BAC Information

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BAC

Clone NameB6Ng01-189M22
Chromosome14 (Build37)
Map Location 64,492,592 - 64,627,279
singlet/doubletdoublet
Overlap gene2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1
Upstream geneWdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9, Xkr6, LOC668306
Downstream gene4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra, Kif13b, Hmbox1, LOC100043657, D14Ertd231e
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189M22.bB6Ng01-189M22.g
ACCGA013730GA013731
length1791,101
definitionB6Ng01-189M22.b B6Ng01-189M22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,627,101 - 64,627,279)(64,492,592 - 64,493,677)
sequence
acttctctgggcatgaacatttcctctataaaatggacagacacacagac
acatgcccttcaggctctgagggagtggtgggaccctccttgcataatca
tagtagtcacacctctttcttccccacttccctctgtcctgcctcgggtt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtg

gaattcactttggatgacatgcagcctcccccactccctcccctctaaat
gcatgtagtcttttgattgtcctttagaacctgactgcatacctgactca
cctgaagcatttgctgacgttaggatgaacctccctaagttgctttaatc
tgctggatactggctgtgtctgctttctattcctggttcagccactccct
tgctggtgaccctgtcagactgcttggtgtgttataccttcatttctctc
tcacagtgaggtttgcatatttatcagccctgctcatgaagaaaggaggc
cttactgtgcagagaagaaagagctgaaggtgcattgtgctaagggagag
gaggtgtcaggaaatagaggacccaaaggctgggaataagaaaggaagag
gaaaaaggagtggaaatctaggtagtacaggaaacagcagataaccactg
tctgcaccatccagtgcaagttggtgttacagttcttttaatttcctaaa
agctgtttctttcagttgttcttgtctctgggtatgaatgacaaacatga
actgttgttatcctaaaggagcctgtctgggtctgcggaagctggcttct
ggctggtgctctcccagacacttccctaaccgtttcccttccttcaaact
ctgtttcctcttctgtaacagaggaggtatttgcaagctgccatgaagct
cagtaaggctctgttctgtggtttttgagacatgacccttcttatggaac
gcatgctcttccagcattgtggaaataggggatttgatgttcatgatgaa
ggttcctagttcccttttgctaatgaggatgagtcatcataagcccctat
gtggtccagaaaactaaaatgtaggaaggcagttcctctgtacagccctc
tgtacagcctgcttgaagacctttccagagcaagagaagcctttgtggtg
gtacactgcttttagtcccagcagtgggagagaagaaggcattgcagatt
ctctgctacctaagccagctctcattgtacattgaaaaactacaaattgc
ctggactagagcaagtgggtaactgtatatctggcctactgctaaaattc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_64627101_64627279
seq2: B6Ng01-189M22.b_53_231 (reverse)

seq1  CACACACACACACACACACACACACACACAACCCGAGGCAGGACAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACAACCCGAGGCAGGACAGAGGG  50

seq1  AAGTGGGGAAGAAAGAGGTGTGACTACTATGATTATGCAAGGAGGGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGGAAGAAAGAGGTGTGACTACTATGATTATGCAAGGAGGGTCCC  100

seq1  ACCACTCCCTCAGAGCCTGAAGGGCATGTGTCTGTGTGTCTGTCCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCCCTCAGAGCCTGAAGGGCATGTGTCTGTGTGTCTGTCCATTTT  150

seq1  ATAGAGGAAATGTTCATGCCCAGAGAAGT  179
      |||||||||||||||||||||||||||||
seq2  ATAGAGGAAATGTTCATGCCCAGAGAAGT  179


seq1: chr14_64492592_64493677
seq2: B6Ng01-189M22.g_65_1165

seq1  GAATTCACTTTGGATGACATGCAGCCTCCCCCACTCCCTCCCCTCTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGGATGACATGCAGCCTCCCCCACTCCCTCCCCTCTAAAT  50

seq1  GCATGTAGTCTTTTGATTGTCCTTTAGAACCTGACTGCATACCTGACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAGTCTTTTGATTGTCCTTTAGAACCTGACTGCATACCTGACTCA  100

seq1  CCTGAAGCATTTGCTGACGTTAGGATGAACCTCCCTAAGTTGCTTTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCATTTGCTGACGTTAGGATGAACCTCCCTAAGTTGCTTTAATC  150

seq1  TGCTGGATACTGGCTGTGTCTGCTTTCTATTCCTGGTTCAGCCACTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGATACTGGCTGTGTCTGCTTTCTATTCCTGGTTCAGCCACTCCCT  200

seq1  TGCTGGTGACCCTGTCAGACTGCTTGGTGTGTTATACCTTCATTTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGACCCTGTCAGACTGCTTGGTGTGTTATACCTTCATTTCTCTC  250

seq1  TCACAGTGAGGTTTGCATATTTATCAGCCCTGCTCATGAAGAAAGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTGAGGTTTGCATATTTATCAGCCCTGCTCATGAAGAAAGGAGGC  300

seq1  CTTACTGTGCAGAGAAGAAAGAGCTGAAGGTGCATTGTGCTAAGGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTGCAGAGAAGAAAGAGCTGAAGGTGCATTGTGCTAAGGGAGAG  350

seq1  GAGGTGTCAGGAAATAGAGGACCCAAAGGCTGGGAATAAGAAAGGAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTCAGGAAATAGAGGACCCAAAGGCTGGGAATAAGAAAGGAAGAG  400

seq1  GAAAAAGGAGTGGAAATCTAGGTAGTACAGGAAACAGCAGATAACCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGAGTGGAAATCTAGGTAGTACAGGAAACAGCAGATAACCACTG  450

seq1  TCTGCACCATCCAGTGCAAGTTGGTGTTACAGTTCTTTTAATTTCCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACCATCCAGTGCAAGTTGGTGTTACAGTTCTTTTAATTTCCTAAA  500

seq1  AGCTGTTTCTTTCAGTTGTTCTTGTCTCTGGGTATGAATGACAAACATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTCTTTCAGTTGTTCTTGTCTCTGGGTATGAATGACAAACATGA  550

seq1  ACTGTTGTTATCCTAAAGGAGCCTGTCTGGGTCTGCGGAAGCTGGCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTTATCCTAAAGGAGCCTGTCTGGGTCTGCGGAAGCTGGCTTCT  600

seq1  GGCTGGTGCTCTCCCAGACACTTCCCTAACCGTTTCCCTTCCTTCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGCTCTCCCAGACACTTCCCTAACCGTTTCCCTTCCTTCAAACT  650

seq1  CTGTTTCCTCTTCTGTAACAGAGGAGGTATTTGCAAGCTGCCATGAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTCTTCTGTAACAGAGGAGGTATTTGCAAGCTGCCATGAAGCT  700

seq1  CAGTAAGGCTCTGTTCTGTGGTTTTTGAGACATGACCCTTCTTATGGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGGCTCTGTTCTGTGGTTTTTGAGACATGACCCTTCTTATGGAAC  750

seq1  GCATGCTCTTCCAGCATTGTGGAAATAGGGGATTTGATGTTCATGATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTCTTCCAGCATTGTGGAAATAGGGGATTTGATGTTCATGATGAA  800

seq1  GGTTCCTAGTTCCC-TTTGCTAATGAGGATGAGTCATCATAAGCCCCTAT  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTTCCTAGTTCCCTTTTGCTAATGAGGATGAGTCATCATAAGCCCCTAT  850

seq1  GTGGTCCAGAAAACTAAAATGTAGGAAGGCAGTTCCTCTGTACAG-CCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGGTCCAGAAAACTAAAATGTAGGAAGGCAGTTCCTCTGTACAGCCCTC  900

seq1  TGTACAGCCTGC-TGAAGACCTTCCCAGAGCAAGAGAAGCCTTTGTGGTG  947
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  TGTACAGCCTGCTTGAAGACCTTTCCAGAGCAAGAGAAGCCTTTGTGGTG  950

seq1  GTACAC-GCCTTTAGTCCCAGCAGTGGGAGAGA--GAGGCA-TGCAGA-T  992
      |||||| || |||||||||||||||||||||||   ||||| |||||| |
seq2  GTACACTGCTTTTAGTCCCAGCAGTGGGAGAGAAGAAGGCATTGCAGATT  1000

seq1  CTCTGC-ACCTAAAGCCAGC-CTCA-TGTACA-TGAAAAACTACAAAATG  1038
      |||||| |||| |||||||| |||| |||||| |||||||||||||| ||
seq2  CTCTGCTACCT-AAGCCAGCTCTCATTGTACATTGAAAAACTACAAATTG  1049

seq1  CCTGG-CTAGAGCAAGTGG--TACTGTAATATCTG--CTACTGCCTAAAT  1083
      ||||| |||||||||||||   ||||| |||||||  |||||||  ||||
seq2  CCTGGACTAGAGCAAGTGGGTAACTGT-ATATCTGGCCTACTGCTAAAAT  1098

seq1  TCC  1086
      |||
seq2  TCC  1101


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