattgatc
tacctgtctgtctctgtaccatgcagtttttaatcacaattgctctgtag
tacagcttggggtcaggcatggtgattccaccagaggttcttttgttgtt
gacaatattttttgctatcttaggcaatttgttattccagatgaatttgc
aaattgccctttctaagttagtgaagaatagagttggaattttgctgggg
attgcatttgaatctgtagattgctttcggcaggatagccattttttact
atattaattcctgctaatccatgagcatgggagatcttttccatcttgag
tacttcttctatttctttctcagagacttgaagtttcaatgtcaacagat
cttttactttcattagttagaagttaaaatcaaggtaatttaaattattt
gtgacttattatgaaagggaattgttccctaatttctacg
gaattcactctgtagaccaggctggccttgaactcagaaatccacctgcc
tctgcctcccatgtggtaggattaaaggcgtgtgccaccaccacccgact
gaattttgttcttttttaaagataactgatatcttctatggtagctctgt
agatgaggctagctttgatctcacagagagagctcttgctgtctctgctt
ttggaatgatgggtttaaaagcatgtgccatcactgctcagccattgcac
cacattttctttgtttagtcctccatagccattgtgaatagtactgtaat
cagcatggcttcttggcattgctgttctgtcctttgagtgtacaccagca
gtgaagtagctagatcatgcagtgcaggggctgtcacctaagtgtcaaga
cctgttagagggcagacattaaacaaacttttcatgggttgtctacttca
tttggaaagcacagatattacattacaattcataacagtaagaaaattac
acttaggaagtagcaacataaataatggggctggagatatggctcaatgg
ttaagagcactgactgctcttccaaaggtcctgagttcaattcccagcaa
ccacatggtggctcacaaccatctgtaatagtatcttgatgccctcttct
ggtgtctctgaagacacctatggtgtactcacattaaataaataaataat
taaaaaaaaaaataattctatggttggggggtctccacgacatgaagaac
tatgttagtgggtcacagaattaagaaagttgagaaccactgatggagtg
gttctgtttttagatttttataatatttgtaatggctgtactaatttaga
tccccacccagtgtatagtttttgaccttcctctgtattcttgtcagcat
ttttgttctgtcattgttggggttttattatggccatattatgtgggatg
tatcttctgcggcttgattgcaatttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14873435_14874201
seq2: B6Ng01-186A18.g_65_831

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCCATGTGGTAGGATTAAAGGCGTGTGCCACCACCACCCGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCATGTGGTAGGATTAAAGGCGTGTGCCACCACCACCCGACT  100

seq1  GAATTTTGTTCTTTTTTAAAGATAACTGATATCTTCTATGGTAGCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGTTCTTTTTTAAAGATAACTGATATCTTCTATGGTAGCTCTGT  150

seq1  AGATGAGGCTAGCTTTGATCTCACAGAGAGAGCTCTTGCTGTCTCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGCTAGCTTTGATCTCACAGAGAGAGCTCTTGCTGTCTCTGCTT  200

seq1  TTGGAATGATGGGTTTAAAAGCATGTGCCATCACTGCTCAGCCATTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGATGGGTTTAAAAGCATGTGCCATCACTGCTCAGCCATTGCAC  250

seq1  CACATTTTCTTTGTTTAGTCCTCCATAGCCATTGTGAATAGTACTGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTCTTTGTTTAGTCCTCCATAGCCATTGTGAATAGTACTGTAAT  300

seq1  CAGCATGGCTTCTTGGCATTGCTGTTCTGTCCTTTGAGTGTACACCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGCTTCTTGGCATTGCTGTTCTGTCCTTTGAGTGTACACCAGCA  350

seq1  GTGAAGTAGCTAGATCATGCAGTGCAGGGGCTGTCACCTAAGTGTCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTAGCTAGATCATGCAGTGCAGGGGCTGTCACCTAAGTGTCAAGA  400

seq1  CCTGTTAGAGGGCAGACATTAAACAAACTTTTCATGGGTTGTCTACTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAGAGGGCAGACATTAAACAAACTTTTCATGGGTTGTCTACTTCA  450

seq1  TTTGGAAAGCACAGATATTACATTACAATTCATAACAGTAAGAAAATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAGCACAGATATTACATTACAATTCATAACAGTAAGAAAATTAC  500

seq1  ACTTAGGAAGTAGCAACATAAATAATGGGGCTGGAGATATGGCTCAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGAAGTAGCAACATAAATAATGGGGCTGGAGATATGGCTCAATGG  550

seq1  TTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAA  600

seq1  CCACATGGTGGCTCACAACCATCTGTAATAGTATCTTGATGCCCTCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGTGGCTCACAACCATCTGTAATAGTATCTTGATGCCCTCTTCT  650

seq1  GGTGTCTCTGAAGACACCTATGGTGTACTCACATTAAATAAATAAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTCTGAAGACACCTATGGTGTACTCACATTAAATAAATAAATAAT  700

seq1  TAAAAAAAAAAATAATTCTATGGTTGGGGGGTCTCCACGACATGAAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAATAATTCTATGGTTGGGGGGTCTCCACGACATGAAGAAC  750

seq1  TATGTTAGTGGGTCACA  767
      |||||||||||||||||
seq2  TATGTTAGTGGGTCACA  767