BAC Information

Click to search

BAC

Clone NameB6Ng01-188P05
Chromosome14 (Build37)
Map Location 97,409,365 - 97,477,975
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188P05.bB6Ng01-188P05.g
ACCGA013103GA013104
length1,146694
definitionB6Ng01-188P05.b B6Ng01-188P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,409,365 - 97,410,507)(97,477,282 - 97,477,975)
sequence
gaattcttgaaatctctgaactcctttgggaatgaaataacttccaggct
caatttgtactggtagcttaatgattaaagatggaaaaaaaaaaacattt
gcctatgcatctaatttttacatgctttgtttttctaagaaacccattaa
aataaactttgcttttagttgctctaattggattcagtacttcacagttg
aaaaaatgttgacttgaaattttaatctcttttacttctaggatggccct
tctagaactcaagagatgtatagggacttgaaaagacagggttattgatg
taaaatgtgtaaggcagtctacttgatttgtcagctgtgtatgaatatcc
attaatgtaagttcaaaacttttataactagtttttttgtttgtttgttt
gtttgttttttctttttttttgctgttgttggtagtggttatcatatctt
tgtccttaaggtacaaggaataaggctacatgctatcttgtgtgaaaaat
aattttatttgttaatatttttctttttacatatcctatatataaaatat
actttaatgtgattttgtattcctcttgggtctagctttagtattaaggt
aattttgtgtttcatgaaataacttttgacaggcttcttaggagtcacag
tttttcatttttttaaaattagatattttctttatttacatttcaaaccc
tttcccctgctccctggaatctctctatcccattgcccctccctctgctt
ctttgaggctgttcccctacccatctacccactcctgtctccctgaactc
aattttctctactctgggctacatatgcagctgaagccatgggttcctcc
atgtgtattccttggtcgggggtttagtccctgggagctctggagggtct
ggctggttgatattgttcttcctatgtagttgcaaaccccttccgctcct
tgcgccctttctctagctgctccattggggaaccctgtaatcagtcaatg
ggtgggctgcaaatatccacctctgtatttgtcaggcctctggcagagcc
ttctcagagacagctatattcaagttcctgtcagccagccactcctaggc
tccacagtaagttcctaagttgctgactttttataggatgaatccc

gaattccactgatgattttcctttgaacgaccttttagtctctgtaaatg
aatttctgttactttgtcactgtaatacaaatgtatgtttcttattaaaa
taaatacatgattgtgaaattaaaaatgttttaaaatgtaaacatttgca
ccatagtacatttttcaacaagctcatcaatattttttgctttcatatgt
cttttaaagtgtctacaatgtttattttctatctgtataacttcagcaat
acataacaatacataaatatttaaatgttataaaattatataggcaatat
atatttatactgagaacactataactaaacatttctagatatatacaatt
ttaactatatactgaattattgaattataaataatacatcaatgttttat
aacaattcaaaacatagataaaatgtgaaaatactttctaaaacatcttc
accattttaattttttttgtctaataagcatgttactgttctgttatttt
ttgttctataaatgactataatggaaagtaagtaagcatttctaagcagt
actaaataatagatttttccatttcaatgaaaaacatttagaacattctt
agtcagaaaccttggatttaagtgttatttcaatttctttcttgctctct
ctctctctctctctctctctctctctctctctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97409365_97410507
seq2: B6Ng01-188P05.b_45_1190

seq1  GAATTCTTGAAATCTCTGAACTCCTTTGGGAATGAAATAACTTCCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAAATCTCTGAACTCCTTTGGGAATGAAATAACTTCCAGGCT  50

seq1  CAATTTGTACTGGTAGCTTAATGATTAAAGATGGAAAAAAAAAAACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTACTGGTAGCTTAATGATTAAAGATGGAAAAAAAAAAACATTT  100

seq1  GCCTATGCATCTAATTTTTACATGCTTTGTTTTTCTAAGAAACCCATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGCATCTAATTTTTACATGCTTTGTTTTTCTAAGAAACCCATTAA  150

seq1  AATAAACTTTGCTTTTAGTTGCTCTAATTGGATTCAGTACTTCACAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTTTGCTTTTAGTTGCTCTAATTGGATTCAGTACTTCACAGTTG  200

seq1  AAAAAATGTTGACTTGAAATTTTAATCTCTTTTACTTCTAGGATGGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTGACTTGAAATTTTAATCTCTTTTACTTCTAGGATGGCCCT  250

seq1  TCTAGAACTCAAGAGATGTATAGGGACTTGAAAAGACAGGGTTATTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACTCAAGAGATGTATAGGGACTTGAAAAGACAGGGTTATTGATG  300

seq1  TAAAATGTGTAAGGCAGTCTACTTGATTTGTCAGCTGTGTATGAATATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTGTAAGGCAGTCTACTTGATTTGTCAGCTGTGTATGAATATCC  350

seq1  ATTAATGTAAGTTCAAAACTTTTATAACTAGTTTTTTTGTTTGTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGTAAGTTCAAAACTTTTATAACTAGTTTTTTTGTTTGTTTGTTT  400

seq1  GTTTGTTTTTTCTTTTTTTTTGCTGTTGTTGGTAGTGGTTATCATATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTTCTTTTTTTTTGCTGTTGTTGGTAGTGGTTATCATATCTT  450

seq1  TGTCCTTAAGGTACAAGGAATAAGGCTACATGCTATCTTGTGTGAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTAAGGTACAAGGAATAAGGCTACATGCTATCTTGTGTGAAAAAT  500

seq1  AATTTTATTTGTTAATATTTTTCTTTTTACATATCCTATATATAAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTTGTTAATATTTTTCTTTTTACATATCCTATATATAAAATAT  550

seq1  ACTTTAATGTGATTTTGTATTCCTCTTGGGTCTAGCTTTAGTATTAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATGTGATTTTGTATTCCTCTTGGGTCTAGCTTTAGTATTAAGGT  600

seq1  AATTTTGTGTTTCATGAAATAACTTTTGACAGGCTTCTTAGGAGTCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTGTTTCATGAAATAACTTTTGACAGGCTTCTTAGGAGTCACAG  650

seq1  TTTTTCATTTTTTTAAAATTAGATATTTTCTTTATTTACATTTCAAACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTTTTTTAAAATTAGATATTTTCTTTATTTACATTTCAAACCC  700

seq1  TTTCCCCTGCTCCCTGGAATCTCTCTATCCCATTGCCCCTCCCTCTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTGCTCCCTGGAATCTCTCTATCCCATTGCCCCTCCCTCTGCTT  750

seq1  CTTTGAGGCTGTTCCCCTACCCATCTACCCACTCCTGTCTCCCTGAACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGCTGTTCCCCTACCCATCTACCCACTCCTGTCTCCCTGAACTC  800

seq1  AATTTTCTCTACTCTGGGCTACATATGCAGCTGAAGCCATGGGTTCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCTACTCTGGGCTACATATGCAGCTGAAGCCATGGGTTCCTCC  850

seq1  ATGTGTATTCCTTGGTCGGGGGTTTAGTCCCTGGGAGCTCTGGAGGGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTCCTTGGTCGGGGGTTTAGTCCCTGGGAGCTCTGGAGGGTCT  900

seq1  GGCTGGTTGATATTGTTCTTCCTATGTAGTTGCAAACCCCTTCCGCTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTGATATTGTTCTTCCTATGTAGTTGCAAACCCCTTCCGCTCCT  950

seq1  TGCGCCCTTTCTCTAGCTGCTCCATTGGGG-ACCCTGTAATCAGTCCAAT  999
      |||||||||||||||||||||||||||||| ||||||||||||||| |  
seq2  TGCGCCCTTTCTCTAGCTGCTCCATTGGGGAACCCTGTAATCAGTCAATG  1000

seq1  GGTTGGCTGCAAATATCCACCTCTGTATTTGTCAGG-CTCTGGCAGAGCC  1048
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGTGGGCTGCAAATATCCACCTCTGTATTTGTCAGGCCTCTGGCAGAGCC  1050

seq1  -TCTCAAGAGACAGCTATA-TCAGGTTCCTGTCAGCAAG-CACTTCTAGG  1095
       |||| ||||||||||||| ||| |||||||||||| || |||| |||||
seq2  TTCTC-AGAGACAGCTATATTCAAGTTCCTGTCAGCCAGCCACTCCTAGG  1099

seq1  CTTCCACAGT-AGTTTCTAGGTTTGCTGACTTTTTATGGGATGGATCCC  1143
      | |||||||| |||| ||| | ||||||||||||||| ||||| |||||
seq2  C-TCCACAGTAAGTTCCTAAG-TTGCTGACTTTTTATAGGATGAATCCC  1146


seq1: chr14_97477282_97477975
seq2: B6Ng01-188P05.g_65_758 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  50

seq1  CAAGAAAGAAATTGAAATAACACTTAAATCCAAGGTTTCTGACTAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGAAATTGAAATAACACTTAAATCCAAGGTTTCTGACTAAGAAT  100

seq1  GTTCTAAATGTTTTTCATTGAAATGGAAAAATCTATTATTTAGTACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAATGTTTTTCATTGAAATGGAAAAATCTATTATTTAGTACTGCT  150

seq1  TAGAAATGCTTACTTACTTTCCATTATAGTCATTTATAGAACAAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGCTTACTTACTTTCCATTATAGTCATTTATAGAACAAAAAATA  200

seq1  ACAGAACAGTAACATGCTTATTAGACAAAAAAAATTAAAATGGTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACAGTAACATGCTTATTAGACAAAAAAAATTAAAATGGTGAAGAT  250

seq1  GTTTTAGAAAGTATTTTCACATTTTATCTATGTTTTGAATTGTTATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAAAGTATTTTCACATTTTATCTATGTTTTGAATTGTTATAAAA  300

seq1  CATTGATGTATTATTTATAATTCAATAATTCAGTATATAGTTAAAATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATGTATTATTTATAATTCAATAATTCAGTATATAGTTAAAATTGT  350

seq1  ATATATCTAGAAATGTTTAGTTATAGTGTTCTCAGTATAAATATATATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTAGAAATGTTTAGTTATAGTGTTCTCAGTATAAATATATATTG  400

seq1  CCTATATAATTTTATAACATTTAAATATTTATGTATTGTTATGTATTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATAATTTTATAACATTTAAATATTTATGTATTGTTATGTATTGCT  450

seq1  GAAGTTATACAGATAGAAAATAAACATTGTAGACACTTTAAAAGACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTATACAGATAGAAAATAAACATTGTAGACACTTTAAAAGACATAT  500

seq1  GAAAGCAAAAAATATTGATGAGCTTGTTGAAAAATGTACTATGGTGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAAAATATTGATGAGCTTGTTGAAAAATGTACTATGGTGCAAA  550

seq1  TGTTTACATTTTAAAACATTTTTAATTTCACAATCATGTATTTATTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATTTTAAAACATTTTTAATTTCACAATCATGTATTTATTTTAA  600

seq1  TAAGAAACATACATTTGTATTACAGTGACAAAGTAACAGAAATTCATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACATACATTTGTATTACAGTGACAAAGTAACAGAAATTCATTTA  650

seq1  CAGAGACTAAAAGGTCGTTCAAAGGAAAATCATCAGTGGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTAAAAGGTCGTTCAAAGGAAAATCATCAGTGGAATTC  694


| Home | SequenceCutter | Blast | Download |