BAC Information

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BAC

Clone NameB6Ng01-197D15
Chromosome14 (Build37)
Map Location 81,143,807 - 81,144,955
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh8, EG629734, Olfm4, LOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197D15.bB6Ng01-197D15.g
ACCGA019149GA019150
length1,0441,151
definitionB6Ng01-197D15.b B6Ng01-197D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagaacttcaaagaagagttaataccaatactcctcaaatt
attccacaaaatagaaacagaaagaacactacctaaaaccatttggctca
tgacttctgttagtttcactgtgtctgtttagtttctgtttcagtggtct
gtccattggtgagagtggggtgttaaaagtctcccacaattattgtgtga
ggtgcaatgtgtgctttgagctttagtaagtttctttttccttttctctt
tcttttttttttttctttgaaggtgtgtgtccttgcatttgtggcataga
tgttcaagactgagacttcctcttggtggatttttcctttgatgaatatg
aagtgtccttccccatcttgtttgataacttttggttgagagtatatttt
attggatattagagtgccaattccagcttgtttcttgggaccatttgcat
gcaaaagtttttttctagtctcttactctggggtagtgtctatctttctc
acttaagtttgtttgtttgtttgtttgtttgtttctttctttctttcttt
ctttcttctaaatattttcttcatttacatttcaaaatctatctcaaaag
tcccctgtaccctacccctgccctgcttcacccccccccccacacacaca
cactcccacttcctgaccctggcattcccctgtactggggcctataatct
tcataggagcaagggccttttcttccattgatgggcctactaggccatcc
tctgctacatattcaactagagacacaagctctgggggggtactagttag
tttcatattgttgttcctcctatagggttgcagaccccttttagctcctt
gagtactttctctagctcttccattgggggccctgtgttccatccaatag
atgactgtgaaggatcttacttctgtatttgccaaggcactggcataagc
cttcaaaaaagagagctattatcaagggttcttgtcagcaaaatcttgct
ggataatgcaataagtgctctggtttggtgaatattatatggga

gaattcactcataaacaagatattaggcactcactttctatgcctggctc
ctgaccaagcctgagctaggcttctcaaccttttaaacatagaaacaatc
aagccaagccatattacataagatgtcaatatacagtgtctgttaaaata
ggtattcatggtctgagattgaagtaataataatttgagctcaccattat
tgtaatagtttttttccataggtttatggctatcatacctatattacata
aggctataatcttcctatgtgttcttcttgtcccatctatttgtcttata
ctttgtttacatgggataatgttccaatcgcaacaaaatgtgtagatgag
tcatatagcgcgattaaaacgcttctaaaatgtcttaatgcctctatttg
gtgtttacatttctgtcttttcaatgtcgtgaaaacaaggaaaactctaa
gccacatctttctttctttaactttagtttacttatacattaaatgtttc
tttttattcatatcatgctgcccaatacttactagctgccataggtagtg
ttagtcttcgctggcaccaaaattttgtgagttttgctttgttttttata
tttttagtcatatttcaacgattatagccagatagtaattctctcacaga
acttgttcatgtattggtgactttatttaaggaggaatagtcctttaaaa
aaaaagatgtcttctccatctgcattgagaatgtgtccttttttgtagcc
agatcatcttttgtgcctcttctaatttcaattcatcatcaatcaagctg
cctcagtggttcttgagttcaaagatggtctgctgagaaattagggactt
agcatctcacacgtaaactgtctgttagtgaaatcagattatgcttccta
ctgaaatataatttgggatgttatttaaacagatgtagaatatattgcta
ttaaattcttttacatacaactgactaggtaccagggatgtcccatgtga
gcacattatcattcttcacagaacagaattgacttgttttataaaaatga
aacctttttatatctcatctcacataaatttaaataaaatttatggacat
tatgtgctttatctaatagccaaatattacgtacaactgatacacttaat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81143807_81144955
seq2: B6Ng01-197D15.g_70_1220 (reverse)

seq1  CATTAAGTGTATCAGTTGTACTGTAATATTT-GCTATTAGATAAAGCACA  49
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  CATTAAGTGTATCAGTTGTAC-GTAATATTTGGCTATTAGATAAAGCACA  49

seq1  TTATTCTCCAATAAATTTTTATTTAATTTTATGTGAGATGAGATATAAAA  99
       || | ||| ||||| |||||||||| |||||||||||||||||||||||
seq2  -TAATGTCC-ATAAA-TTTTATTTAAATTTATGTGAGATGAGATATAAAA  96

seq1  AGGTTTCATTTTTATAAAACAAGTCAATTCTGTTCTGTGAAG-ATGAT-A  147
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  AGGTTTCATTTTTATAAAACAAGTCAATTCTGTTCTGTGAAGAATGATAA  146

seq1  TGTGCTCACATTGTGACATCCCTGGTACCTAGTCAGTTGTATGT-AAAGA  196
      |||||||||| || |||||||||||||||||||||||||||||| |||||
seq2  TGTGCTCACA-TGGGACATCCCTGGTACCTAGTCAGTTGTATGTAAAAGA  195

seq1  ATTT-ATAGCAATATATTCTACATCTGTTT-AATAACAT-CCAAATTATA  243
      |||| ||||||||||||||||||||||||| |||||||| ||||||||||
seq2  ATTTAATAGCAATATATTCTACATCTGTTTAAATAACATCCCAAATTATA  245

seq1  TTTCAGTAGGAAGCATAATCTGATTTCACTAACAGACAGTTTACGTGTGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAGGAAGCATAATCTGATTTCACTAACAGACAGTTTACGTGTGA  295

seq1  GATGCTAAGTCCCTAATTTCTCAGCAGACCATCTTTGAACTCAAGAACCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAAGTCCCTAATTTCTCAGCAGACCATCTTTGAACTCAAGAACCA  345

seq1  CTGAGGCAGCTTGATTGATGATGAATTGAAATTAGAAGAGGCACAAAAGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCAGCTTGATTGATGATGAATTGAAATTAGAAGAGGCACAAAAGA  395

seq1  TGATCTGGCTACAAAAAAGGACACATTCTCAATGCAGATGGAGAAGACAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGCTACAAAAAAGGACACATTCTCAATGCAGATGGAGAAGACAT  445

seq1  CTTTTTTTTTAAAGGACTATTCCTCCTTAAATAAAGTCACCAATACATGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTAAAGGACTATTCCTCCTTAAATAAAGTCACCAATACATGA  495

seq1  ACAAGTTCTGTGAGAGAATTACTATCTGGCTATAATCGTTGAAATATGAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTCTGTGAGAGAATTACTATCTGGCTATAATCGTTGAAATATGAC  545

seq1  TAAAAATATAAAAAACAAAGCAAAACTCACAAAATTTTGGTGCCAGCGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATAAAAAACAAAGCAAAACTCACAAAATTTTGGTGCCAGCGAA  595

seq1  GACTAACACTACCTATGGCAGCTAGTAAGTATTGGGCAGCATGATATGAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACACTACCTATGGCAGCTAGTAAGTATTGGGCAGCATGATATGAA  645

seq1  TAAAAAGAAACATTTAATGTATAAGTAAACTAAAGTTAAAGAAAGAAAGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAACATTTAATGTATAAGTAAACTAAAGTTAAAGAAAGAAAGA  695

seq1  TGTGGCTTAGAGTTTTCCTTGTTTTCACGACATTGAAAAGACAGAAATGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTAGAGTTTTCCTTGTTTTCACGACATTGAAAAGACAGAAATGT  745

seq1  AAACACCAAATAGAGGCATTAAGACATTTTAGAAGCGTTTTAATCGCGCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAAATAGAGGCATTAAGACATTTTAGAAGCGTTTTAATCGCGCT  795

seq1  ATATGACTCATCTACACATTTTGTTGCGATTGGAACATTATCCCATGTAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTCATCTACACATTTTGTTGCGATTGGAACATTATCCCATGTAA  845

seq1  ACAAAGTATAAGACAAATAGATGGGACAAGAAGAACACATAGGAAGATTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTATAAGACAAATAGATGGGACAAGAAGAACACATAGGAAGATTA  895

seq1  TAGCCTTATGTAATATAGGTATGATAGCCATAAACCTATGGAAAAAAACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTATGTAATATAGGTATGATAGCCATAAACCTATGGAAAAAAACT  945

seq1  ATTACAATAATGGTGAGCTCAAATTATTATTACTTCAATCTCAGACCATG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATAATGGTGAGCTCAAATTATTATTACTTCAATCTCAGACCATG  995

seq1  AATACCTATTTTAACAGACACTGTATATTGACATCTTATGTAATATGGCT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTATTTTAACAGACACTGTATATTGACATCTTATGTAATATGGCT  1045

seq1  TGGCTTGATTGTTTCTATGTTTAAAAGGTTGAGAAGCCTAGCTCAGGCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGATTGTTTCTATGTTTAAAAGGTTGAGAAGCCTAGCTCAGGCTT  1095

seq1  GGTCAGGAGCCAGGCATAGAAAGTGAGTGCCTAATATCTTGTTTATGAGT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGAGCCAGGCATAGAAAGTGAGTGCCTAATATCTTGTTTATGAGT  1145

seq1  GAATTC  1149
      ||||||
seq2  GAATTC  1151


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