BAC Information

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BAC

Clone NameB6Ng01-195K02
Chromosome14 (Build37)
Map Location 3,101,798 - 3,301,743
singlet/doubletdoublet
Overlap geneLOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682
Downstream geneLOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195K02.bB6Ng01-195K02.g
ACCGA018000GA018001
length947987
definitionB6Ng01-195K02.b B6Ng01-195K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,101,798 - 3,102,614)(3,300,758 - 3,301,743)
sequence
gaattctcaaatattcctataccatgcctgcctggatactgccatgctcc
agccttgatcataatggactgaacctctgaacctgtaagccagccccaat
taaatgctctccctctgttgccttggtcaaggtgtctcttcatagaaatg
aaaccctaactaagacagtatgtctgactacatacatgtcttattgttgt
tttgagatagggccttacaagataggccagactatagtcaaatttaccat
cctcttgcctcagccttctgagcagtataattaaaatacccattgccagc
ttgtacaatgttttctttttttttttccccattttttattaggtatttag
ctcatttacatttccaatgctataccaaaagtcccccatacccacccacc
cccactcccctacccgcccactccccccttttggccctggcgttcccctg
ttctggggcatataaagtttgtgtgtccaatgggcctctctttccagtga
tggccgactaggccatcttttgatacatatgcagctagagtcaagagctc
cggggtactgcttagttcataatgttgatccacctatagggttgcagatc
cctttagctccttgggtactttctctagctcctccattgggagccttgta
atccatccattagctgactgtgggcatccacttctgtgttttgctaggcc
ccagcatagtctcacaagagacagctacatctgggtcctttcgataaaat
cttgctagtgtatgcaatggtgtcagcgtttggatgctgattatgggggt
ggatccctggataaggcagtctctacatggtccatccctttcattctcag
ctccaaactttgtctctgtaacttccttccaaggggtgtttttgtttccc
acttctaaggaggggcatagtgtccacaacttcagtctttcattttt
gaattccctgcatcacatcaaacatgagctaacaatgtccttcaattctt
cttgcctgggccagctgatacatttcagagccagggagatggcagtaggg
tgtgaggcatatgtctacctatggtgcttgggaacagggacatagctgag
gagcccagcttgaagataactttcctgctctttcagggattcattagtgt
ctctagcaacacttcttcctcagatttctatttgggactaagcatggttt
ctcctggccctgtgccatcatctatgcaagtttactagtgtttatctaaa
tacaggatctactggaaggcataatcccaaccctccaccatctctaagga
ggaggagaggttgaagaggttggagaatctgacaatctccagaagatgac
aaatgggagggatgaactctggggaatcctggcccattacactaacaagg
atttgaacaacaacaggtagtcattatgcccagttctttgctatcttggg
ccctctctgttaacccaagatttcctcacatcacaggagactacaactcc
agagtgttctcatgcccaaaatcattttcctgattacatcttagatacag
aacttgaagttcagataggagtgagatggggtcacaggctcttttgattc
ccccaaaagtaaaccagagcctgtggcctgaatcacagtctgggaataag
ggtagaagtgtgtgagctctcatcctgcattttaagaagcctggacatgt
gttggcttatggaaattactaggtgctgtgtgcttatggcaaatcacttt
tgtaactgacctggaagtactttggttctaattggtcctgtcaacagctg
gagagttctggtcccacgtgctgcctctcagtgtgacagggatttctgca
ggtcactgcttttctctgattttgctcattgtactctgaattgtatttat
ttgggcattctaagtgtgtgtgtgtgtgttgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3101798_3102614
seq2: B6Ng01-195K02.b_41_859

seq1  GAATTCTCAAATATTCCTATACCATGCCTGCCTGGATACTGCCATGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATATTCCTATACCATGCCTGCCTGGATACTGCCATGCTCC  50

seq1  AGCCTTGATCATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGATCATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAAT  100

seq1  TAAATGCTCTCCCTCTGTTGCCTTGGTCAAGGTGTCTCTTCATAGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTCTCCCTCTGTTGCCTTGGTCAAGGTGTCTCTTCATAGAAATG  150

seq1  AAACCCTAACTAAGACAGTATGTCTGACTACATACATGTCTTATTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTAACTAAGACAGTATGTCTGACTACATACATGTCTTATTGTTGT  200

seq1  TTTGAGATAGGGCCTTACAAGATAGGCCAGACTATAGTCAAATTTACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATAGGGCCTTACAAGATAGGCCAGACTATAGTCAAATTTACCAT  250

seq1  CCTCTTGCCTCAGCCTTCTGAGCAGTATAATTAAAATACCCATTGCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCCTCAGCCTTCTGAGCAGTATAATTAAAATACCCATTGCCAGC  300

seq1  TTGTACAATGTTTTCTTTTTTTTTTTCCCCATTTTTTATTAGGTATTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAATGTTTTCTTTTTTTTTTTCCCCATTTTTTATTAGGTATTTAG  350

seq1  CTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACC  400

seq1  CCCACTCCCCTACCCGCCCACTCCCCCCTTTTGGCCCTGGCGTTCCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCCTACCCGCCCACTCCCCCCTTTTGGCCCTGGCGTTCCCCTG  450

seq1  TTCTGGGGCATATAAAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGCATATAAAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAGTGA  500

seq1  TGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  550

seq1  CGGGGTACTGCTTAGTTCATAATGTTGATCCACCTATAGGGTTGCAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTACTGCTTAGTTCATAATGTTGATCCACCTATAGGGTTGCAGATC  600

seq1  CCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCTTGTA  650

seq1  ATCCATCCATTAGCTGACTGTGGGCATCCACTTCTGTG-TTTGCTAGGCC  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCCATCCATTAGCTGACTGTGGGCATCCACTTCTGTGTTTTGCTAGGCC  700

seq1  CCAGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAAT  750

seq1  CTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTAT-GGGGT  798
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGGGGT  800

seq1  GGATCCCTGGATAAGGCAG  817
      |||||||||||||||||||
seq2  GGATCCCTGGATAAGGCAG  819

seq1: chr14_3300758_3301743
seq2: B6Ng01-195K02.g_64_1050 (reverse)

seq1  CACACACACACACACACACACACACTTAGAATG-CCAAATAAATACAATT  49
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  CACACACA-ACACACACACACACACTTAGAATGCCCAAATAAATACAATT  49

seq1  CAGAGTACAATGAGCAAAATCAGAGAAAAGCAGTGACCTGCAGAAAT-CC  98
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGAGTACAATGAGCAAAATCAGAGAAAAGCAGTGACCTGCAGAAATCCC  99

seq1  TGTCACACTGAGAGGCAGCACGTGGGACCAGAACTCTCCAGCTGTTGACA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACTGAGAGGCAGCACGTGGGACCAGAACTCTCCAGCTGTTGACA  149

seq1  GGACCAATTAGAACCAAAGTACTTCCAGGTCAGTTACAAAAGTGATTTGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAATTAGAACCAAAGTACTTCCAGGTCAGTTACAAAAGTGATTTGC  199

seq1  CATAAGCACACAGCACCTAGTAATTTCCATAAGCCAACACATGTCCAGGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCACACAGCACCTAGTAATTTCCATAAGCCAACACATGTCCAGGC  249

seq1  TTCTTAAAATGCAGGATGAGAGCTCACACACTTCTACCCTTATTCCCAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAAATGCAGGATGAGAGCTCACACACTTCTACCCTTATTCCCAGA  299

seq1  CTGTGATTCAGGCCACAGGCTCTGGTTTACTTTTGGGGGAATCAAAAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATTCAGGCCACAGGCTCTGGTTTACTTTTGGGGGAATCAAAAGAG  349

seq1  CCTGTGACCCCATCTCACTCCTATCTGAACTTCAAGTTCTGTATCTAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGACCCCATCTCACTCCTATCTGAACTTCAAGTTCTGTATCTAAGA  399

seq1  TGTAATCAGGAAAATGATTTTGGGCATGAGAACACTCTGGAGTTGTAGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCAGGAAAATGATTTTGGGCATGAGAACACTCTGGAGTTGTAGTC  449

seq1  TCCTGTGATGTGAGGAAATCTTGGGTTAACAGAGAGGGCCCAAGATAGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGATGTGAGGAAATCTTGGGTTAACAGAGAGGGCCCAAGATAGCA  499

seq1  AAGAACTGGGCATAATGACTACCTGTTGTTGTTCAAATCCTTGTTAGTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGGGCATAATGACTACCTGTTGTTGTTCAAATCCTTGTTAGTGT  549

seq1  AATGGGCCAGGATTCCCCAGAGTTCATCCCTCCCATTTGTCATCTTCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGCCAGGATTCCCCAGAGTTCATCCCTCCCATTTGTCATCTTCTGG  599

seq1  AGATTGTCAGATTCTCCAACCTCTTCAACCTCTCCTCCTCCTTAGAGATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTCAGATTCTCCAACCTCTTCAACCTCTCCTCCTCCTTAGAGATG  649

seq1  GTGGAGGGTTGGGATTATGCCTTCCAGTAGATCCTGTATTTAGATAAACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGGTTGGGATTATGCCTTCCAGTAGATCCTGTATTTAGATAAACA  699

seq1  CTAGTAAACTTGCATAGATGATGGCACAGGGCCAGGAGAAACCATGCTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAACTTGCATAGATGATGGCACAGGGCCAGGAGAAACCATGCTTA  749

seq1  GTCCCAAATAGAAATCTGAGGAAGAAGTGTTGCTAGAGACACTAATGAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAATAGAAATCTGAGGAAGAAGTGTTGCTAGAGACACTAATGAAT  799

seq1  CCCTGAAAGAGCAGGAAAGTTATCTTCAAGCTGGGCTCCTCAGCTATGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAAGAGCAGGAAAGTTATCTTCAAGCTGGGCTCCTCAGCTATGTC  849

seq1  CCTGTTCCCAAGCACCATAGGTAGACATATGCCTCACACCCTACTGCCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCCAAGCACCATAGGTAGACATATGCCTCACACCCTACTGCCAT  899

seq1  CTCCCTGGCTCTGAAATGTATCAGCTGGCCCAGGCAAGAAGAATTGAAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCTCTGAAATGTATCAGCTGGCCCAGGCAAGAAGAATTGAAGG  949

seq1  ACATTGTTAGCTCATGTTTGATGTGATGCAGGGAATTC  986
      ||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTAGCTCATGTTTGATGTGATGCAGGGAATTC  987