BAC Information

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BAC

Clone NameB6Ng01-192D15
Chromosome14 (Build37)
Map Location 80,801,205 - 80,964,833
singlet/doubletdoublet
Overlap geneLOC672828
Upstream geneMtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192D15.bB6Ng01-192D15.g
ACCGA015518GA015519
length4201,162
definitionB6Ng01-192D15.b B6Ng01-192D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,964,408 - 80,964,833)(80,801,205 - 80,802,378)
sequence
aaccttctgtgtgtttaaggagcaagaaccatttttatattcataaataa
tccaagctctgatattcatttgagacaggaattgtaaaagctgggttttc
tttttagaaatccatttaccactaatgcagtaggaattacacatgcttag
ttaatgaatatatgtgtcacattaacctacttagaagaggtgattttaaa
aaaaattcttctacagagggagggagggttgtaatatctgcaagttttct
ctttttgcttctgtttaaaactctatcaagtcagtttattgtagggctgt
ggaacatgtaaattggactgctatacataaaataaaggatgttattttaa
gaaaagataaatacaagctagatatatgtatatagtttgtatggtgtgtg
tgtgtgtgtgtgtgtgtgtg

gaattctctctttggtttgcaaacaatgtcccctagatcacatggttctc
tgcttcacagacatcttgggtacaaagatggatctcagaaagatgaggca
aaacaaaacaaaaaaaatccctgtctttgaaatgcatattttattcagcc
tttaagataagggcttcaccctatttcaacccccaaggcttcaggagaaa
atggaggaatggctgcctgtcagaaaataacaaacatggaaaagttttga
caagttcactataattatcatagctgttaacttggttaaaagtaaaattt
ctgttaagcagtaattatgaagtagctgttctagaaatgacatcctttat
ttttttgttctttctttgtctcagctctgtcctgagaagttctgtattag
atatcaattctaccatccctgacttgggaactaattttgtcctatttgct
agtgtctataaggacacggcagagaaagatgatgggtgtgattgtcttgc
tgcttgaagttagctgttttatggttggaaggatgaaagtgttttttcag
taaaataaactttcagttctctgtgcagaggactgttctggtcctcttga
ttggctgtttagaaatgatgaacttgtgacacgtgggtcattgcttcatc
tctgtgctccccttagcattcctgaatccttttgttcatcttagctcaaa
tcccaatcttgctttggaaggcagctctgttcatcatcacttgtcagatc
cagctttgggactggtccttccttgctactccctggagtacacagtgtca
gtagaaacctgatcttgtatatatatattttctctccttgagacatggcc
ttgatatataacctggattgggctggatggttttgtcttctgcctctaac
tttaggaaactgtgatcacagatctgtgcattcatgcccagcagcttgga
taaacatcactggtaaattcctggaaactaaaaaaatcaaaaaccaactt
ccccaacccccccccaaaacccccaaaaataaactgaaaaacaacaacaa
cagaaacaaaaacaataacagcggaatactaacattaacgtacttttctc
tcttcattcttaagtttgagaaattctagatgcagctattttacaaagga
accaaaatttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80964408_80964833
seq2: B6Ng01-192D15.b_41_466 (reverse)

seq1  CACACACACACACACACACACACACACCATACAAACTATATACATATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACCATACAAACTATATACATATATC  50

seq1  TAGCTTGTATTTATCTTTTCTTAAAATAACATCCTTTATTTTATGTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTATTTATCTTTTCTTAAAATAACATCCTTTATTTTATGTATAG  100

seq1  CAGTCCAATTTACATGTTCCACAGCCCTACAATAAACTGACTTGATAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAATTTACATGTTCCACAGCCCTACAATAAACTGACTTGATAGAG  150

seq1  TTTTAAACAGAAGCAAAAAGAGAAAACTTGCAGATATTACAACCCTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACAGAAGCAAAAAGAGAAAACTTGCAGATATTACAACCCTCCCT  200

seq1  CCCTCTGTAGAAGAATTTTTTTTAAAATCACCTCTTCTAAGTAGGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTAGAAGAATTTTTTTTAAAATCACCTCTTCTAAGTAGGTTAAT  250

seq1  GTGACACATATATTCATTAACTAAGCATGTGTAATTCCTACTGCATTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACATATATTCATTAACTAAGCATGTGTAATTCCTACTGCATTAGT  300

seq1  GGTAAATGGATTTCTAAAAAGAAAACCCAGCTTTTACAATTCCTGTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATGGATTTCTAAAAAGAAAACCCAGCTTTTACAATTCCTGTCTCA  350

seq1  AATGAATATCAGAGCTTGGATTATTTATGAATATAAAAATGGTTCTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATATCAGAGCTTGGATTATTTATGAATATAAAAATGGTTCTTGCT  400

seq1  CCTTAAACACACAGAAGGTTGAATTC  426
      ||||||||||||||||||||||||||
seq2  CCTTAAACACACAGAAGGTTGAATTC  426


seq1: chr14_80801205_80802378
seq2: B6Ng01-192D15.g_66_1227

seq1  GAATTCTCTCTTTGGTTTGCAAACAATGTCCCCTAGATCACATGGTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTTGGTTTGCAAACAATGTCCCCTAGATCACATGGTTCTC  50

seq1  TGCTTCACAGACATCTTGGGTACAAAGATGGATCTCAGAAAGATGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACAGACATCTTGGGTACAAAGATGGATCTCAGAAAGATGAGGCA  100

seq1  AAACAAAACAAAAAAAATCCCTGTCTTTGAAATGCATATTTTATTCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAAAAAATCCCTGTCTTTGAAATGCATATTTTATTCAGCC  150

seq1  TTTAAGATAAGGGCTTCACCCTATTTCAACCCCCAAGGCTTCAGGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATAAGGGCTTCACCCTATTTCAACCCCCAAGGCTTCAGGAGAAA  200

seq1  ATGGAGGAATGGCTGCCTGTCAGAAAATAACAAACATGGAAAAGTTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAATGGCTGCCTGTCAGAAAATAACAAACATGGAAAAGTTTTGA  250

seq1  CAAGTTCACTATAATTATCATAGCTGTTAACTTGGTTAAAAGTAAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCACTATAATTATCATAGCTGTTAACTTGGTTAAAAGTAAAATTT  300

seq1  CTGTTAAGCAGTAATTATGAAGTAGCTGTTCTAGAAATGACATCCTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAGCAGTAATTATGAAGTAGCTGTTCTAGAAATGACATCCTTTAT  350

seq1  TTTTTTGTTCTTTCTTTGTCTCAGCTCTGTCCTGAGAAGTTCTGTATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTCTTTCTTTGTCTCAGCTCTGTCCTGAGAAGTTCTGTATTAG  400

seq1  ATATCAATTCTACCATCCCTGACTTGGGAACTAATTTTGTCCTATTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATTCTACCATCCCTGACTTGGGAACTAATTTTGTCCTATTTGCT  450

seq1  AGTGTCTATAAGGACACGGCAGAGAAAGATGATGGGTGTGATTGTCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTATAAGGACACGGCAGAGAAAGATGATGGGTGTGATTGTCTTGC  500

seq1  TGCTTGAAGTTAGCTGTTTTATGGTTGGAAGGATGAAAGTGTTTTTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAAGTTAGCTGTTTTATGGTTGGAAGGATGAAAGTGTTTTTTCAG  550

seq1  TAAAATAAACTTTCAGTTCTCTGTGCAGAGGACTGTTCTGGTCCTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAACTTTCAGTTCTCTGTGCAGAGGACTGTTCTGGTCCTCTTGA  600

seq1  TTGGCTGTTTAGAAATGATGAACTTGTGACACGTGGGTCATTGCTTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGTTTAGAAATGATGAACTTGTGACACGTGGGTCATTGCTTCATC  650

seq1  TCTGTGCTCCCCTTAGCATTCCTGAATCCTTTTGTTCATCTTAGCTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTCCCCTTAGCATTCCTGAATCCTTTTGTTCATCTTAGCTCAAA  700

seq1  TCCCAATCTTGCTTTGGAAGGCAGCTCTGTTCATCATCACTTGTCAGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCTTGCTTTGGAAGGCAGCTCTGTTCATCATCACTTGTCAGATC  750

seq1  CAGCTTTGGGACTGGTCCTTCCTTGCTACTCCCTGGAGTACACAGTGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGGGACTGGTCCTTCCTTGCTACTCCCTGGAGTACACAGTGTCA  800

seq1  GTAGAAACCTGATCTTGTATATATATATTTTCTCTCCTTGAGACATGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACCTGATCTTGTATATATATATTTTCTCTCCTTGAGACATGGCC  850

seq1  TTGATATATAACCTGGATTGGGCTGGATGGTTTTGTCTTCTGCCTCTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATATAACCTGGATTGGGCTGGATGGTTTTGTCTTCTGCCTCTAAC  900

seq1  TTTAGGAAACTGTGATCACAGATCTGTGCATTCATGCCCAGCAGCTTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAAACTGTGATCACAGATCTGTGCATTCATGCCCAGCAGCTTGGA  950

seq1  TAAACATCACTGGTAAATTCCTGGAAACTAAAAAAATCAAAAACCAACTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TAAACATCACTGGTAAATTCCTGGAAACTAAAAAAATCAAAAACCAACTT  1000

seq1  CCCCAACCCCCCCCCAAAACCCCCAAAAAATAAAACTGAAAAAACAAACA  1050
      |||||||||||||||||||||||||||||   |||||| ||||||||   
seq2  CCCCAACCCCCCCCCAAAACCCCCAAAAA--TAAACTG-AAAAACAA--C  1045

seq1  AACAAACAAGAAACAAAAAACAAATAACAAGCCAGAATACATAACATTAA  1100
      |||||   |||||||||||   |||||||   | |||||| |||||||||
seq2  AACAA--CAGAAACAAAAA--CAATAACA--GCGGAATAC-TAACATTAA  1088

seq1  CGTAC-TTTCTCTC-TCATTCTTAAAGTTTGTAGAATCCTAGAATGGCAG  1148
      ||||| |||||||| |||||||| |||||||   ||| |||||   ||||
seq2  CGTACTTTTCTCTCTTCATTCTT-AAGTTTGAGAAATTCTAGA--TGCAG  1135

seq1  CTATTTATCACAAGAA-CAAAATTTGA  1174
      ||||||  || | ||| ||||||||||
seq2  CTATTTTACAAAGGAACCAAAATTTGA  1162


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