BAC Information

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BAC

Clone NameB6Ng01-189G16
Chromosome14 (Build37)
Map Location 107,316,539 - 107,317,604
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
Downstream geneLOC668752, EG668754
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189G16.bB6Ng01-189G16.g
ACCGA013444GA013445
length1,0931,192
definitionB6Ng01-189G16.b B6Ng01-189G16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctcatgtgtatgtaagtgtacattttaaaattataaagaat
tttatgttaacaaagaaagtttacaggtgccatctccctcaactctgttt
taggtccttttctttcgacttgattccttgtgttttgtatggtcattaat
tccatgttatatcactgaactgccttatatttctttctagtgtgctgctt
gaacatttaacaaggttttcttagcgtttcaggttcaatgaattggtgaa
aactgcagttatgtgcatttccaatcttttcttttgaaaactgaagggaa
ttgaggtggttaggggctgcggggcagcagtcaactattacagtttaagg
aaaaaaaaaataatttgacgtttgctgtgctgagccaagtgaccagggaa
tataaaagcaggtttgcagttgagtagaaaaacattttgatgccacaata
gcccagcaacaagaagacacaaaatacagagcacttcacggagcgatatt
taaagattaggtcaggcttcaagtcatttactacaagccaactaaattaa
ccagaagagagaagccccagggaggaactccaagctgttattgttagaca
atagtttgtgctcagcagatcaggtccctcagttctttcacaatgtcagc
ccgtcttagggagaattttagaagttgtcgtgaattatagcttcactgaa
aagatgctaattgcaatctgagtaattttaagtagacaaactacaagcaa
agacattttaatattgaatgtgtaaaaacatagaaaatacttttgaacga
aacccacgatatttgtggattttaaaccatgtaaaccttttttatattta
taattaaaaagtttaaaataagttataattaacttaaatatatggtcatg
tacttggaatttaaattattgaattaatatgtacagaacatttcattatt
gaaatgtgccacaaaataattaagaattgttgagttcattttttataacc
acctgtgaaaaaacaaaggtttttgttgcaaccattttacacctttaata
cctatttgtatttaatttgaattaactatacggagttagtttc

gaattctctctttagttctgcatactatttttaattgggttagtttactg
atgtctactttctagagtttgttatatactttggatatgagccctctgct
agaagtaaagctggtgaaattgtttcccattctgtaggctgctattctgt
tcagttgacaatgatctttgctttacaacaactttttggttttattaagt
ctcatgtattgattgcggattttagtgcatgtgctattagtgttctgttt
agaaggttgtctcctaagccagtgtgtttaaggctattctctaatttaaa
ttctgttaagctcagtgtgtctggttttatgttgaagtctttgatccatg
tggatttgagttttgtgcagggtgataaatatgaatatattgcattattc
aacaaacagacatcaagttttaccagcaccatttgttgatgatgctttcc
tttttccattatttctttctgacgtctttgtcaaaaattaagtgtacata
ggtatacgaatttatggttgggtctttaattggattccattgatcagtgg
gtctcttttttttttatgccaataccattcagttttttattactacagct
cagtaacacaagagatagttcatgctggccagaatgtggattaagaggaa
cagtcctccattgctggtgaggttgtaagtgccttagttagggttttact
gcaattaacagacagcatgaccaaggcaagttttattataaaggacaaca
ttttaattggagctggctttacaccttaagagggttcagtccatttatca
tcaaggtgagagcatgacagcatctttgaaaggcatggtatagggagagc
tgaaaattctatatctttcatcttgaaggctgctagtggaagacttgact
tctaggaatctaagacaagttgtcttaaagcccaagcccattattgacac
acctttcaccagcaagggccttcaaattagtgcacttccttggaataagc
atagaacaaaccatcacagccaagttcaataatggcagttgtctgaaaaa
aatttcagaattgatggaacctttacgaacccacctatactaaatctttt
gtttattatacacaaagcacactcatgtccttaacaggaaacactgttca
gcctatagatttatttgtgcagttttattttctacatatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107316539_107317604
seq2: B6Ng01-189G16.b_47_1139

seq1  GAATTCACTCTCATGTGTATGTAAGTGTACATTTTAAAATTATAAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCATGTGTATGTAAGTGTACATTTTAAAATTATAAAGAAT  50

seq1  TTTATGTTAACAAAGAAAGTTTACAGGTGCCATCTCCCTCAACTCTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTAACAAAGAAAGTTTACAGGTGCCATCTCCCTCAACTCTGTTT  100

seq1  TAGGTCCTTTTCTTTCGACTTGATTCCTTGTGTTTTGTATGGTCATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCTTTTCTTTCGACTTGATTCCTTGTGTTTTGTATGGTCATTAAT  150

seq1  TCCATGTTATATCACTGAACTGCCTTATATTTCTTTCTAGTGTGCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTTATATCACTGAACTGCCTTATATTTCTTTCTAGTGTGCTGCTT  200

seq1  GAACATTTAACAAGGTTTTCTTAGCGTTTCAGGTTCAATGAATTGGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTAACAAGGTTTTCTTAGCGTTTCAGGTTCAATGAATTGGTGAA  250

seq1  AACTGCAGTTATGTGCATTTCCAATCTTTTCTTTTGAAAACTGAAGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAGTTATGTGCATTTCCAATCTTTTCTTTTGAAAACTGAAGGGAA  300

seq1  TTGAGGTGGTTAGGGGCTGCGGGGCAGCAGTCAACTATTACAGTTTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTGGTTAGGGGCTGCGGGGCAGCAGTCAACTATTACAGTTTAAGG  350

seq1  AAAAAAAAAATAATTTGACGTTTGCTGTGCTGAGCCAAGTGACCAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAATAATTTGACGTTTGCTGTGCTGAGCCAAGTGACCAGGGAA  400

seq1  TATAAAAGCAGGTTTGCAGTTGAGTAGAAAAACATTTTGATGCCACAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGCAGGTTTGCAGTTGAGTAGAAAAACATTTTGATGCCACAATA  450

seq1  GCCCAGCAACAAGAAGACACAAAATACAGAGCACTTCACGGAGCGATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCAACAAGAAGACACAAAATACAGAGCACTTCACGGAGCGATATT  500

seq1  TAAAGATTAGGTCAGGCTTCAAGTCATTTACTACAAGCCAACTAAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTAGGTCAGGCTTCAAGTCATTTACTACAAGCCAACTAAATTAA  550

seq1  CCAGAAGAGAGAAGCCCCAGGGAGGAACTCCAAGCTGTTATTGTTAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAGAGAAGCCCCAGGGAGGAACTCCAAGCTGTTATTGTTAGACA  600

seq1  ATAGTTTGTGCTCAGCAGATCAGGTCCCTCAGTTCTTTCACAATGTCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGTGCTCAGCAGATCAGGTCCCTCAGTTCTTTCACAATGTCAGC  650

seq1  CCGTCTTAGGGAGAATTTTAGAAGTTGTCGTGAATTATAGCTTCACTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTTAGGGAGAATTTTAGAAGTTGTCGTGAATTATAGCTTCACTGAA  700

seq1  AAGATGCTAATTGCAATCTGAGTAATTTTAAGTAGACAAACTACAAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTAATTGCAATCTGAGTAATTTTAAGTAGACAAACTACAAGCAA  750

seq1  AGACATTTTAATATTGAATGTGTAAAAACATAGAAAATAC-TTTGAACGA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGACATTTTAATATTGAATGTGTAAAAACATAGAAAATACTTTTGAACGA  800

seq1  AACCCACGATATTTGTGGATTTTAAACCATGTAAACC-TTTTTATATTTA  848
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AACCCACGATATTTGTGGATTTTAAACCATGTAAACCTTTTTTATATTTA  850

seq1  TAA-TAAAAAG-TTAAAATAAGTTATAATTAACTTAAATATATGGTCATG  896
      ||| ||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAAGTTTAAAATAAGTTATAATTAACTTAAATATATGGTCATG  900

seq1  TACTTGGAATTTAAATTA-TGAA-TAATATGTACAGAACA-TTCAT--AT  941
      |||||||||||||||||| |||| |||||||||||||||| |||||   |
seq2  TACTTGGAATTTAAATTATTGAATTAATATGTACAGAACATTTCATTATT  950

seq1  GAAATGTG-CACAAAATAATAAAGAAT--GTGAG-TCA-TTTTTATAAC-  985
      |||||||| ||||||||||| ||||||   |||| ||| |||||||||| 
seq2  GAAATGTGCCACAAAATAATTAAGAATTGTTGAGTTCATTTTTTATAACC  1000

seq1  -ACTGTGAAAA---ACAGGTTTT--GTGCAACCA-TTTACA-CTTTAATA  1027
        |||||||||   | |||||||   |||||||| |||||| ||||||||
seq2  ACCTGTGAAAAAACAAAGGTTTTTGTTGCAACCATTTTACACCTTTAATA  1050

seq1  -CTA-TTGTA-TTAATTTGAATTAA-TATAAGGAAGTAGTTTC  1066
       ||| ||||| |||||||||||||| |||| |||  |||||||
seq2  CCTATTTGTATTTAATTTGAATTAACTATACGGAGTTAGTTTC  1093


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