BAC Information

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BAC

Clone NameB6Ng01-187I13
Chromosome14 (Build37)
Map Location 111,275,841 - 111,276,711
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772
Downstream geneEG622052, LOC100043491, LOC100043494, Slitrk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187I13.bB6Ng01-187I13.g
ACCGA012089GA012090
length8781,207
definitionB6Ng01-187I13.b B6Ng01-187I13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaatagagaaagatgtaaaactacaaagagtgtgagagaaaa
tttaaaaaaataaaaaaggcattgaatgatatttgaatcacatatccttg
aatggtttgtatatgtattgataggataggtataagatcagggtgaggta
aaatgttataagcgaagactccagaatagaatagtctgagaatataaacg
atggattttctaccactgagttgtatggtctggagaggcaattctgtttt
gaaaggctattctgacatctgagcttcttccataagtttgaattgcatca
tccaaggcaggcattggcaaaggagctcataagctaagcatagaaagctg
ctgcttatagaatcaaagcatcagtggaccacagtggtgcgggtttcttt
atcccttgccaatgccttcctttctgctacacggacacactcattgaata
tctgtgacaaaagtccaatgtcctgcaatgcctaaatatttatcatctga
ctttttcaataaaagtaatcatattccatatatttggaagaagtgccttt
tcattatggataatccctaatttatctaaagcacatttaccatacttaat
gtttagatacaattcagtttacatttcacgtaaggttaaaatgtaattta
cagagaggtagtatgcttttcatttattaaccaaaagtctatctaaaatg
aaatgtggagaatagcaattctagacatactaataatacattaatatatt
tgaacctttaaaaacacaaagtcaaaatatccccccccagctgaatacat
ttagctatttatgggtaatatcgcaatatgaaacaaagcaattgacaaga
ggaaaaggttaaatgacaatttgacttt
gaattcaaggcccatacctaaacataataaaagcaattcactgcaaacca
acagccaatatcaaattaaatggagacatacttgaagcaataccactgaa
atcagggacaagacaaggatgcccactctccccatatccattcaatgtag
tactcaaagtgttagataggacaataagacaacaaaaaagagatcaaagg
gatacaacttggcaaagaagaaataaaggtatcactacttgcagatgata
tggtagtatacataactgaacctaaaaattctatcagagaacttctccat
ctggaaaacaacttgagcaaagtggccagatataaaattaactcaaatta
atcagtagccttcctttattcaaatgatagacaggctgagaaagaaatta
cagaaataactctctccacaataggcataaatattataaaatatcttggg
gtaattctaaccaaacaagtgaaatacctgtatgacaacaacttcaagtt
tctcaaaaaaacaaaaaacaaaaaacaaaaaacaaaaaactgatggtctc
agaaagtggagagatctcccagctcatgaatcagcagaattaacagtaaa
aatggccatcctaccaaaggcaatctatacatgcaatacaatttccatca
aaataccaacacaattcttcaaagacatcgaaatggtaattctctaattc
atctggaaaggcaaaatataatccccagaatagcacaaacaattattaac
aataaaagaatggccggagaatcaccatccctgacctcaagcttttctac
agagcaattatgattaaaaactacatagtattggtacagagatagctatg
ttgatcaatggaatagaattgaaaacccataaataaaaccacacacttac
agacacttgatctttgaaaaaaaatgccaaaaatatacaatggaaaaaaa
agaaagcatcctttcaataaattggtgctgatcaaactggcctgtcttgt
atgtagaaaaatgaaaataagacccctattttggtccacctttgacaagc
ttcagtcattgttgaatcaagaccctcaacataaaacagatactcctgga
attctatagaacgcaaagtggcaaaggaggcgttgaaattcattggacag
gggcaacttcataaaccgactcaaaatctctcattcttctccagagaatc
tcaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111275841_111276711
seq2: B6Ng01-187I13.b_51_928

seq1  GAATTCCTAAATAGAGAAAGATGTAAAACTACAAAGAGTGTGAGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATAGAGAAAGATGTAAAACTACAAAGAGTGTGAGAGAAAA  50

seq1  TTTAAAAAAATAAAAAAGGCATTGAATGATATTTGAATCACATATCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAATAAAAAAGGCATTGAATGATATTTGAATCACATATCCTTG  100

seq1  AATGGTTTGTATATGTATTGATAGGATAGGTATAAGATCAGGGTGAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTGTATATGTATTGATAGGATAGGTATAAGATCAGGGTGAGGTA  150

seq1  AAATGTTATAAGCGAAGACTCCAGAATAGAATAGTCTGAGAATATAAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATAAGCGAAGACTCCAGAATAGAATAGTCTGAGAATATAAACG  200

seq1  ATGGATTTTCTACCACTGAGTTGTATGGTCTGGAGAGGCAATTCTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTTCTACCACTGAGTTGTATGGTCTGGAGAGGCAATTCTGTTTT  250

seq1  GAAAGGCTATTCTGACATCTGAGCTTCTTCCATAAGTTTGAATTGCATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCTATTCTGACATCTGAGCTTCTTCCATAAGTTTGAATTGCATCA  300

seq1  TCCAAGGCAGGCATTGGCAAAGGAGCTCATAAGCTAAGCATAGAAAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGCAGGCATTGGCAAAGGAGCTCATAAGCTAAGCATAGAAAGCTG  350

seq1  CTGCTTATAGAATCAAAGCATCAGTGGACCACAGTGGTGCGGGTTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTATAGAATCAAAGCATCAGTGGACCACAGTGGTGCGGGTTTCTTT  400

seq1  ATCCCTTGCCAATGCCTTCCTTTCTGCTACACGGACACACTCATTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTGCCAATGCCTTCCTTTCTGCTACACGGACACACTCATTGAATA  450

seq1  TCTGTGACAAAAGTCCAATGTCCTGCAATGCCTAAATATTTATCATCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACAAAAGTCCAATGTCCTGCAATGCCTAAATATTTATCATCTGA  500

seq1  CTTTTTCAATAAAAGTAATCATATTCCATATATTTGGAAGAAGTGCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAATAAAAGTAATCATATTCCATATATTTGGAAGAAGTGCCTTT  550

seq1  TCATTATGGATAATCCCTAATTTATCTAAAGCACA-TTACCATACTTAAT  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCATTATGGATAATCCCTAATTTATCTAAAGCACATTTACCATACTTAAT  600

seq1  G-TTAGATACAATTCAG-TTACATTTCACGTAAGGTTAAAATGTAGTTTA  647
      | ||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  GTTTAGATACAATTCAGTTTACATTTCACGTAAGGTTAAAATGTAATTTA  650

seq1  CAGAGAGGTAGTATGC-TTTCA-TTATAAACCAAAAGTCTATCT-AAATG  694
      |||||||||||||||| ||||| |||| |||||||||||||||| |||||
seq2  CAGAGAGGTAGTATGCTTTTCATTTATTAACCAAAAGTCTATCTAAAATG  700

seq1  AAATGTGGAGAATAGCAATTCTAGACATACTAATAATACATTAATAGTAT  744
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATGTGGAGAATAGCAATTCTAGACATACTAATAATACATTAATA-TAT  749

seq1  TTGAACCTTT-AAAACACATAGTCAAGAATAT-CCTCCCCAGCTGAATAC  792
      |||||||||| |||||||| |||||| ||||| || ||||||||||||||
seq2  TTGAACCTTTAAAAACACAAAGTCAA-AATATCCCCCCCCAGCTGAATAC  798

seq1  ATTTAGCTTTTTTATGGTTAATATCGCAATATG-AACAAAGCAATTGACA  841
      ||||||| | ||||||| ||||||||||||||| ||||||||||||||||
seq2  ATTTAGC-TATTTATGGGTAATATCGCAATATGAAACAAAGCAATTGACA  847

seq1  AGAGG-AAAGGTAGAATGACAATTTGACTTT  871
      ||||| ||||||  |||||||||||||||||
seq2  AGAGGAAAAGGTTAAATGACAATTTGACTTT  878