BAC Information

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BAC

Clone NameB6Ng01-194D06
Chromosome14 (Build37)
Map Location 105,164,233 - 105,331,402
singlet/doubletdoublet
Overlap genenone
Upstream geneEdnrb, Pou4f1, 2610206B13Rik, D130009I18Rik
Downstream geneLOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194D06.bB6Ng01-194D06.g
ACCGA016961GA016962
length2511,122
definitionB6Ng01-194D06.b B6Ng01-194D06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,164,233 - 105,164,483)(105,330,284 - 105,331,402)
sequence
ttgccctgtgtgaaccaagagttgctggtttcattgttatatatgctata
ttaaaacctttacaaatctcaagaagatatttgccccaattttggctgat
atgagataaacattttactatcaagtcattgtcccataaattgtatttct
ttcaacctgatctactgaactgtgtgacaaaaagaaagaagaaatgaaaa
cagagaaaagaaaaggagagaggagaggagaggagaggagaggagaggag
a
gaattccatggaaagttgtgatagtttcactgacaggtttgtgtgaatgc
aaagaagctctacagtagctgcaagggggaaatgttcacaaacgcctcta
aattacacgagttaaattatcagaagagaaaaatatagtaatattaagat
tattggaataagagttgattgattacagtcattcattaagcaataacaaa
cacctagtctttctaatgttctacaggctttaaaatttgtatgtggtttg
gacagaatacctgtaactgattccccttcttctttttttattggttattt
tatttatttatgtttcaaatgttgtctcccttcccggtttcccctcctcc
attccctcctgcttctatgagggtgcttccccgtctactcccccctcact
gccttagcattcctctatattgaggcatcgagccttcacaggaccaagtg
cctcccctcccactgatgccaaataaggcaatcctctgctacatatgcag
ctggagccatgggtccctccatgtgaactctttggttggtggtttagtcc
ctgggagctctggggttctggttagttgttatagttcttcttcctatggg
gttgcaatccccttcagctctctcagtcctcctaactcttccattcgggg
tccctatgttcagtctgatggttggctgtgggcatctgcatccgttttgg
ccagactccggcagagcctctaaggggacagctataccaggcttttgcca
gcaagtgcttcttggcatcagcaatagtgtctgggtttggtgtctgcaga
taggatggattcctaggtgggacagccctctggatggtctttccttcagt
ctccgtttcagttttttctgtctttcctttagacaggaacaattctggga
ttaaattttttgagatggataggtggctgactcccctatattgcatccat
aatggtctcataatgaagacaagttgtaaattagttagtatacagaaagc
tgctagattatataatatatactaataaactataagatatttaacaacca
gcaacaatatatttttgaattattagatacattagttaactcctcacagt
attactacaactggagatatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105164233_105164483
seq2: B6Ng01-194D06.b_51_301

seq1  TTGCCCTGTGTGAACCAAGAGTTGCTGGTTTCATTGTTATATATGCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTGTGTGAACCAAGAGTTGCTGGTTTCATTGTTATATATGCTATA  50

seq1  TTAAAACCTTTACAAATCTCAAGAAGATATTTGCCCCAATTTTGGCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCTTTACAAATCTCAAGAAGATATTTGCCCCAATTTTGGCTGAT  100

seq1  ATGAGATAAACATTTTACTATCAAGTCATTGTCCCATAAATTGTATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATAAACATTTTACTATCAAGTCATTGTCCCATAAATTGTATTTCT  150

seq1  TTCAACCTGATCTACTGAACTGTGTGACAAAAAGAAAGAAGAAATGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCTGATCTACTGAACTGTGTGACAAAAAGAAAGAAGAAATGAAAA  200

seq1  CAGAGAAAAGAAAAGGAGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAAGAAAAGGAGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAG  250

seq1  A  251
      |
seq2  A  251

seq1: chr14_105330284_105331402
seq2: B6Ng01-194D06.g_66_1187 (reverse)

seq1  TCATATCTCCAGTTGT-GATATACTGTG-GGAGTTTACTAATGTATCTAA  48
      |||||||||||||||| |  |||||||| |||||| ||||||||||||||
seq2  TCATATCTCCAGTTGTAGTAATACTGTGAGGAGTTAACTAATGTATCTAA  50

seq1  TAATTTATAAATATAATTGTTG-TTGTTGTTAAATATCTAATAGTTTATT  97
      ||||| | |||||| ||||||| | |||||||||||||| ||||||||||
seq2  TAATTCAAAAATAT-ATTGTTGCTGGTTGTTAAATATCTTATAGTTTATT  99

seq1  AGTATATATTATAT-ATCTAGCAGCTTTCTGTATACTAACTAATTTACAA  146
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTATATATTATATAATCTAGCAGCTTTCTGTATACTAACTAATTTACAA  149

seq1  CCTTGTCTTCATTATGAGACCATTATGGATGCATTATAGGGGGAGTCAGC  196
       |||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  -CTTGTCTTCATTATGAGACCATTATGGATGCAATATA-GGGGAGTCAGC  197

seq1  CACCTATCCATCTCAAAAAATTTAAT-CCAGAATTGTTCCTGTCTAAAGG  245
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CACCTATCCATCTCAAAAAATTTAATCCCAGAATTGTTCCTGTCTAAAGG  247

seq1  AAAGACAGAAAAAACTGGAACGGAGACTGAAGGAAAGACCATCCAGA-GG  294
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  AAAGACAGAAAAAACTGAAACGGAGACTGAAGGAAAGACCATCCAGAGGG  297

seq1  CTGTCCCACCTAGGAATCCATCCTATCTGCAGACACCAAACCCAGACACT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCACCTAGGAATCCATCCTATCTGCAGACACCAAACCCAGACACT  347

seq1  ATTGCTGATGCCAAGAAGCACTTGCTGGCAAAAGCCTGGTATAGCTGTCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGATGCCAAGAAGCACTTGCTGGCAAAAGCCTGGTATAGCTGTCC  397

seq1  CCTTAGAGGCTCTGCCGGAGTCTGGCCAAAACGGATGCAGATGCCCACAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAGGCTCTGCCGGAGTCTGGCCAAAACGGATGCAGATGCCCACAG  447

seq1  CCAACCATCAGACTGAACATAGGGACCCCGAATGGAAGAGTTAGGAGGAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCATCAGACTGAACATAGGGACCCCGAATGGAAGAGTTAGGAGGAC  497

seq1  TGAGAGAGCTGAAGGGGATTGCAACCCCATAGGAAGAAGAACTATAACAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGCTGAAGGGGATTGCAACCCCATAGGAAGAAGAACTATAACAA  547

seq1  CTAACCAGAACCCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGAACCCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAGTT  597

seq1  CACATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATTGCCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGATTGCCT  647

seq1  TATTTGGCATCAGTGGGAGGGGAGGCACTTGGTCCTGTGAAGGCTCGATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCATCAGTGGGAGGGGAGGCACTTGGTCCTGTGAAGGCTCGATG  697

seq1  CCTCAATATAGAGGAATGCTAAGGCAGTGAGGGGGGAGTAGACGGGGAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATATAGAGGAATGCTAAGGCAGTGAGGGGGGAGTAGACGGGGAAG  747

seq1  CACCCTCATAGAAGCAGGAGGGAATGGAGGAGGGGAAACCGGGAAGGGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCATAGAAGCAGGAGGGAATGGAGGAGGGGAAACCGGGAAGGGAG  797

seq1  ACAACATTTGAAACATAAATAAATAAAATAACCAATAAAAAAAGAAGAAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTTGAAACATAAATAAATAAAATAACCAATAAAAAAAGAAGAAG  847

seq1  GGGAATCAGTTACAGGTATTCTGTCCAAACCACATACAAATTTTAAAGCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCAGTTACAGGTATTCTGTCCAAACCACATACAAATTTTAAAGCC  897

seq1  TGTAGAACATTAGAAAGACTAGGTGTTTGTTATTGCTTAATGAATGACTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACATTAGAAAGACTAGGTGTTTGTTATTGCTTAATGAATGACTG  947

seq1  TAATCAATCAACTCTTATTCCAATAATCTTAATATTACTATATTTTTCTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATCAACTCTTATTCCAATAATCTTAATATTACTATATTTTTCTC  997

seq1  TTCTGATAATTTAACTCGTGTAATTTAGAGGCGTTTGTGAACATTTCCCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATAATTTAACTCGTGTAATTTAGAGGCGTTTGTGAACATTTCCCC  1047

seq1  CTTGCAGCTACTGTAGAGCTTCTTTGCATTCACACAAACCTGTCAGTGAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGCTACTGTAGAGCTTCTTTGCATTCACACAAACCTGTCAGTGAA  1097

seq1  ACTATCACAACTTTCCATGGAATTC  1119
      |||||||||||||||||||||||||
seq2  ACTATCACAACTTTCCATGGAATTC  1122