BAC Information

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BAC

Clone NameB6Ng01-195A09
Chromosome14 (Build37)
Map Location 82,009,493 - 82,130,655
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195A09.bB6Ng01-195A09.g
ACCGA017558GA017559
length1,0781,087
definitionB6Ng01-195A09.b B6Ng01-195A09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,129,582 - 82,130,655)(82,009,493 - 82,010,571)
sequence
gaattcttgacttggcttccattgaatgaggggctatgtcttttaaacca
aataaatgttttcatttccatattatttttagctagtgtttactaaatca
acagaaatcaaagtggggcagcttctatggaggagagaaggaaaccctat
tgaagggcactcgattacttttatacctgtagaacagaactaaattccac
tctctctctctctctctctctctctctctctctctctctctctctctttt
actggatattcaaaatttttgaacattcaaataagaacattttatcttct
cacactatctctgaaaattatacatgtccatgataaatgaaaaagtatgg
aattcgtgaaattgttttacacgttctgcatgcattaaaaatcccccctt
agagtgtattaatggtattaatctaaatactctggaaattgttcagttcc
agaggaatccattttgctgagttgtccaattaacacagtttataagattg
tcaaacttctccaaatactacaaaagaaaagctctttttagtcaaaagaa
tctcaagaataagttcaacattttttttttcaaaaatagcttccatcctt
atccatatttatcacctgccatttgtgcatttttgtcactctgaagcttt
tggatagtatgctatcatttatcatttattacctctgtcatctcttttgc
tattgacagcacactcatgtatcaaaggagcaaatgctccacatggctcc
atgcgcgaatgtacaaataccactcacctgatagctattttctttccaaa
actattgatttccatctctgaactttatccagtgtcccatgataatagtg
acagcatactgattctgttcaatgaatggagttgttagcccagagaatac
aagtcatcgctggccttgcattgtattgacagttgattcaggcttgcccg
aagatgacgaacgtgtgacatgactaattcccagtgcagcacaaaactac
tgcttataatttatagttacagtagcactaaattaaactttcagacactt
ggttgctaaagaaactatgcagattatc
gaattctcatgatgcacagcctgaggaataagcaagatctgtgcccagag
acacatatggaataaatcatcaaagatctttttatgaagatatatttgtg
ggttttatataaatcataagatttatttatattgaacaaatcacttttat
gctactgagagaaagtctctactattatatttggtagtttaaaacatggc
tgcaggtgtaatgttatgaggaataactctttaagcatttgtctaaacat
aaatgagtagttaatatggatggttaagaataatttcagattttgctgat
gtgtggaaaatatactagctcttatttgttaactttgcttttaagaaaat
actccagaaatacagatgataaatggcagagactgacataaactcctata
caagttatttccagatgtttttaggaaagtttcaaatagaaggatagttt
ttaattgcaattcacattataaattgaaagtatggtattcataatgcttc
aaatgagctagtgatgtttatgactgcaaaaatagcttgctccttacatg
agagtctagcggttttaaggttttatttggtggtctcaagaactagaggt
aaataaaatcagagaggcatgacatcagtatagaaagttcaatctgtcct
ttcaactcaatgaaaaaaatgaatatggaaggaaatactaagagaaaaca
cttgataagtataaatacaggatgaaatactgataaacacacttcaatgt
gcaaaatgcatgggataagaaaaagttaaataatataggcttaaaggtta
atatcataaaaataaaataaattaaaataaaataaaaaagcttgcacata
gaaataaagtgtatcactcccttttaaactgtaggaaacagaaggacaca
caatgcatggggcttataaatgacttgactaaagaacaataatgatgaca
gacattgatgcctgttataacaggtgaaaggatattgtgatcattgccag
caaatgatgatattttccaggaagatatatagggtagtgttttctagcct
cccacctatacttgcctaatagtaataggggaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82129582_82130655
seq2: B6Ng01-195A09.b_46_1123 (reverse)

seq1  GATAGTCTGCATAGTTTTCTATACCA--CAGGTGTCTTAAAGTATAAATA  48
      |||| ||||||||| ||||| || ||  || |||||| ||||| ||| | 
seq2  GATAATCTGCATAG-TTTCTTTAGCAACCAAGTGTCTGAAAGTTTAATTT  49

seq1  TGTGACACTGTAAC-ATAAA-TAGTAGCAGTAGTATTTGTGATGAACTAG  96
       |||  |||||||| ||||| ||  ||||||||| |||||| || ||| |
seq2  AGTGCTACTGTAACTATAAATTATAAGCAGTAGT-TTTGTGCTGCACTGG  98

seq1  GAATTAGTCATGTCACACATTCCTCATCTTTCTGGGCAGCCTGAATCAAC  146
      |||||||||||||||||| ||| ||||| ||| ||  |||||||||||||
seq2  GAATTAGTCATGTCACACGTTCGTCATC-TTCGGGCAAGCCTGAATCAAC  147

seq1  TGTCAATACAATGAAAGGCCA-CCATGACTGGAATTCTCTTGGCTAAC-A  194
      ||||||||||||| ||||||| | |||||| | ||||||| ||||||| |
seq2  TGTCAATACAATGCAAGGCCAGCGATGACTTGTATTCTCTGGGCTAACAA  197

seq1  CTCCATTCATTGAACAG-ATCAGTATACTGTCACTATTATCATGGGACAC  243
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  CTCCATTCATTGAACAGAATCAGTATGCTGTCACTATTATCATGGGACAC  247

seq1  TTGGATAAAGTTCAGAGATGGAAATCAATAGTTTTGGAAAG-AAATAGCT  292
       |||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  -TGGATAAAGTTCAGAGATGGAAATCAATAGTTTTGGAAAGAAAATAGCT  296

seq1  ATCAGGTGAGTGGTATTTGGTACATTC-CCCATGGAGCCATGTGGAGCAT  341
      |||||||||||||||||| |||||||| | ||||||||||||||||||||
seq2  ATCAGGTGAGTGGTATTT-GTACATTCGCGCATGGAGCCATGTGGAGCAT  345

seq1  TTGCTCCTTTGATTCACTGAGTGTTCTGTCAATAGCAAAAGAGATAACAG  391
      ||||||||||||| || ||||||| |||||||||||||||||||| ||||
seq2  TTGCTCCTTTGATACA-TGAGTGTGCTGTCAATAGCAAAAGAGATGACAG  394

seq1  AGGTAATAAATGATAAATGATAGCATACTATCCAAAAGCTTCAGAGTGAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATAAATGATAAATGATAGCATACTATCCAAAAGCTTCAGAGTGAC  444

seq1  -AAAATGCACAAATGGCAGGTGATAAATATGGATAAGGATGGAAGCTATT  490
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCACAAATGGCAGGTGATAAATATGGATAAGGATGGAAGCTATT  494

seq1  TTTGAAAAAAAAAATGTTGAACTTATTCTTGAGATTCTTTTGACTAAAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAAAAAAATGTTGAACTTATTCTTGAGATTCTTTTGACTAAAAA  544

seq1  GAGCTTTTCTTTTGTAGTATTTGGAGAAGTTTGACAATCTTATAAACTGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTTCTTTTGTAGTATTTGGAGAAGTTTGACAATCTTATAAACTGT  594

seq1  GTTAATTGGACAACTCAGCAAAATGGATTCCTCTGGAACTGAACAATTTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTGGACAACTCAGCAAAATGGATTCCTCTGGAACTGAACAATTTC  644

seq1  CAGAGTATTTAGATTAATACCATTAATACACTCTAAGGGGGGATTTTTAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTATTTAGATTAATACCATTAATACACTCTAAGGGGGGATTTTTAA  694

seq1  TGCATGCAGAACGTGTAAAACAATTTCACGAATTCCATACTTTTTCATTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCAGAACGTGTAAAACAATTTCACGAATTCCATACTTTTTCATTT  744

seq1  ATCATGGACATGTATAATTTTCAGAGATAGTGTGAGAAGATAAAATGTTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGACATGTATAATTTTCAGAGATAGTGTGAGAAGATAAAATGTTC  794

seq1  TTATTTGAATGTTCAAAAATTTTGAATATCCAGTAAAAGAGAGAGAGAGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAATGTTCAAAAATTTTGAATATCCAGTAAAAGAGAGAGAGAGA  844

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGAATTTAGTTCTG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGAATTTAGTTCTG  894

seq1  TTCTACAGGTATAAAAGTAATCGAGTGCCCTTCAATAGGGTTTCCTTCTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGGTATAAAAGTAATCGAGTGCCCTTCAATAGGGTTTCCTTCTC  944

seq1  TCCTCCATAGAAGCTGCCCCACTTTGATTTCTGTTGATTTAGTAAACACT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATAGAAGCTGCCCCACTTTGATTTCTGTTGATTTAGTAAACACT  994

seq1  AGCTAAAAATAATATGGAAATGAAAACATTTATTTGGTTTAAAAGACATA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAAATAATATGGAAATGAAAACATTTATTTGGTTTAAAAGACATA  1044

seq1  GCCCCTCATTCAATGGAAGCCAAGTCAAGAATTC  1074
      ||||||||||||||||||||||||||||||||||
seq2  GCCCCTCATTCAATGGAAGCCAAGTCAAGAATTC  1078

seq1: chr14_82009493_82010571
seq2: B6Ng01-195A09.g_63_1149

seq1  GAATTCTCATGATGCACAGCCTGAGGAATAAGCAAGATCTGTGCCCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGATGCACAGCCTGAGGAATAAGCAAGATCTGTGCCCAGAG  50

seq1  ACACATATGGAATAAATCATCAAAGATCTTTTTATGAAGATATATTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATGGAATAAATCATCAAAGATCTTTTTATGAAGATATATTTGTG  100

seq1  GGTTTTATATAAATCATAAGATTTATTTATATTGAACAAATCACTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTATATAAATCATAAGATTTATTTATATTGAACAAATCACTTTTAT  150

seq1  GCTACTGAGAGAAAGTCTCTACTATTATATTTGGTAGTTTAAAACATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGAGAGAAAGTCTCTACTATTATATTTGGTAGTTTAAAACATGGC  200

seq1  TGCAGGTGTAATGTTATGAGGAATAACTCTTTAAGCATTTGTCTAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGTAATGTTATGAGGAATAACTCTTTAAGCATTTGTCTAAACAT  250

seq1  AAATGAGTAGTTAATATGGATGGTTAAGAATAATTTCAGATTTTGCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTAGTTAATATGGATGGTTAAGAATAATTTCAGATTTTGCTGAT  300

seq1  GTGTGGAAAATATACTAGCTCTTATTTGTTAACTTTGCTTTTAAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAAAATATACTAGCTCTTATTTGTTAACTTTGCTTTTAAGAAAAT  350

seq1  ACTCCAGAAATACAGATGATAAATGGCAGAGACTGACATAAACTCCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAAATACAGATGATAAATGGCAGAGACTGACATAAACTCCTATA  400

seq1  CAAGTTATTTCCAGATGTTTTTAGGAAAGTTTCAAATAGAAGGATAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTATTTCCAGATGTTTTTAGGAAAGTTTCAAATAGAAGGATAGTTT  450

seq1  TTAATTGCAATTCACATTATAAATTGAAAGTATGGTATTCATAATGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGCAATTCACATTATAAATTGAAAGTATGGTATTCATAATGCTTC  500

seq1  AAATGAGCTAGTGATGTTTATGACTGCAAAAATAGCTTGCTCCTTACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGCTAGTGATGTTTATGACTGCAAAAATAGCTTGCTCCTTACATG  550

seq1  AGAGTCTAGCGGTTTTAAGGTTTTATTTGGTGGTCTCAAGAACTAGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTAGCGGTTTTAAGGTTTTATTTGGTGGTCTCAAGAACTAGAGGT  600

seq1  AAATAAAATCAGAGAGGCATGACATCAGTATAGAAAGTTCAATCTGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATCAGAGAGGCATGACATCAGTATAGAAAGTTCAATCTGTCCT  650

seq1  TTCAACTCAATGAAAAAAATGAATATGGAAGGAAATACTAAGAGAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCAATGAAAAAAATGAATATGGAAGGAAATACTAAGAGAAAACA  700

seq1  CTTGATAAGTATAAATACAGGATGAAATACTGATAAACACACTTCAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAAGTATAAATACAGGATGAAATACTGATAAACACACTTCAATGT  750

seq1  GCAAAATGCATGGGATAAGAAAAAGTTAAATAATATAGGCTT-AAGGTTA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCAAAATGCATGGGATAAGAAAAAGTTAAATAATATAGGCTTAAAGGTTA  800

seq1  ATATCATAAAAATAAAATAAATTAAAATAAAATAAAAAAGCTTGCACATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAAAAATAAAATAAATTAAAATAAAATAAAAAAGCTTGCACATA  850

seq1  GAAATAAAGTGTATCACTCCCTTTTAAACTGTAGGAAACAGAAGGACACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGTGTATCACTCCCTTTTAAACTGTAGGAAACAGAAGGACACA  900

seq1  CAATGCATGGGGCTTATAAATGACTTGACTAAAGAACAATAATGATGACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCATGGGGCTTATAAATGACTTGACTAAAGAACAATAATGATGACA  950

seq1  GACATTGATGCCTGTTATAACAGGTGAAA-GATAATGTGATCATTTGCAG  998
      ||||||||||||||||||||||||||||| |||| ||||||||||  |||
seq2  GACATTGATGCCTGTTATAACAGGTGAAAGGATATTGTGATCATTGCCAG  1000

seq1  CAAATGATGATATTTT-CAGG-AGATATATAGGTTAGTGTTTTCTAGGCT  1046
      |||||||||||||||| |||| ||||||||||| ||||||||||||| ||
seq2  CAAATGATGATATTTTCCAGGAAGATATATAGGGTAGTGTTTTCTAGCCT  1050

seq1  CC--ACTATACTTG-CTAATAGTAATAGGGG-ATATG  1079
      ||   ||||||||| |||||||||||||||| |||||
seq2  CCCACCTATACTTGCCTAATAGTAATAGGGGAATATG  1087