BAC Information

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BAC

Clone NameB6Ng01-196K23
Chromosome14 (Build37)
Map Location 50,336,513 - 50,337,683
singlet/doubletsinglet
Overlap gene3632451O06Rik
Upstream geneLOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream geneLOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196K23.bB6Ng01-196K23.g
ACCGA018756GA018757
length1,2201,147
definitionB6Ng01-196K23.b B6Ng01-196K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatttccaagatataaggtacaatttgctaaacacatgaaatcaaga
agaatgaagactgaagtgtggatactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcataccctagcaagattttattgaaag
gacccagatgtagctctctcttgtgagactatgccggggtctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaaagaacccaaggagctaaagggatctgccacccta
taggtggaacacattaatgaactaaccagtaccccaggagctcttgactc
tagctgcatatgtaacaaagatggtctaatcgtcaatcactggtaagaga
agtctcattggacagttaactttggtatgcctcagtacagggattgccag
gtcaaacgggattgattgagctaagggagtagattcatggcactgcagac
gtatcgtgacagccatgaca
gaattcactggaatacagcttgaaaatgttttaaccttttattaaccctt
tggtttttatacataagaatatcaacccactggacttcttgatcaacaga
gcagaaaatgtcagtggtaagagattaaaagcaagaaacaaaaaaggaaa
aacataaccaaaaagaaaaaaatggccacagagaattgacagtcttcatt
gttataagaaatactaggttctgaactatgaacaatgccataatcataga
tatagaatttcacattgttttacaaaaatatctgtctttatattaagcaa
atatataatatatgatatataatataatatataaacacttatattatatt
atattatattatattatattatattatattatacaaaagggttcatattc
tagatttcccagtggaagcaaggaggtagacctaaaagaatcagatgttt
gaactcaggagttatctgcagagatatgatttaattcaatgatcaattaa
gcttctttggtggtcaggaaattgctggaaaaaggatagagagatggata
cagtccatgccttcaaagcaatgcgttcaagggaaagtcctatcattgat
aagtcagaggagctatgtggccaggatgacaaaagattaatgaaagaatt
agttgagggtgacttttatcactgctcaaactcaagcaaagaattcactg
aattcccagaatttcaaagcaatgacctagtgactcaatgttgctgcacc
tgcctcattagccatcctttgtaaggttacaggcatccccctgcagctca
gacaaaaatacacttcttttattgagtctctaccactagatgtggatccc
caatctatttcattctctgtgatcaatgctcctgtggcttatgacgtcaa
tgatctctctagaagcatcgtttttgataacattgtctctagcctaggtt
ctccacctatagcgaatcaagcagtgtgtcaaacctgaatttctctgtac
tctctcagtcacagctcagctcgtgaccggaacagttacctccgcactgc
agatggagtggagcacttcaatggtttcatctgtgcactgattctcatca
ggcgagcaacctgtatctgcatccatgaagctctgcatctacttaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50336513_50337683
seq2: B6Ng01-196K23.g_65_1211

seq1  GAATTCACTGGAATACAGCTTGAAAATGTTTTAACCTTTTATTAACCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGAATACAGCTTGAAAATGTTTTAACCTTTTATTAACCCTT  50

seq1  TGGTTTTTATACATAAGAATATCAACCCACTGGACTTCTTGATCAACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTATACATAAGAATATCAACCCACTGGACTTCTTGATCAACAGA  100

seq1  GCAGAAAATGTCAGTGGTAAGAGATTAAAAGCAAGAAACAAAAAAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAATGTCAGTGGTAAGAGATTAAAAGCAAGAAACAAAAAAGGAAA  150

seq1  AACATAACCAAAAAGAAAAAAATGGCCACAGAGAATTGACAGTCTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAACCAAAAAGAAAAAAATGGCCACAGAGAATTGACAGTCTTCATT  200

seq1  GTTATAAGAAATACTAGGTTCTGAACTATGAACAATGCCATAATCATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAGAAATACTAGGTTCTGAACTATGAACAATGCCATAATCATAGA  250

seq1  TATAGAATTTCACATTGTTTTACAAAAATATCTGTCTTTATATTAAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAATTTCACATTGTTTTACAAAAATATCTGTCTTTATATTAAGCAA  300

seq1  ATATATAATATATGATATATAATATAATATATAAACACTTATATTATATT  350
      ||||||||||||||||||||||||||||||||||||||     |||||||
seq2  ATATATAATATATGATATATAATATAATATATAAACAC-----TTATATT  345

seq1  ATATTATATTATATTATATTATATTATATTATATTATACAAAAGGGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATTATATTATATTATATTATATTATATTATACAAAAGGGTTCA  395

seq1  TATTCTAGATTTCCCAGTGGAAGCAAGGAGGTAGACCTAAAAGAATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAGATTTCCCAGTGGAAGCAAGGAGGTAGACCTAAAAGAATCAGA  445

seq1  TGTTTGAACTCAGGAGTTATCTGCAGAGATATGATTTAATTCAATGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAACTCAGGAGTTATCTGCAGAGATATGATTTAATTCAATGATCA  495

seq1  ATTAAGCTTCTTTGGTGGTCAGGAAATTGCTGGAAAAAGGATAGAGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCTTCTTTGGTGGTCAGGAAATTGCTGGAAAAAGGATAGAGAGAT  545

seq1  GGATACAGTCCATGCCTTCAAAGCAATGCGTTCAAGGGAAAGTCCTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACAGTCCATGCCTTCAAAGCAATGCGTTCAAGGGAAAGTCCTATCA  595

seq1  TTGATAAGTCAGAGGAGCTATGTGGCCAGGATGACAAAAGATTAATGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGTCAGAGGAGCTATGTGGCCAGGATGACAAAAGATTAATGAAA  645

seq1  GAATTAGTTGAGGGTGACTTTTATCACTGCTCAAACTCAAGCAAAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTTGAGGGTGACTTTTATCACTGCTCAAACTCAAGCAAAGAATT  695

seq1  CACTGAATTCCCAGAATTTCAAAGCAATGACCTAGTGACTCAATGTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATTCCCAGAATTTCAAAGCAATGACCTAGTGACTCAATGTTGCT  745

seq1  GCACCTGCCTCATTAGCCATCCTTTGTAAGGTTACAGGCATCCCCCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCCTCATTAGCCATCCTTTGTAAGGTTACAGGCATCCCCCTGCA  795

seq1  GCTCAGACAAAAATACACTTCTTTTATTGAGTCTCTACCACTAGATGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACAAAAATACACTTCTTTTATTGAGTCTCTACCACTAGATGTGG  845

seq1  ATCCCCAATCTATTTCATTCTCTGTGATCAATGCTCCTGTGGCTTATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAATCTATTTCATTCTCTGTGATCAATGCTCCTGTGGCTTATGAC  895

seq1  GTCAATGATCTCTCTAGAAGCATCGTTTTTGATAACATTGTCTCTAGCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGATCTCTCTAGAAGCATCGTTTTTGATAACATTGTCTCTAGCCT  945

seq1  AGGTTCT-CACCTATAGCGAATCAAAGCAGTGGTGTCAAACCTGAATTTC  999
      ||||||| ||||||||||||||| ||||||| ||||||||||||||||||
seq2  AGGTTCTCCACCTATAGCGAATC-AAGCAGT-GTGTCAAACCTGAATTTC  993

seq1  TCTGTAACTTCTCT-TCAGTTCACAGCTCAGCTTCGTGGCCCG-ACAGTT  1047
      ||||||    |||| |||| |||||||||||| ||||| || | ||||||
seq2  TCTGTA----CTCTCTCAG-TCACAGCTCAGC-TCGTGACCGGAACAGTT  1037

seq1  ACCTCCGCACTGCAGGGTTGAAGTGGAGCACTTTCCAAATGGGTTTCATC  1097
      ||||||||||||||  | || ||||||||||||  |||   |||||||||
seq2  ACCTCCGCACTGCA--GATGGAGTGGAGCACTT--CAA--TGGTTTCATC  1081

seq1  TGTGCACTGATCCTTCATCAGGCAAGGCAAACACTGTTAAAACTGCATCC  1147
      ||||||||||| | ||||||||| | ||||   ||||   | ||||||||
seq2  TGTGCACTGATTC-TCATCAGGCGA-GCAA--CCTGT---ATCTGCATCC  1124

seq1  TATGGAGCTCTGCATCTACCTAAC  1171
       ||| |||||||||||||| ||||
seq2  -ATGAAGCTCTGCATCTACTTAAC  1147