BAC Information

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BAC

Clone NameB6Ng01-192O10
Chromosome14 (Build37)
Map Location 26,719,164 - 26,720,207
singlet/doubletsinglet
Overlap genePlac9
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11
Downstream geneD14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192O10.bB6Ng01-192O10.g
ACCGA016018GA016019
length1,1921,059
definitionB6Ng01-192O10.b B6Ng01-192O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagctgtaggcttcaaggattttctaggacattggaacactga
tggaggcttacctatgtcagaattcaatctttagaggcacttataataaa
acaatactgaaagagagcacgtggatccatacactagactaacgtaggga
tagggtatgagtatacggttatgagaatgccaaggttccaggaggttgag
tgcatggcagggtttggagtctagccaaggagatcctgagagctcactac
atgaagctgtgaaaatggatcccttgtgtggtggagatgccaggacaatc
cagtgtcagccaagaaacctgcaggagtggagtagagctagcccaaggga
ctggttatctgtgctgaagggggagcattggctctgtccaagccctttca
agctcagaacattccatcatggcccaggggtcacacatggagctatagaa
ttttatattttccctgctgggttttggtcaagctttgattcagtcattct
ttattgcgcccccatcttcctctttggatgaaaatgtttattttgtgcca
ctgtgtgttggaagtaaacagtatgcagcttgtttttactttatagaacc
ttcaaggagatatttgataagagatttcagtctgataatctaggcctagg
ctgcaagacacaagtttgtgacatggatcttttacatggagatcttgagg
catagtggccatgaaaagtttagacctagtcaaggtagtacactccttta
atcccaggagactgaggcaaggagacctctgagttcaaggtcagcctggg
acaaagcacgtcccagatccaggcatggcagtacattcctttaatctagc
tcacacctttctgctggagacctacataagtacattggaagagggaacat
tctctcttctcacctgcttgccttgtgggactaagcaactgctagatcct
tggatttccattcaagctgctgctgaccattgttgggggagtggactaca
gactatcattcaacaagattccctgactacatagaggactaccataaggt
tctgtgactcagaaaaccctgactaaatacagattacctacgataagctg
cagcagcagcaaagctctccatgtgcttctgagaaaatagggaccttagg
aaacgggcttaatgcgaagcctaccctcgggtaagtccttga
gaattcacacaggcatacatgcatgcatacagacagacagacagacaatt
tttcaattataaaaagtaagggagggctggcgagatggctcagcgggtaa
gtgcacactgactgctcttctgaaggccctgagttcaaatcccagcaacc
acatggtggctcacaaccacctgtaatgagatctgacgccctcttctggt
gtgtctgaagacagtgtatttatatataataataaataaatctttgggac
tgagtgagcagagttaactggagctagtggggccaaccagagcgagcaga
ggtcctaaaattcaattcccaacaatcacatgaaggctcacaaccatcta
tacaactacagtgtactcacatacataaaataaataaatcttaaaaaaaa
aagtaagggagtcaggcagtaatgatacatgccttggtcacagcactggg
gaggcagaggcaggtggatcctcctgagttctaagccagtctggtctaca
gagccagttcaaggacagccaaaactacacaaagaaatcctgcctcaaaa
aaaagtacacaagtaaacaaacaaacaaataaataagaagacatggaaga
gtcttctgacaatggaaacaggaactgagctgaggttggcctctgaatag
tcctgtatgagggggttgctaagaccactcattggataacaattacccaa
ctgcacaaacccagagaccagaactctatcctcagaacacacataaaggt
ggaaaaagagagccaactccacagagctgttccctgacttcctcactccc
actgtgcaactctgagcacaataataaacaaattacaagaagccacacca
attgactactacacttttgaagaaaaaaagtctatccttagcagaaatca
aagacattcagtttaaaataataaagatgggcctgggggatgtaacctca
gttggcagaatgccttggctttgaaattttgaggcctcagttttgccccc
tccagccaccatctaaaaacagaaatggttaggtatacatcctttaatcg
agggcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26719164_26720207
seq2: B6Ng01-192O10.g_68_1126

seq1  GAATTCACACAGGCATACATGCATGCATACAGACAGACAGACAGACAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAGGCATACATGCATGCATACAGACAGACAGACAGACAATT  50

seq1  TTTCAATTATAAAAAGTAAGGGAGGGCTGGCGAGATGGCTCAGCGGGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTATAAAAAGTAAGGGAGGGCTGGCGAGATGGCTCAGCGGGTAA  100

seq1  GTGCACACTGACTGCTCTTCTGAAGGCCCTGAGTTCAAATCCCAGCAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACTGACTGCTCTTCTGAAGGCCCTGAGTTCAAATCCCAGCAACC  150

seq1  ACATGGTGGCTCACAACCACCTGTAATGAGATCTGACGCCCTCTTCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGGCTCACAACCACCTGTAATGAGATCTGACGCCCTCTTCTGGT  200

seq1  GTGTCTGAAGACAGTGTATTTATATATAATAATAAATAAATCTTTGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAAGACAGTGTATTTATATATAATAATAAATAAATCTTTGGGAC  250

seq1  TGAGTGAGCAGAGTTAACTGGAGCTAGTGGGGCCAACCAGAGCGAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGCAGAGTTAACTGGAGCTAGTGGGGCCAACCAGAGCGAGCAGA  300

seq1  GGTCCTAAAATTCAATTCCCAACAATCACATGAAGGCTCACAACCATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAAAATTCAATTCCCAACAATCACATGAAGGCTCACAACCATCTA  350

seq1  TACAACTACAGTGTACTCACATACATAAAATAAATAAATCTTAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTACAGTGTACTCACATACATAAAATAAATAAATCTTAAAAAAAA  400

seq1  AAGTAAGGGAGTCAGGCAGTAATGATACATGCCTTGGTCACAGCACTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGGGAGTCAGGCAGTAATGATACATGCCTTGGTCACAGCACTGGG  450

seq1  GAGGCAGAGGCAGGTGGATCCTCCTGAGTTCTAAGCCAGTCTGGTCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGTGGATCCTCCTGAGTTCTAAGCCAGTCTGGTCTACA  500

seq1  GAGCCAGTTCAAGGACAGCCAAAACTACACAAAGAAATCCTGCCTCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGTTCAAGGACAGCCAAAACTACACAAAGAAATCCTGCCTCAAAA  550

seq1  AAAAGTACACAAGTAAACAAACAAACAAATAAATAAGAAGACATGGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTACACAAGTAAACAAACAAACAAATAAATAAGAAGACATGGAAGA  600

seq1  GTCTTCTGACAATGGAAACAGGAACTGAGCTGAGGTTGGCCTCTGAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGACAATGGAAACAGGAACTGAGCTGAGGTTGGCCTCTGAATAG  650

seq1  TCCTGTATGAGGGGGTTGCTAAGACCACTCATTGGATAACAATTACCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTATGAGGGGGTTGCTAAGACCACTCATTGGATAACAATTACCCAA  700

seq1  CTGCACAAACCCAGAGACCAGAACTCTATCCTCAGAACACACATAAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAAACCCAGAGACCAGAACTCTATCCTCAGAACACACATAAAGGT  750

seq1  GGAAAAAGAGAGCCAACTCCACAGAGCTGTTCCCTGACTTCCTCACTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAGAGCCAACTCCACAGAGCTGTTCCCTGACTTCCTCACTCCC  800

seq1  ACTGTGCAACTCTGAGCACAATAATAAACAAATTACAAGAAG-CACA-CA  848
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  ACTGTGCAACTCTGAGCACAATAATAAACAAATTACAAGAAGCCACACCA  850

seq1  AATGACTACTACACTTTTGAAGAAAAAAAGTCTATCCTTAGCAGAAATCA  898
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTACTACACTTTTGAAGAAAAAAAGTCTATCCTTAGCAGAAATCA  900

seq1  AAGACATTCAGTTAAAAATAATAAAGAT-GGCCT-GGGGATGTAA-CTCA  945
      ||||||||||||| |||||||||||||| ||||| |||||||||| ||||
seq2  AAGACATTCAGTTTAAAATAATAAAGATGGGCCTGGGGGATGTAACCTCA  950

seq1  GTTGGCAGAATGC--TTGCTTTGAAATTTTGAGGCCTCAGGTTTGCCC--  991
      |||||||||||||  | ||||||||||||||||||||||| |||||||  
seq2  GTTGGCAGAATGCCTTGGCTTTGAAATTTTGAGGCCTCAGTTTTGCCCCC  1000

seq1  -TCAG-CACAACCTAAAAACAGAAATGGT--AGTATACAT-CTTTAATCG  1036
        ||| ||| | |||||||||||||||||   |||||||| |||||||||
seq2  TCCAGCCACCATCTAAAAACAGAAATGGTTAGGTATACATCCTTTAATCG  1050

seq1  A-GGCACTT  1044
      | |||||||
seq2  AGGGCACTT  1059