BAC Information

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BAC

Clone NameB6Ng01-188H17
Chromosome14 (Build37)
Map Location 50,520,932 - 50,522,123
singlet/doubletsinglet
Overlap geneOlfr722
Upstream geneExoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4, 3632451O06Rik, LOC667006
Downstream geneOlfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188H17.bB6Ng01-188H17.g
ACCGA012770GA012771
length1,2061,192
definitionB6Ng01-188H17.b B6Ng01-188H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgaatcttccttagaagggaaaataaaataacagtaagaggca
gatggatggaggtaactgggtgagagagtgaatagggagtgcaatgtggg
gtaggaggtcagtcaggatcaggtgtttgaggggacaaggaagatggcaa
atgaccataagtataaatggaaatatacaaatttggaggcaggggaaatc
tcaaggatatgccggagacctgggataatggtggcatccaaaaataaatt
gggtgaccttagctgagacttaacatcattgaggatatgtacctgaatag
gtcatctcttataataaggcaggaaccacagtggagtcatggggacaata
gctcactcacaaaacttttgacccaaaatgcatcctgtctatgagaaatg
catgggcagggaatggatcagtgactaggggaatggccaaccaataacca
atccaattataaacccatcccatgggcaaacatcagaccctaacactatc
accctaacactatcaatgatactctgttatacttgcagaaaagagtatag
aaaagctgtcctcagagagcctctactgagcacctaattcagattgatgc
agatggatccaccaccaaacagtggatgaagcttggggactctgataaaa
tagttggaagatggttacaggatccaaagggaataggaactccacaaaaa
gatcaccagagtcaactattcttgacccttggagctctcagacaatgaat
caccaaccaacgagtattcacaagctagccctactccccacaaatgtagc
agatgtacagtttagtcttcctataggtccccaacaacttgagcagtgat
tatcccaaaatttgttgcctgtatatagtatattttcttctatctgggct
atgttgtcttacctcagtgggagaggatgctcctagccctgcagagactc
gacatgctaaaatgggggggatgggagcagatatctagttacggctcttg
atagagatcagcttaatgagatgtaaagtggataattaaaaaaagaacac
gtgtctaagttattgggattttttggccctcaagcttcagaatgattcat
atttaacttctggatcttctctcacttcaagtaattccaatggaagaact
tggagatgttcttggtccaccttcggtttaaatagaaatttctcgataaa
tagttc
gaattcagtgattagataaattatgctacaatatgatgaattgctatatt
ggtggaatttttctgatttcctttgtgttggcctcagggtctcagacaga
tttgtgcaaacaaattactaaattactctttctgaatttcagttcctcaa
gtttgattcttgtatcgctctatgctaggatcactgtacaaaacaaaaac
cagttcacataagcagggttacaaggtgatttgcaaacccattaagtttg
ttgtaacattaagcttacttactttttctgatataaagtggtgctaatct
ctttattcactttattttagttcagtattggggaagatccatagtttaca
ttagattcaaattgaaattaagtttgggaataccaaagtttgggaatacc
aaatactgttatttccacttgttttaaataaaatattaacctcttcaatt
ttgggcattagacatgcaggagtattattaaatgagggtaggaaatagta
cacagctgaatttagtgctcagtcttactctgtttcaacagcattgatct
gcattcatgatttcattccaactgtagtcccataaaaatatagctgcttt
tctacttatttgtatatattttataaatacagataatgacaaatcatttc
accttagtagcagtccaatattttcaaaaaagtagctgttcctttccatt
catgggaaaaaatgaactgatcatgtaaaagttttctttaaatatgtttt
ctcatattggtgaatctttagattatgaaatctcctcttcagatttgaga
tgcaaaacaaaatgtgcttggggattttattagcacttgtttaatacaaa
agggaattaattgaacaacaatccaaacaggtaaaaaaaaatttcccatg
tactttttaagtactatatggtcaagaaagatggcatctcagacatcact
gttcatgacacagttttaaattttccattatcaaaacagctacatggtat
aacaattagtttacaaggaaaagaaacaaaatattcatgtgcctaacaca
gtcaattcatgtttatgagaaattaattagttaggcctcaggtcagtaat
taggtatcaggattacgaatttatttagtgacaagaacatatgactgtca
ctattgattcatttctttggaaagaaataatgtgtccttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50520932_50522123
seq2: B6Ng01-188H17.g_67_1258

seq1  GAATTCAGTGATTAGATAAATTATGCTACAATATGATGAATTGCTATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGATTAGATAAATTATGCTACAATATGATGAATTGCTATATT  50

seq1  GGTGGAATTTTTCTGATTTCCTTTGTGTTGGCCTCAGGGTCTCAGACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAATTTTTCTGATTTCCTTTGTGTTGGCCTCAGGGTCTCAGACAGA  100

seq1  TTTGTGCAAACAAATTACTAAATTACTCTTTCTGAATTTCAGTTCCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCAAACAAATTACTAAATTACTCTTTCTGAATTTCAGTTCCTCAA  150

seq1  GTTTGATTCTTGTATCGCTCTATGCTAGGATCACTGTACAAAACAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTCTTGTATCGCTCTATGCTAGGATCACTGTACAAAACAAAAAC  200

seq1  CAGTTCACATAAGCAGGGTTACAAGGTGATTTGCAAACCCATTAAGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCACATAAGCAGGGTTACAAGGTGATTTGCAAACCCATTAAGTTTG  250

seq1  TTGTAACATTAAGCTTACTTACTTTTTCTGATATAAAGTGGTGCTAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACATTAAGCTTACTTACTTTTTCTGATATAAAGTGGTGCTAATCT  300

seq1  CTTTATTCACTTTATTTTAGTTCAGTATTGGGGAAGATCCATAGTTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCACTTTATTTTAGTTCAGTATTGGGGAAGATCCATAGTTTACA  350

seq1  TTAGATTCAAATTGAAATTAAGTTTGGGAATACCAAAGTTTGGGAATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTCAAATTGAAATTAAGTTTGGGAATACCAAAGTTTGGGAATACC  400

seq1  AAATACTGTTATTTCCACTTGTTTTAAATAAAATATTAACCTCTTCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGTTATTTCCACTTGTTTTAAATAAAATATTAACCTCTTCAATT  450

seq1  TTGGGCATTAGACATGCAGGAGTATTATTAAATGAGGGTAGGAAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCATTAGACATGCAGGAGTATTATTAAATGAGGGTAGGAAATAGTA  500

seq1  CACAGCTGAATTTAGTGCTCAGTCTTACTCTGTTTCAACAGCATTGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGAATTTAGTGCTCAGTCTTACTCTGTTTCAACAGCATTGATCT  550

seq1  GCATTCATGATTTCATTCCAACTGTAGTCCCATAAAAATATAGCTGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCATGATTTCATTCCAACTGTAGTCCCATAAAAATATAGCTGCTTT  600

seq1  TCTACTTATTTGTATATATTTTATAAATACAGATAATGACAAATCATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTATTTGTATATATTTTATAAATACAGATAATGACAAATCATTTC  650

seq1  ACCTTAGTAGCAGTCCAATATTTTCAAAAAAGTAGCTGTTCCTTTCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGTAGCAGTCCAATATTTTCAAAAAAGTAGCTGTTCCTTTCCATT  700

seq1  CATGGGAAAAAATGAACTGATCATGTAAAAGTTTTCTTTAAATATGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAAAAAATGAACTGATCATGTAAAAGTTTTCTTTAAATATGTTTT  750

seq1  CTCATATTGGTGAATCTTTAGATTATGAAATCTCCTCTTCAGATTTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTGGTGAATCTTTAGATTATGAAATCTCCTCTTCAGATTTGAGA  800

seq1  TGCAAAACAAAATGTGCTTGGGGATTTTATTAGCACTTGTTTAATACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACAAAATGTGCTTGGGGATTTTATTAGCACTTGTTTAATACAAA  850

seq1  AGGGAATTAATTGAACAACAATCCAAACAGGTAAAAAAAAATTTCCCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATTAATTGAACAACAATCCAAACAGGTAAAAAAAAATTTCCCATG  900

seq1  TACTTTTTAAGTACTATATGGTCAAGAAAGATGGCATCTCAGACATCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTAAGTACTATATGGTCAAGAAAGATGGCATCTCAGACATCACT  950

seq1  GTTCATGACACAGTTTTAAATTTTCCAATTATCAAAAACAGCTACAATGG  1000
      |||||||||||||||||||||||||| |||||| ||||||||||| ||||
seq2  GTTCATGACACAGTTTTAAATTTTCC-ATTATC-AAAACAGCTAC-ATGG  997

seq1  TATAACAATTAAGTTTACAAGGGAAAAGAAACAAAATATCCATGTGCCTA  1050
      |||||||||| ||||||||| |||||||||||||||||| ||||||||||
seq2  TATAACAATT-AGTTTACAA-GGAAAAGAAACAAAATATTCATGTGCCTA  1045

seq1  ACAACAGTCAATTCATGTTTATGAAGAAATTAATTAG-TAAGCCTCA-GT  1098
      || |||||||||||||||||||| ||||||||||||| || |||||| ||
seq2  AC-ACAGTCAATTCATGTTTATG-AGAAATTAATTAGTTAGGCCTCAGGT  1093

seq1  CAGTAA-TAAGTATACAAGAATACAAATATATTAAGTGACAAGACAATAT  1147
      |||||| || |||| || || ||| ||| |||| ||||||||||  ||||
seq2  CAGTAATTAGGTAT-CAGGATTACGAATTTATTTAGTGACAAGAACATAT  1142

seq1  TACATGT-ACTA-TGTATCATTTCTTT-GAAAG-AATAA--TGTTCTTCC  1191
       || ||| |||| ||  |||||||||| ||||| |||||  ||| |||||
seq2  GAC-TGTCACTATTGATTCATTTCTTTGGAAAGAAATAATGTGTCCTTCC  1191

seq1  T  1192
      |
seq2  T  1192