BAC Information

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BAC

Clone NameB6Ng01-193N14
Chromosome14 (Build37)
Map Location 85,510,368 - 85,511,479
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
Downstream geneLOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193N14.bB6Ng01-193N14.g
ACCGA016702GA016703
length1,2251,105
definitionB6Ng01-193N14.b B6Ng01-193N14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagtggagatgctgtgacaggcaaggccctgattgtggcatt
attccatcccttggctccttagctagctttacactaatttgaacaaatcg
gatgctattcttagtgccttcattgaataaatcaattaaactaagtttaa
tttagataatcttgcttccaaaaaagaaatcaattgccagaaaatcatgt
gtgtacaatggttatactgaaattatgaaaatgtaatatatagagtggtt
gctctgaaaccaagtaaaggttataggagggccaacttatgtaaagcatc
attgatgatctaggaaagaacaaaagtgcacaacacctaccattctcctc
aaaaactgaagatgtgcctaaaagagttctaaccgtgaataatgccattt
acaacaaatgtaactcactttgtaggtctgtttggggaggagggaatgtc
catatgtggaggacatggaaaacattaggaatttcattacctatctttct
ttctttcttttttttttccttgtgaacttaaaacttctctaaaatctaag
tatttgactccagcccagggcttcctggccagcggagttgcctgacaccc
gcaagggcccacacaggattccccacaggatcctaagacctctggtgagt
ggaacacagcgccgcccccaatccaatcgcgcggaacctgagactgtggt
acatagggaagcagactgcccgggcctgacccggggcaaaagccccttcc
gctccactcgagccccgggcttcctggccagcggagttgcctgacacctg
caagggcccacacaggattccccacgggatcctaagacccctagtgagtg
gaacacaacttctgccaaggagtccggtttgaacaccagatatctgggta
ccttccctgcaagaaggagagctttccttgcagagaaatactctacccac
ttgaaccaatgagagtgctacccttcccaggttctgcttataggaggctt
acagagtcacagctcttaacagagactaacttataaggctagcttcatag
agataccagatggccgaaaggcaacttagaattctactaaacgaaatcaa
gaacacttagcatcatcagacgcagcacttcaaatccaccttgtcctggt
caactcgactatcgtaatctggaatcgaatgatagacatttttctagatg
tagatgtacagtagcgacatctcag
gaattcatatacttttattctgtctcttcttagaaaacaaagaaacatct
aaaatataataataaaagaaaacaaacagaaataggacaaagcaaaaaac
acataactagaagccataatacatacttgatggacttgtaaagaattttc
ttttgttaaggaagtcatttgcttgcataatgaagttgaaaataatcctc
aggtatccaagctcactgaagtattttctactaagaactcaacaaaaagt
cacatacatgtctttacttatctactaattaaaatctgttgctgaaaata
tcaaactgaattaaaccatatgaacagaagaatgcattttctcaaaggag
aaaaacatctggacaatataacttcttccactatctacaattatgtcctc
aatccttactaattctaattcaaattaaaataatatcttaattctatagc
tgtatcatcacattctatggaaatttacaacatgaatgcctgtatgaaat
tttaattgcattccagtttttacaagtttttactagttatttagtttatt
tacatttcaaatgatatatcccttcctgcttccccctccacaaacccact
atcccaccccactccctgcttctaagagggtgctccagggaccatttacc
tactcccacctcacagccctagcattctcctatgctggggcattcaacct
tcacaggaccaagggtctccctttcattgctgctagataaggcaagcctc
tgctacatatgcagctggaacctccatgagtacactttggatggtgattt
agtccctggcagctctgcggtatctgcttggttgataatgttgttcttcc
tacgtgtttgcaaaccctttcagctccttccaatccatttttaaatatct
ttctcttctatgatttcgttcctttccaaccttcagatatatagtatcat
tttcaataatttctaataaccctgaccattactagtctgccaccagggcc
acttccagcgttcttcaattcacattttttaatgtctatgtgacacttga
tcacattttacaaaggataagcaaatcttcaatctgttattcaattaatt
tgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85510368_85511479
seq2: B6Ng01-193N14.g_64_1168

seq1  GAATTCATATACTTTTATTCTGTCTCTTCTTAGAAAACAAAGAAACATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATACTTTTATTCTGTCTCTTCTTAGAAAACAAAGAAACATCT  50

seq1  AAAATATAATAATAAAAGAAAACAAACAGAAATAGGACAAAGCAAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAATAATAAAAGAAAACAAACAGAAATAGGACAAAGCAAAAAAC  100

seq1  ACATAACTAGAAGCCATAATACATACTTGATGGACTTGTAAAGAATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTAGAAGCCATAATACATACTTGATGGACTTGTAAAGAATTTTC  150

seq1  TTTTGTTAAGGAAGTCATTTGCTTGCATAATGAAGTTGAAAATAATCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAGGAAGTCATTTGCTTGCATAATGAAGTTGAAAATAATCCTC  200

seq1  AGGTATCCAAGCTCACTGAAGTATTTTCTACTAAGAACTCAACAAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATCCAAGCTCACTGAAGTATTTTCTACTAAGAACTCAACAAAAAGT  250

seq1  CACATACATGTCTTTACTTATCTACTAATTAAAATCTGTTGCTGAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATGTCTTTACTTATCTACTAATTAAAATCTGTTGCTGAAAATA  300

seq1  TCAAACTGAATTAAACCATATGAACAGAAGAATGCATTTTCTCAAAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGAATTAAACCATATGAACAGAAGAATGCATTTTCTCAAAGGAG  350

seq1  AAAAACATCTGGACAATATAACTTCTTCCACTATCTACAATTATGTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATCTGGACAATATAACTTCTTCCACTATCTACAATTATGTCCTC  400

seq1  AATCCTTACTAATTCTAATTCAAATTAAAATAATATCTTAATTCTATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTACTAATTCTAATTCAAATTAAAATAATATCTTAATTCTATAGC  450

seq1  TGTATCATCACATTCTATGGAAATTTACAACATGAATGCCTGTATGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATCACATTCTATGGAAATTTACAACATGAATGCCTGTATGAAAT  500

seq1  TTTAATTGCATTCCAGTTTTTACAAGTTTTTACTAGTTATTTAGTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGCATTCCAGTTTTTACAAGTTTTTACTAGTTATTTAGTTTATT  550

seq1  TACATTTCAAATGATATATCCCTTCCTGCTTCCCCCTCCACAAACCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCAAATGATATATCCCTTCCTGCTTCCCCCTCCACAAACCCACT  600

seq1  ATCCCACCCCACTCCCTGCTTCTAAGAGGGTGCTCCAGGGACCATTTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCCCACTCCCTGCTTCTAAGAGGGTGCTCCAGGGACCATTTACC  650

seq1  TACTCCCACCTCACAGCCCTAGCATTCTCCTATGCTGGGGCATTCAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCACCTCACAGCCCTAGCATTCTCCTATGCTGGGGCATTCAACCT  700

seq1  TCACAGGACCAAGGGTCTCCCTTTCATTGCTGCTAGATAAGGCAAGCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGACCAAGGGTCTCCCTTTCATTGCTGCTAGATAAGGCAAGCCTC  750

seq1  TGCTACATATGCAGCTGGAACCTCCATGAGTACACTTTGGATGGTGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATATGCAGCTGGAACCTCCATGAGTACACTTTGGATGGTGATTT  800

seq1  AGTCCCTGGCAGCTCTGCGGTATCTGCTTGGTTGATAATGTTGTTCTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGGCAGCTCTGCGGTATCTGCTTGGTTGATAATGTTGTTCTTCC  850

seq1  TACGTGTTTGCAAACCCTTTCAGCTCCTTCCAATCCATTTTTAAATATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGTTTGCAAACCCTTTCAGCTCCTTCCAATCCATTTTTAAATATCT  900

seq1  TTCTCTTCTATGATTTCGTTCCTTTCCAACCTTCAAGATATATAAGTATC  950
      |||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  TTCTCTTCTATGATTTCGTTCCTTTCCAACCTTC-AGATATAT-AGTATC  948

seq1  ATTTTCAATAATTTCT-ATAACCCTGACCATTACTAGTCTGCCACCAGGC  999
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  ATTTTCAATAATTTCTAATAACCCTGACCATTACTAGTCTGCCACCAGGG  998

seq1  CCACTTCCAGCGTTCTTCAAATTCACATTTTTTAAATGTCTAATGTGACA  1049
      |||||||||||||||||| |||||||||||||| ||||||| ||||||||
seq2  CCACTTCCAGCGTTCTTC-AATTCACATTTTTT-AATGTCT-ATGTGACA  1045

seq1  CTTGATCACATTTTACAAAAGATAAACCAAATCTCCATTCTGTTTATTCA  1099
      ||||||||||||||||||| ||| || ||||||| || |||| |||||||
seq2  CTTGATCACATTTTACAAAGGAT-AAGCAAATCTTCAATCTG-TTATTCA  1093

seq1  ATTAATTTTGAGG  1112
      ||||| |||||||
seq2  ATTAA-TTTGAGG  1105