BAC Information

Click to search

BAC

Clone NameB6Ng01-192D23
Chromosome14 (Build37)
Map Location 111,312,867 - 111,314,041
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772
Downstream geneEG622052, LOC100043491, LOC100043494, Slitrk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192D23.bB6Ng01-192D23.g
ACCGA015534GA015535
length1,1751,180
definitionB6Ng01-192D23.b B6Ng01-192D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaattcactgcaaacca
acagccaatatcaaattaaatggagacatacttgaagcaataccactgaa
atcagggacaagacaaggatgcccactctccccatatccattcaatgtag
tactcaaagtgttagataggacaataagacaacaaaaaagagatcaaagg
gatacaacttggcaaagaagaaataaaggtatcactacttgcagatgata
tggtagtatacataactgaacctaaaaattctatcagagaacttctccat
ctggaaaacaacttgagcaaagtggccagatataaaattaactcaaatta
atcagtagccttcctttattcaaatgatagacaggctgagaaagaaatta
cagaaataactctctccacaataggcataaatattataaaatatcttggg
gtaattctaaccaaacaagtgaaatacctgtatgacaacaacttcaagtt
tctcaaaaaaacaaaaaacaaaaaacaaaaaacaaaaaactgatggtctc
agaaagtggagagatctcccagctcatgaatcagcagaattaacagtaaa
aatggccatcctaccaaaggcaatctatacatgcaatacaatttccatca
aaataccaacacaattcttcaaagacatcgaaatggtaattctctaattc
atctggaaaggcaaaatataatccccagaatagcacaaacaattattaac
aataaaagaatggccggagaatcaccatccctgacctcaagcttttctac
agagcaattatgattaaaaactacatagtattggtacagagatagctatg
ttgatcaatgggaatagaattgaaaacccataaataaaaccacacactta
cagacacttgatctttgacaaaaatgccaaaaatatacaatggaaaaaaa
gaaagcatcttcaataatggtgctgatcaactggctgtctgtatgtagaa
aaatgaaaatagacccctatttgtcacttgacaaagctcagtcatgtgat
cagaactcacataaacagatactctgatctatagaagaagtgggaaagag
cgttgattcattgcacaggggggaattcacgaactcaaattctcaatctc
cagatcagatcaataaatggggaat
gaattcaaggaagcatggaaacttgacagaacaattggtcttagaaatta
atcttgtgtgctctgtatagcttgcattgtaccctggcaactgcaactgc
aatgatcctggcaattgccattatattctgtttctgataaaggggtaaaa
cgtctgattgctctcaataaaattgttacagccataatcttgcttttgcc
ctgccaatctgagcctggtttcattccttgtggcaatgtcagtttacttt
ggcattggcactgacatatatattcattgtcattgctctgcatttatatg
tcagctgaaaatttagaaaattatatatgtatatatatatatatatatac
tatgtatataaatgtatttgattacacaaaatattctctgtacttaatat
ttccctctcatatcatcaactctaatatcacttctaatttaatttttttg
aagttacaataaaatataattttctcattcctttaaccctccccaatcac
acccatatatatttcctcaatctagttctaatttatagcctctttttcaa
tatatgttttttcttaatatataattgaaacatgcccaatatatataata
tttatatataatattacttgtatctataagttctcagatccaaacttttg
ccattggaaaatcaatttgtgggcacatacgtagggaagacttttttttt
ttctactctcagatttcctttgttaactttaatacatttgtttggcttta
agtttcatgagactttccacgtttatgttagggtttctattgcaattgtt
tttgtatagttcatgttttgctaatcatgttagtgagattttttttggac
atagcttctattatttctaggagagacaatttcctgtttctatggctcta
gcaatctttcaccacctcttaggcatgatctctgaaccccaggtgatgga
gttatattgtcttcatttggactggactcaacaactctgcattttgtttg
gttgtgattttctgtacatttctgagactggtttttcagaaatgaacaaa
aagcttgattaacatctctctagattggctggagtgtaaagacaatcaac
gttccaacaaggcccttcacaccttggatctatgtagtgtggccaatgaa
cctgccacacacaataatgtgccacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111312867_111314041
seq2: B6Ng01-192D23.g_64_1243

seq1  GAATTCAAGGAAGCATGGAAACTTGACAGAACAATTGGTCTTAGAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAAGCATGGAAACTTGACAGAACAATTGGTCTTAGAAATTA  50

seq1  ATCTTGTGTGCTCTGTATAGCTTGCATTGTACCCTGGCAACTGCAACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTGTGCTCTGTATAGCTTGCATTGTACCCTGGCAACTGCAACTGC  100

seq1  AATGATCCTGGCAATTGCCATTATATTCTGTTTCTGATAAAGGGGTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCTGGCAATTGCCATTATATTCTGTTTCTGATAAAGGGGTAAAA  150

seq1  CGTCTGATTGCTCTCAATAAAATTGTTACAGCCATAATCTTGCTTTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGATTGCTCTCAATAAAATTGTTACAGCCATAATCTTGCTTTTGCC  200

seq1  CTGCCAATCTGAGCCTGGTTTCATTCCTTGTGGCAATGTCAGTTTACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATCTGAGCCTGGTTTCATTCCTTGTGGCAATGTCAGTTTACTTT  250

seq1  GGCATTGGCACTGACATATATATTCATTGTCATTGCTCTGCATTTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGGCACTGACATATATATTCATTGTCATTGCTCTGCATTTATATG  300

seq1  TCAGCTGAAAATTTAGAAAATTATATATGTATATATATATATATATATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAAAATTTAGAAAATTATATATGTATATATATATATATATATAC  350

seq1  TATGTATATAAATGTATTTGATTACACAAAATATTCTCTGTACTTAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATAAATGTATTTGATTACACAAAATATTCTCTGTACTTAATAT  400

seq1  TTCCCTCTCATATCATCAACTCTAATATCACTTCTAATTTAATTTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTCATATCATCAACTCTAATATCACTTCTAATTTAATTTTTTTG  450

seq1  AAGTTACAATAAAATATAATTTTCTCATTCCTTTAACCCTCCCCAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACAATAAAATATAATTTTCTCATTCCTTTAACCCTCCCCAATCAC  500

seq1  ACCCATATATATTTCCTCAATCTAGTTCTAATTTATAGCCTCTTTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATATATATTTCCTCAATCTAGTTCTAATTTATAGCCTCTTTTTCAA  550

seq1  TATATGTTTTTTCTTAATATATAATTGAAACATGCCCAATATATATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTTTCTTAATATATAATTGAAACATGCCCAATATATATAATA  600

seq1  TTTATATATAATATTACTTGTATCTATAAGTTCTCAGATCCAAACTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATAATATTACTTGTATCTATAAGTTCTCAGATCCAAACTTTTG  650

seq1  CCATTGGAAAATCAATTTGTGGGCACATACGTAGGGAAGAC-TTTTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCATTGGAAAATCAATTTGTGGGCACATACGTAGGGAAGACTTTTTTTTT  700

seq1  TTCTACTCTCAGATTTCCTTTGTTAACTTTAATACATTTGTTTGGCTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTCTCAGATTTCCTTTGTTAACTTTAATACATTTGTTTGGCTTTA  750

seq1  AGTTTCATGAGACTTTCCACGTTTATGTTAGGGTTTCTATTGCAATTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCATGAGACTTTCCACGTTTATGTTAGGGTTTCTATTGCAATTGTT  800

seq1  TTTGTATAGTTCATGTTTTGCTAATCATGTTAGTGAGA-TTTTTTTGGAC  848
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTGTATAGTTCATGTTTTGCTAATCATGTTAGTGAGATTTTTTTTGGAC  850

seq1  ATAGCTTCTATTATTTCTAGGAGAGACAATTTCCTGTTTCTATGGCTCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTCTATTATTTCTAGGAGAGACAATTTCCTGTTTCTATGGCTCTA  900

seq1  GCAATCTTTCACCACCTCTTAGGCAATGATCTCTGAACCCCAGGTGATGG  948
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCAATCTTTCACCACCTCTTAGGC-ATGATCTCTGAACCCCAGGTGATGG  949

seq1  AGTTATATTGTCTTCATTTGGACTGGACTCAACAACTCTGCATTTTGTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATTGTCTTCATTTGGACTGGACTCAACAACTCTGCATTTTGTTT  999

seq1  GGTTGTGATTTTCTGTAACATTTCTGAAGACTGGTTCTTCAGAAATGAAC  1048
      |||||||||||||||| ||||||||| ||||||||| |||||||||||||
seq2  GGTTGTGATTTTCTGT-ACATTTCTG-AGACTGGTTTTTCAGAAATGAAC  1047

seq1  ATAAAGCCTGAATTACATCTCTAGA-ATTTGCT-GAGTGTAAAAAGACAA  1096
      | ||||| ||| | ||||||||  | ||| ||| ||||||  ||||||||
seq2  AAAAAGCTTGATTAACATCTCTCTAGATTGGCTGGAGTGT--AAAGACAA  1095

seq1  TCAACG-TCCAACA--GCCC-TCACAC--TTGATCTATGTAGTGT-GCAA  1139
      |||||| |||||||  |||| ||||||  | |||||||||||||| || |
seq2  TCAACGTTCCAACAAGGCCCTTCACACCTTGGATCTATGTAGTGTGGCCA  1145

seq1  TTGGACCTGCCACACACACATATGTGCACACACACA  1175
       || ||||||||||||||   |||||| ||||||||
seq2  ATGAACCTGCCACACACAATAATGTGC-CACACACA  1180