BAC Information

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BAC

Clone NameB6Ng01-186F20
Chromosome14 (Build37)
Map Location 68,296,499 - 68,442,102
singlet/doubletdoublet
Overlap geneCdca2, Kctd9, Gnrh1, Dock5
Upstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046, LOC100043056
Downstream geneNefl, Nefm, LOC100043072, Adam7, Adamdec1, Adam28, LOC641033, LOC100043082
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186F20.bB6Ng01-186F20.g
ACCGA011229GA011230
length3811,107
definitionB6Ng01-186F20.b B6Ng01-186F20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,441,722 - 68,442,102)(68,296,499 - 68,297,605)
sequence
accagcgttgcctacttaattctctaatatctgcaggagacaaagggagt
catactctgaggaagttgatgaatattcatacgaactaattgatgtgact
tgtggacagccggccacataacatttgaaaaactctagaaagccaacttg
ccacgtagtgcacgagaacaggttttttttgttgttgttgttgttgttgt
ttttgtttttttgggtttttttttgcaagtaattggatcttttctcactt
tcaggaagttaagggacaatggtagttttctacacacacattacctgaga
atgagggtgttttaatgaatgctaggaatggatgaataaacatttccata
aaaggaggctgttgggggagtgggtgggtag
gaattcttgagtatttaaagacatagcagctgagtcgtacagcagtcatg
tcttccaataattcccatataactgtagacagagccatgggccacaatct
caaagagcagcctttgttcctcctttctgactaaataagcttcgttctct
gggtaagaacaccacatgtagcttggtgcatgtattcatcacatgtagct
ttgtgcatgtacttcctaggtgagaaaaccactaggaagggttgagatga
acaaggaacatgttctacagcagtggttttcagccttcctaacgctacga
tgctttaatgtagttcctcatggcttggtgaccaccccccaaccataaaa
ttatttttgttgctacttcttaactgaattgtgctactgttaagaatcat
aatgtaaatatctgtgttttctgatggtctgaagtggcccctgtgaaagg
gtcattcgactcccaagacggctgcaattcacgggtcagcaaccattgat
ccagaggaactcagttcttatgacttgaaatcaatgctgttagattctgt
ctctattatctaagatgttattagctcatcatcaagtgaatataaaaagt
gttttaaatgaaatcaaaggtgaaagatacatataaaaaatagctaagcc
taaagtttttaaaaaaatcagtttcaatctgaaaacacatttatgattag
agcaggtaaatagtatgtagagtcagattcatacaggtcaggatttacaa
tgaatatagcagctaggctcttttataacttggtacacacaaacacagtt
atatatatttctagcatagtaggaaaaaaatggtgttggggagagaaagt
tgtagaaagagatgggaaaaaaattggaaattcttcaaaccttcttttcg
ggtgacaaggtagttatagattaaaaaacaggatagaagtatttccctgc
gatggaaggcagtaacatttttaatattttaagtagaatcagccagatta
aacagggtaggaaatagcagacttgccattcaagcacccacatgaggcag
agatggaaatgagccttgaaatgagttatttctgagtagctgttaaactc
cttgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68441722_68442102
seq2: B6Ng01-186F20.b_51_431 (reverse)

seq1  CTACCCACCCACTCCCCCAACAGCCTCCTTTTATGGAAATGTTTATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACCCACTCCCCCAACAGCCTCCTTTTATGGAAATGTTTATTCAT  50

seq1  CCATTCCTAGCATTCATTAAAACACCCTCATTCTCAGGTAATGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTAGCATTCATTAAAACACCCTCATTCTCAGGTAATGTGTGTGT  100

seq1  AGAAAACTACCATTGTCCCTTAACTTCCTGAAAGTGAGAAAAGATCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTACCATTGTCCCTTAACTTCCTGAAAGTGAGAAAAGATCCAAT  150

seq1  TACTTGCAAAAAAAAACCCAAAAAAACAAAAACAACAACAACAACAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCAAAAAAAAACCCAAAAAAACAAAAACAACAACAACAACAACAA  200

seq1  CAAAAAAAACCTGTTCTCGTGCACTACGTGGCAAGTTGGCTTTCTAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAACCTGTTCTCGTGCACTACGTGGCAAGTTGGCTTTCTAGAGT  250

seq1  TTTTCAAATGTTATGTGGCCGGCTGTCCACAAGTCACATCAATTAGTTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAATGTTATGTGGCCGGCTGTCCACAAGTCACATCAATTAGTTCG  300

seq1  TATGAATATTCATCAACTTCCTCAGAGTATGACTCCCTTTGTCTCCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATTCATCAACTTCCTCAGAGTATGACTCCCTTTGTCTCCTGCA  350

seq1  GATATTAGAGAATTAAGTAGGCAACGCTGGT  381
      |||||||||||||||||||||||||||||||
seq2  GATATTAGAGAATTAAGTAGGCAACGCTGGT  381

seq1: chr14_68296499_68297605
seq2: B6Ng01-186F20.g_60_1166

seq1  GAATTCTTGAGTATTTAAAGACATAGCAGCTGAGTCGTACAGCAGTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGTATTTAAAGACATAGCAGCTGAGTCGTACAGCAGTCATG  50

seq1  TCTTCCAATAATTCCCATATAACTGTAGACAGAGCCATGGGCCACAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAATAATTCCCATATAACTGTAGACAGAGCCATGGGCCACAATCT  100

seq1  CAAAGAGCAGCCTTTGTTCCTCCTTTCTGACTAAATAAGCTTCGTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCAGCCTTTGTTCCTCCTTTCTGACTAAATAAGCTTCGTTCTCT  150

seq1  GGGTAAGAACACCACATGTAGCTTGGTGCATGTATTCATCACATGTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGAACACCACATGTAGCTTGGTGCATGTATTCATCACATGTAGCT  200

seq1  TTGTGCATGTACTTCCTAGGTGAGAAAACCACTAGGAAGGGTTGAGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATGTACTTCCTAGGTGAGAAAACCACTAGGAAGGGTTGAGATGA  250

seq1  ACAAGGAACATGTTCTACAGCAGTGGTTTTCAGCCTTCCTAACGCTACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAACATGTTCTACAGCAGTGGTTTTCAGCCTTCCTAACGCTACGA  300

seq1  TGCTTTAATGTAGTTCCTCATGGCTTGGTGACCACCCCCCAACCATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAATGTAGTTCCTCATGGCTTGGTGACCACCCCCCAACCATAAAA  350

seq1  TTATTTTTGTTGCTACTTCTTAACTGAATTGTGCTACTGTTAAGAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGTTGCTACTTCTTAACTGAATTGTGCTACTGTTAAGAATCAT  400

seq1  AATGTAAATATCTGTGTTTTCTGATGGTCTGAAGTGGCCCCTGTGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATATCTGTGTTTTCTGATGGTCTGAAGTGGCCCCTGTGAAAGG  450

seq1  GTCATTCGACTCCCAAGACGGCTGCAATTCACGGGTCAGCAACCATTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCGACTCCCAAGACGGCTGCAATTCACGGGTCAGCAACCATTGAT  500

seq1  CCAGAGGAACTCAGTTCTTATGACTTGAAATCAATGCTGTTAGATTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGAACTCAGTTCTTATGACTTGAAATCAATGCTGTTAGATTCTGT  550

seq1  CTCTATTATCTAAGATGTTATTAGCTCATCATCAAGTGAATATAAAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTATCTAAGATGTTATTAGCTCATCATCAAGTGAATATAAAAAGT  600

seq1  GTTTTAAATGAAATCAAAGGTGAAAGATACATATAAAAAATAGCTAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATGAAATCAAAGGTGAAAGATACATATAAAAAATAGCTAAGCC  650

seq1  TAAAGTTTTTAAAAAAATCAGTTTCAATCTGAAAACACATTTATGATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTTTAAAAAAATCAGTTTCAATCTGAAAACACATTTATGATTAG  700

seq1  AGCAGGTAAATAGTATGTAGAGTCAGATTCATACAGGTCAGGATTTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAAATAGTATGTAGAGTCAGATTCATACAGGTCAGGATTTACAA  750

seq1  TGAATATAGCAGCTAGGCTCTTTTATAACTTGGTACACACAAACACAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATAGCAGCTAGGCTCTTTTATAACTTGGTACACACAAACACAGTT  800

seq1  ATATATA-TTCTAGCATAGTAGGAAAAAAATGGTGTTGGGGAGAGAAAGT  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTTCTAGCATAGTAGGAAAAAAATGGTGTTGGGGAGAGAAAGT  850

seq1  TGTAGAAAGAGAT-GGAAAAAAATTGGAAATTCTTCAAACCTTCTTTTCG  898
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAAGAGATGGGAAAAAAATTGGAAATTCTTCAAACCTTCTTTTCG  900

seq1  GGTGACAAGGTAGTTATAGATTAAAAAACAGGATAGAAGTATTTCCCTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAAGGTAGTTATAGATTAAAAAACAGGATAGAAGTATTTCCCTGC  950

seq1  GAT-GAAGGCAGTAACA-TTTTAATA-TTTAAGTAGAATCAAGGCCAGAT  995
      ||| ||||||||||||| |||||||| ||||||||||||||  |||||||
seq2  GATGGAAGGCAGTAACATTTTTAATATTTTAAGTAGAATCA--GCCAGAT  998

seq1  TAAACA-GGTA-GAAATAGCAGACATGCCATTCCAAGGCAACCCACATGA  1043
      |||||| |||| |||||||||||| ||||||| ||||   ||||||||| 
seq2  TAAACAGGGTAGGAAATAGCAGACTTGCCATT-CAAG--CACCCACATG-  1044

seq1  GGGCAGGAAGAAAGGAAAATGAGCC-TGAAATGAGTTA-TTCTGAGTAGC  1091
          ||| ||| | | ||||||||| |||||||||||| |||||||||||
seq2  ----AGGCAGAGATGGAAATGAGCCTTGAAATGAGTTATTTCTGAGTAGC  1090

seq1  TGTTAAACT-CTTGCTT  1107
      ||||||||| |||||||
seq2  TGTTAAACTCCTTGCTT  1107