BAC Information

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BAC

Clone NameB6Ng01-195J19
Chromosome14 (Build37)3 (Build37)
Map Location 36,721,210 - 36,721,742137,052,296 - 137,053,400
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277
Downstream geneLOC665933, 4930474N05Rik, Gcap14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195J19.bB6Ng01-195J19.g
ACCGA017986GA017987
length9721,119
definitionB6Ng01-195J19.b B6Ng01-195J19.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(36,721,210 - 36,721,742)(137,052,296 - 137,053,400)
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattgggtattagtccc
ttatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
gtttgtcttattgacagtgtcttttgccttgcagaagctttgcaatttta
tgaggtcctatttgtcgattctcaatcttacagcacagggaatggatgtt
ctattcaggaatttttcccctatacccatatcttcaaggctttttcctac
tttctcctttataagtttcagtgtctctggttttatgtggcgttccttga
tcgacttagatttgaccttagtacaaggagataggaatggatcaatttgc
attcttctacaggataaccaccagttgtgccagcaccatttgttgaaaat
gctcttttctactggatagttttagcgcacttgtcaaagatcaagtgacc
atagatgtgtgggttcatttctgggtcttcaattctattccattggtcta
cttgtctgtcgctataccagtaccatgcagtttttatcacaattgctctg
tagtaaagctttaggtcaggcagggtgattacaccagaggttcttttatt
cttgagcagagtttttgctatcctaggttttttgttattccagatgaatt
tgcagattgccctttctaattcgttgaagaattgagttggaattttgatg
gggattgcatttgaatctgtagattgcttttggcaagatagccattttta
ctatattgatcctgcccatccatgagcaatgggagatcttcccatattct
gagatcttctttaaatttctttcttcagagactttaaagtttcttatcat
tacagatctttcacttccttaagtagagtccacgtcaagatatttttata
tattgtgactattgaagaaggg

gaattctcctggatttctctatcttttaatgtttattcttttaaattcta
ggacttttaaaataatttttattgctaaataattcccatagcatacaatt
tgtccatttcaattcagcagttatgagtccaagcattcatttttacatat
attttgcaattccgtacacatagacaatgtgtgatcatattcattgcccc
atgaactttattatttctcaccctcatttgccctgttttgctaccccaac
tagtccctgcctactttcatcatgtcctttttagtcttttaagttcttca
ttggcattgtattcattaaatttccttgagatatgctggtggatatattt
gtcccttttaagagcaccttactgccatgttttatgatagtcctgtgcac
ctacaatgagattggatgtctgagaaatcatttatatctaacacttttat
aaggcagccatatcaacaagctgacttcttataatgggaaggtataagat
tgtaatacagtgaagttgattactgctagctagacaccatgtgtcatctc
catacaggagatatctgtctctttaatgaccctatgtagagtgggtagca
tgaaagaatcagagaactactggctgtttggaaaaattcatagtgagaca
ctcttaagtgttctgcagatgtggtgtggacagcagtgtgtataacttca
ttgggtgtccagttacacaatgggagtggctaccttacctagtgatggag
attccctcaggcactgtcaatggcaatccagccactagcaagggcctctg
gtatgggtggtctaggtgtgataatgatcccaaagcatttatcatctgtc
cagtcagtggtccaaggtagatgttacatggggggcaagacagcaccctt
cgcttacactattgaagacctcagtcaaggaggattttaattgttccatt
ttaagatcatctgaagagttcttatcgaacagtttttgaagtggaacttc
tcttatgacattcccaatcactgtactgagatgtttggtggggaatagct
tgtgtgttgtcttccaattctcaaggtgatcgatttgcacgtggggacgg
aagggggtggcatctttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36721210_36721742
seq2: B6Ng01-195J19.b_484_1020 (reverse)

seq1  CCCTTC-TCAATAGTCACAAATAATATAAAATATCTTGGCGT-GACTCTA  48
      |||||| |||||||||||||   ||| ||||||||||| ||| |||||||
seq2  CCCTTCTTCAATAGTCACAATATATA-AAAATATCTTGACGTGGACTCTA  49

seq1  ACTAAGGAAGTGAAAGAACTGT-ATGAAAAGAA--CTTCAAGTATATGAA  95
        ||||||||||||||| |||| |||| |||||   || |||| | ||||
seq2  CTTAAGGAAGTGAAAGATCTGTAATGATAAGAAACTTTAAAGTCTCTGAA  99

seq1  GAAAGAAA-TTAAAGAAGGTCTCAGAAGATGGAAAGATCTCCCA-TGCTC  143
      |||||||| ||||||||| |||||||| |||| ||||||||||| |||||
seq2  GAAAGAAATTTAAAGAAGATCTCAGAATATGGGAAGATCTCCCATTGCTC  149

seq1  ATGGATTGGCAGGATCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAA  193
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGGCAGGATCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAA  199

seq1  TCTACAGATTC-AATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAA  242
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGATTCAAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAA  249

seq1  CGAATTGGAAAGAACAATCTGCAAATTCATCTGGAATAACAAAGAACCTA  292
      |||||| |||||  ||||||||||||||||||||||||||||| ||||||
seq2  CGAATTAGAAAGGGCAATCTGCAAATTCATCTGGAATAACAAAAAACCTA  299

seq1  GGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACC  342
      |||||||||||||||| |||||| |||||||||||||||||| |||||||
seq2  GGATAGCAAAAACTCTGCTCAAGAATAAAAGAACCTCTGGTGTAATCACC  349

seq1  ATGCCTGACCTAAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATG  392
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATG  399

seq1  GTACTGGTATAGCGACAGACAAGTAGACCAGTGGAATAGAACTGAAGACC  442
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  GTACTGGTATAGCGACAGACAAGTAGACCAATGGAATAGAATTGAAGACC  449

seq1  CAGAAATGAACCCACACACCTATGGTCCCTTGATCTTTGACAAGGTAGCT  492
      |||||||||||||||||| |||||||| ||||||||||||||||   |||
seq2  CAGAAATGAACCCACACATCTATGGTCACTTGATCTTTGACAAGTGCGCT  499

seq1  AAAACCATCCAGTGGAAAAAGACAGCATTTTCAACAAACGG  533
      ||||| ||||||| ||||   | ||||||||||||||| ||
seq2  AAAACTATCCAGTAGAAA---AGAGCATTTTCAACAAATGG  537


seq1: chr3_137052296_137053400
seq2: B6Ng01-195J19.g_68_1186

seq1  GAATTCTCCTGGATTTCTCTATCTTTTAATGTTTATTCTTTTAAATTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGATTTCTCTATCTTTTAATGTTTATTCTTTTAAATTCTA  50

seq1  GGACTTTTAAAATAATTTTTATTGCTAAATAATTCCCATAGCATACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTAAAATAATTTTTATTGCTAAATAATTCCCATAGCATACAATT  100

seq1  TGTCCATTTCAATTCAGCAGTTATGAGTCCAAGCATTCATTTTTACATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATTTCAATTCAGCAGTTATGAGTCCAAGCATTCATTTTTACATAT  150

seq1  ATTTTGCAATTCCGTACACATAGACAATGTGTGATCATATTCATTGCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCAATTCCGTACACATAGACAATGTGTGATCATATTCATTGCCCC  200

seq1  ATGAACTTTATTATTTCTCACCCTCATTTGCCCTGTTTTGCTACCCCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTTATTATTTCTCACCCTCATTTGCCCTGTTTTGCTACCCCAAC  250

seq1  TAGTCCCTGCCTACTTTCATCATGTCCTTTTTAGTCTTTTAAGTTCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCTGCCTACTTTCATCATGTCCTTTTTAGTCTTTTAAGTTCTTCA  300

seq1  TTGGCATTGTATTCATTAAATTTCCTTGAGATATGCTGGTGGATATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTGTATTCATTAAATTTCCTTGAGATATGCTGGTGGATATATTT  350

seq1  GTCCCTTTTAAGAGCACCTTACTGCCATGTTTTATGATAGTCCTGTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTTAAGAGCACCTTACTGCCATGTTTTATGATAGTCCTGTGCAC  400

seq1  CTACAATGAGATTGGATGTCTGAGAAATCATTTATATCTAACACTTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATGAGATTGGATGTCTGAGAAATCATTTATATCTAACACTTTTAT  450

seq1  AAGGCAGCCATATCAACAAGCTGACTTCTTATAATGGGAAGGTATAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCCATATCAACAAGCTGACTTCTTATAATGGGAAGGTATAAGAT  500

seq1  TGTAATACAGTGAAGTTGATTACTGCTAGCTAGACACCATGTGTCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACAGTGAAGTTGATTACTGCTAGCTAGACACCATGTGTCATCTC  550

seq1  CATACAGGAGATATCTGTCTCTTTAATGACCCTATGTAGAGTGGGTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGAGATATCTGTCTCTTTAATGACCCTATGTAGAGTGGGTAGCA  600

seq1  TGAAAGAATCAGAGAACTACTGGCTGTTTGGAAAAATTCATAGTGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAATCAGAGAACTACTGGCTGTTTGGAAAAATTCATAGTGAGACA  650

seq1  CTCTTAAGTGTTCTGCAGATGTGGTGTGGACAGCAGTGTGTATAACTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGTGTTCTGCAGATGTGGTGTGGACAGCAGTGTGTATAACTTCA  700

seq1  TTGGGTGTCCAGTTACACAATGGGAGTGGCTACCTTACCTAGTGATGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGTCCAGTTACACAATGGGAGTGGCTACCTTACCTAGTGATGGAG  750

seq1  ATTCCCTCAGGCACTGTCAATGGCAATCCAGCCACTAGCAAGGGCCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCAGGCACTGTCAATGGCAATCCAGCCACTAGCAAGGGCCTCTG  800

seq1  GTATGGGTGGTCTAGGTGTGATAATGATCCCAAAGCATTTATCATCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGTGGTCTAGGTGTGATAATGATCCCAAAGCATTTATCATCTGTC  850

seq1  CAGTCAGTGGTCCAA-GTAGATGTTACAT-GGGGGCAAGACAGCACCC-T  897
      ||||||||||||||| ||||||||||||| |||||||||||||||||| |
seq2  CAGTCAGTGGTCCAAGGTAGATGTTACATGGGGGGCAAGACAGCACCCTT  900

seq1  CGCTTACACTATTGAAGACCTCAGTC-AGGAAGATTTTAA-TGTTCCATT  945
      |||||||||||||||||||||||||| |||| |||||||| |||||||||
seq2  CGCTTACACTATTGAAGACCTCAGTCAAGGAGGATTTTAATTGTTCCATT  950

seq1  TT-AGATCATCTGAGGAGTTCTTATCGAACAGTTTTTGAAGTGGAACTTC  994
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAAGATCATCTGAAGAGTTCTTATCGAACAGTTTTTGAAGTGGAACTTC  1000

seq1  TCTTATGACATTTCCCAAACAC-GTACTGAGATG-TTGGTGGGAAATAGC  1042
      |||||||||| ||||||| ||| ||||||||||| |||||||| ||||||
seq2  TCTTATGACA-TTCCCAATCACTGTACTGAGATGTTTGGTGGGGAATAGC  1049

seq1  -TGTGTG-TGTCTTCC-ATTCTCAA-GTGTTGAATCTGCAC-TTGGGACG  1087
       |||||| |||||||| |||||||| ||| |  || ||||| | ||||||
seq2  TTGTGTGTTGTCTTCCAATTCTCAAGGTGATCGATTTGCACGTGGGGACG  1099

seq1  GA--GGGTGGGCATCATTCC  1105
      ||  |||  |||||| ||||
seq2  GAAGGGGGTGGCATCTTTCC  1119


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